GBrowse Details

Vigan.08G094600.01

Basic Information:
Name: Vigan.08G094600.01
Multiple alignment
Variant Information
Position: Chr08:7939648..7943747 (+ strand)
Length: 4100
Functional Information:
Description: Similar to Uncharacterized protein. [Q42810, Glycine max]
GO: Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase-like domain (IPR011009)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:234.59,49.77,17.80,25.89,2.31,8.19,61.04,13.50
Automatic updates:
Name: NM_001248411 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max choline kinase (LOC547866), mRNA.
PubMed ID: 8934624 NCBI(pubmed)
Status: Known Variant
Name: NM_001255050 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ethanolamine kinase 2-like (LOC100799515), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:7939648..7939706 (+ strand)
Length: 59
Type: five_prime_UTR
Position: Chr08:7939707..7940060 (+ strand)
Length: 354
Type: CDS
Position: Chr08:7941785..7941906 (+ strand)
Length: 122
Type: CDS
Position: Chr08:7941990..7942185 (+ strand)
Length: 196
Type: CDS
Position: Chr08:7942388..7942505 (+ strand)
Length: 118
Type: CDS
Position: Chr08:7942616..7942663 (+ strand)
Length: 48
Type: CDS
Position: Chr08:7942963..7943063 (+ strand)
Length: 101
Type: CDS
Position: Chr08:7943194..7943343 (+ strand)
Length: 150
Type: CDS
Position: Chr08:7943344..7943747 (+ strand)
Length: 404
Type: three_prime_UTR

