GBrowse Details

Vigan.08G095600.01

Basic Information:
Name: Vigan.08G095600.01
Multiple alignment
Variant Information
Position: Chr08:8029376..8031132 (- strand)
Length: 1757
Functional Information:
Description: Similar to Uncharacterized protein. [I1LDB6, Glycine max]
GO: Biological Process: purine ribonucleoside salvage (GO:0006166)
Biological Process: nucleoside metabolic process (GO:0009116)
Cellular Component: cytoplasm (GO:0005737)
Molecular Function: hypoxanthine phosphoribosyltransferase activity (GO:0004422)
InterPro: Phosphoribosyltransferase domain (IPR000836)
Hypoxanthine phosphoribosyl transferase (IPR005904)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:18.26,21.84,8.32,7.60,26.93,16.20,18.01,7.16
Arabidopsis thaliana homolog: AT1G71750.2
Automatic updates:
Name: NM_001249538 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max hypoxanthine-guanine phosphoribosyltransferase-like (LOC100037484), mRNA.
PubMed ID: 17635220 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr08:8029376..8029582 (- strand)
Length: 207
Type: three_prime_UTR
Position: Chr08:8029583..8029681 (- strand)
Length: 99
Type: CDS
Position: Chr08:8030163..8030327 (- strand)
Length: 165
Type: CDS
Position: Chr08:8030681..8030986 (- strand)
Length: 306
Type: CDS
Position: Chr08:8030987..8031132 (- strand)
Length: 146
Type: five_prime_UTR

>Vigan.08G095600.01 class=Sequence position=Chr08:8029376..8031132 (- strand)
GTCAGGTTGA TTATTTTAAT AAAATTCTAA TAAATTATAG AAAAGAAGGT TGAAAAAGAT ATCTAACTTT CTTCAAATAG
AAAGAGGAAA CGGTAGAGAA TCTGAAAAAC CCTAGCAGTT GTAAAACATC CCATAAACCC TCTCTAATGA ACACGACCAT
GCATTCCCAC ATTGAGACAA TTCTGTGGAG CGAGGACCAA ATTTCTCGCC GTGTCTCGGA GCTTGCCGCC GAAGTTTCCG
CTGACTTTGC TGGTTGTTCT CGAGCGCCCA TAGTCGTGGG TGTTGCCACG GGTGCCTTCC TCTTCTTGGC AGATTTTGTT
CGCAAAATCG ACTTCTCAGT ATCCGTTGAT TTCGTCCGAG CTGAATCCTA CGGTTCAGGA ACAGAATCCA ATGGCGCACC
CACCATTTCC TTGGATTTGA AGGTCGACAT CAACGCTCGT CATGTCATCT TGGTATTCCT CTTTTTTCCT CCTCTCACCC
CTCAATGTCA CTGTTTTCAA ATTGAAATAA AACTAATACA TTGTATTTTC AAATGAGAGT AATTAGTTAG TCCACGTCCG
AGCTGAATTT CTTTTTCTGT TGTTTGATAG TGTATTTTTT TTCTTCGAAC TCAAATCCCC TATGGTACTT TTTATATTAT
ACAAGGTTGT ACGAGCTTAA ATGGAGAATC AAAAAGCTAT ACAACAATTT TTTTTTTTAC AAATTAGTTA TACTTTTTTT
TTTCCATTTT TCTTTGATTA TCAAGAGACT GCGGAGAAAT TACTCTAAAT TGTTATACAT GTTTTAATCA TGGATTGATA
ATTAGGTTGA AGACATTGTA GATACTGGTC ATACCTTATC TAGAGTCATT AAGCACTTGA AATCAAAAGG AGCATCCTCT
GTTTCTGTGT GCACTTTTCT TGATAAACCT GCAAGGAGAA AAGTAAATGT TCAGCTGGTG GGTGAAGGAA AATTCTACCG
TGGATTTGAG GTATGATGCA TGTTTTTGGG TTTTTACAAG TATAGATTCT TTTTCGCACA CCAATACATG CCAATGAGCT
TCATATATAT CATATAGCTG TTGAACTTAA ACACAATGTT CTTAATTTCT ATTGAGACTG ACTTGGATAA ACGTATCAAG
TATTTTATTT TAACATAGAT TCTCATTTTA AGTGCTTTTG GGAAATTTAT CCAAAAGTTT ACCTTGTTCT AGTATCAATG
GCCAGTTAAC CTTTGGGTTG GAAATGTATT ATAGATATGT AGCAGTTATG ATAAATTTGG TTTTCAATTT TTTTTGCTGT
AGCTGATTCT TTAATCCCTA GATAATTTTA GCACGAGTCT GGATATTATG CTCTAAGCAG AAATAGTGAC TGTACTTATG
GCACTGACAT GAAGTGGTAT GGTCTAATTA CGAAGCAGAA TGAGTTGGGA GTGATATCTA CTGATTCTGT CTACTTTTGT
GTTGTATGCA GTGCCCAGAC TGTTTTGTTG TTGGTTATGG AATGGATTTT GCCGAACACT ATAGAAATTT TCCTTACATT
GGTGTTTTGA AGCCTGAACT TTACGAGTGA TCTTATTTAT ATCCCTTAGT GAGCACTTGT CCCAAATGGA ACCTTAAGAG
TGTTTAACAC GGTACACTTG ATTCACAGAT AGAACGGAAA ATAGAAGAAA TGAATCTGCT TTCTGGTTTC CATGTTTATC
ACAAAATAAA CTGTTTCGGA GCTTTACAGA ATTGTTCACA CCATTATATT ATTATACAGT GTACTTGAAA ACTAGCA

>Vigan.08G095600.01
GTCAGGTTGA TTATTTTAAT AAAATTCTAA TAAATTATAG AAAAGAAGGT TGAAAAAGAT ATCTAACTTT CTTCAAATAG
AAAGAGGAAA CGGTAGAGAA TCTGAAAAAC CCTAGCAGTT GTAAAACATC CCATAAACCC TCTCTAATGA ACACGACCAT
GCATTCCCAC ATTGAGACAA TTCTGTGGAG CGAGGACCAA ATTTCTCGCC GTGTCTCGGA GCTTGCCGCC GAAGTTTCCG
CTGACTTTGC TGGTTGTTCT CGAGCGCCCA TAGTCGTGGG TGTTGCCACG GGTGCCTTCC TCTTCTTGGC AGATTTTGTT
CGCAAAATCG ACTTCTCAGT ATCCGTTGAT TTCGTCCGAG CTGAATCCTA CGGTTCAGGA ACAGAATCCA ATGGCGCACC
CACCATTTCC TTGGATTTGA AGGTCGACAT CAACGCTCGT CATGTCATCT TGGTTGAAGA CATTGTAGAT ACTGGTCATA
CCTTATCTAG AGTCATTAAG CACTTGAAAT CAAAAGGAGC ATCCTCTGTT TCTGTGTGCA CTTTTCTTGA TAAACCTGCA
AGGAGAAAAG TAAATGTTCA GCTGGTGGGT GAAGGAAAAT TCTACCGTGG ATTTGAGTGC CCAGACTGTT TTGTTGTTGG
TTATGGAATG GATTTTGCCG AACACTATAG AAATTTTCCT TACATTGGTG TTTTGAAGCC TGAACTTTAC GAGTGATCTT
ATTTATATCC CTTAGTGAGC ACTTGTCCCA AATGGAACCT TAAGAGTGTT TAACACGGTA CACTTGATTC ACAGATAGAA
CGGAAAATAG AAGAAATGAA TCTGCTTTCT GGTTTCCATG TTTATCACAA AATAAACTGT TTCGGAGCTT TACAGAATTG
TTCACACCAT TATATTATTA TACAGTGTAC TTGAAAACTA GCA

>Vigan.08G095600.01
ATGAACACGA CCATGCATTC CCACATTGAG ACAATTCTGT GGAGCGAGGA CCAAATTTCT CGCCGTGTCT CGGAGCTTGC
CGCCGAAGTT TCCGCTGACT TTGCTGGTTG TTCTCGAGCG CCCATAGTCG TGGGTGTTGC CACGGGTGCC TTCCTCTTCT
TGGCAGATTT TGTTCGCAAA ATCGACTTCT CAGTATCCGT TGATTTCGTC CGAGCTGAAT CCTACGGTTC AGGAACAGAA
TCCAATGGCG CACCCACCAT TTCCTTGGAT TTGAAGGTCG ACATCAACGC TCGTCATGTC ATCTTGGTTG AAGACATTGT
AGATACTGGT CATACCTTAT CTAGAGTCAT TAAGCACTTG AAATCAAAAG GAGCATCCTC TGTTTCTGTG TGCACTTTTC
TTGATAAACC TGCAAGGAGA AAAGTAAATG TTCAGCTGGT GGGTGAAGGA AAATTCTACC GTGGATTTGA GTGCCCAGAC
TGTTTTGTTG TTGGTTATGG AATGGATTTT GCCGAACACT ATAGAAATTT TCCTTACATT GGTGTTTTGA AGCCTGAACT
TTACGAGTGA 

>Vigan.08G095600.01
MNTTMHSHIE TILWSEDQIS RRVSELAAEV SADFAGCSRA PIVVGVATGA FLFLADFVRK IDFSVSVDFV RAESYGSGTE
SNGAPTISLD LKVDINARHV ILVEDIVDTG HTLSRVIKHL KSKGASSVSV CTFLDKPARR KVNVQLVGEG KFYRGFECPD
CFVVGYGMDF AEHYRNFPYI GVLKPELYE*