>Vigan.08G094600.01 class=Sequence position=Chr08:7939648..7943747 (+ strand)
GAAAGCACTT AACCAAAATC TGTTTCAGCT TCCTCTGTTT TGGGTTCTGT TTTTCGACGA TGGCCATCAA GACAATTGAA
CTGTTGAAAG GATGCGGATC GCAGGAAGAG ATAATGGAAG TGCTTGCTGC GGTGGCGTCG GATATGGGTG ATGTGATCGA
TGATGTGAGC AGCTTGCAGG TGATTCCACT GAAGGGTGCA ATGACCAATG AGGTTTTCCA GGTAAAATGG CCTTCTAAAA
ATGGTGGTGA AGTCAGAAAG GTTCTGGTTC GTTTATATGG GGAAGGTGTT GAAGTTTTCT TCGACAGGGA AGAAGAAGTG
AAAACCTTTG AGTGCATTTC AAAGCATGGT CAAGGACCTC GCCTTCTTGG TCGTTTCACT TCTGGTAGAG TTGAGGAGTT
TATTCATGCC AGAGTATGTT CTTATCTTCT TTCTTTTTTA ATATTTCCAT TTTTTTTAAA AAGGACACGA TTGTTACATG
CCCTCAGAAA GTTATCCTTG CTGACGAGAT CAAATAGTTG GAGTTGAATT TTGATCCATT AAAAAGTTAA CTTGGTGATC
CGGTAACGAC ATAGAAAAGA ATTTGCAATT TAATGCATTT TAGATAATTT TTATTTTTAT ATATATGGTT ATTTAATGTT
TCTTAATGAT GTGTTAATGT GTAATTGGAT GAATGAAAAG GAGCTTAACA TTAAAAACTG TATGCAACTG GATGACTGAG
TCATCCAAAT TGGCTGAGTT TCAACGCCTT TTTGGCACCG TTGTTGGCTG GTTGTCTAAA TACAAAAACT CTCCTTGAAA
AATAAGCCAT ATGTGACCCC AGCATAAAAC TACCTCTACG ACCATAAACT TTAGTGTCTA TGTATGAAAC ACAATATTTT
AATTTGCTTC ACTTATTGTA AACATTCACA CTTACCAATA CTTTTTCCAT TTATTTTGCG TATTTAGTAT TGATACTTTT
AGATACTTCA TTAACAAGCA TTTGTGAAAC TTCTATGCAT TTACGGTATT TAAATCTCAT AAATAAAACT ACATGAATCA
TATATTTGTA ATGTAAAAAT ATTATTTCTT CATAAATCAA ATAAGGATAT ACGTAAATGA TATAAAGGAA TTTATATTAA
TAATTATTTT TTCCGTGTAG TGTCTAATAA ATAAGTTTTC AATTTGAATT CGAGGAATAT ATATATTCCA AGTATCGTAT
CTTGCTCTCT TTATATCGTG TATTCTATGC GTGTATCAGT GGTTGCAATG ATTATTACAA CTGGTGCTTG ATCTTTAGAG
AGTATATGCT GAGTTTGAAA GTAAATTAAC TTTTTGTTCT CCATTCTGCT TTTTTTCTGT AGTCAAAAAG CTTTTCTTTA
GGCTGATGCT CTTTCTTTTT CGTATTTGGA GCAATGGAGG GTTACCAATA ACATTACCTG TTTAGGATTA ATAATTAAGA
AGCATCTTTT AGAAATTCAT TTGAATGGTG TTGAGTCAGT GGGATCTGGT GCTCTTAGCC ACTGCCTTTA TCATTCTTCC
TACTACTTTG CAAAATGTTA TTTTCTCTAT TAGAAATAAA GAAACACAAT AAAACATCGA TGTTACTTGG AATAAGCATC
TGGATTTTTG TATGCATACC TGAAAATATC AGACTTGGGA TGTCATATTT CCTCTCACCC TAGCTTCGTA GTTTTGCAAT
TAAGTAGCTG CCAAAAAAAT GTTGTCACCT TTGTTTCGGA CACTTCTGGA TGGATTGAAG AGTTCAACCC AAAAGGGCAC
TTTCATCTTC TGTTATCTCT GCATTAACAG TGTCATTCAG AGATTTAATC ATGTGTGTCC ACTCAAGCCT GTCTATTTAT
GAAGTTTTTT TTTCTTTTTA TATCTAGGAC AAATTTGTCC ACATATTACG AAAATATATA AGTCAAAAAA ATATTATATT
ACGGATAAGT GGTGTAGATT CAGGATGACT TTAAAAGCAA AGTCGTGAAG ACTCCAAACA ACTTCTTTGT GAATTTTTGA
AAAAGTGAAC TCCTCATGAT TTCAGTAGAA AAGAATCGAA CAAGTGAAGA TGATGAGTTA TACATGCAGT GTTATTTATG
TTCCTAGTAC AATGGTTGTG TATAACATGT CTGTTTTTTT TATCTTCCTT TTTTAAGACT CTCTCAGCTG CTGACCTGCG
TGACCCTGAA GTATCTGCTT TGGTAGCATC TAAGATGAGA GAGTTCCATA ATCTTCACAT GCCTGGTGCT AAGAAGGCTC
AAATTTGGCA AAGATTGAGG TAACTATTGG TCAGATCATT CTTAACATCC TTTTTCATTT CTATGTTGAA TATTAAACAC
TGTCTCTTGT GTTATTTCCT AGGAATTGGC TTGGCCAAGC CAAGAGTCTG TGCTCTCCAA AGGATGCAAA AAATTTTGGC
TTGGACAATC TGGATGAGGA AATAAACATA CTGGAGAAGA AGTTATCTGA AGGATATCAA GAGATTGGCT TCTGTCACAA
TGATCTACAG TATGGTAACA TAATGATGGA GGAGGAGACA AGATTAATCA CTATAATTGT AAGTTCCGGT CATATATTCT
TTGCCTCTGT TATTTCTGGT GTCCTTGAAA ATTTGTGCAT GATAATAAGA CTTACGAACA CTTTCTGTAT CAACTTTGAG
ACATACTTTT ACAGGCACTT GTCATCTTTT ATCGATCATA TAAATATTAT TGCAAACTTA CCTTTTGTTG TTGTTTTTTT
AATTTCTTTT CATTATACAG GACTATGAAT ATGCAAGTTA TAATCCTATT GCTTATGACA TAGCAAATCA TTTTTGCGAA
ATGGTAGCTG ATTACCACAG TGACACACCT CATGTTCTTG ACTTCAAGAA ATATCCAGGT AAAGTTCTTG TTTGTAAATT
CTTTGCTGCA TAAATTACAT TTCCACAATG ATTAATTACT GAAATCACTC TGAATTGCTG ACACACCAAA TTGGATATGA
TAAACCAGGA CTAGAGGAAC GTCAAAGATT TATCCGCATC TATCTGAGTT CTGAAGGTTA GTCCACTAAT TTGACCACTC
ATGATTCTCA TAAATCTGAA TATAGATAAC TGCTATTAAT CTACCCCCTG ATGATAAAAA CCCTCAAAGA AATTAATAAT
TAGAACGTTT TATCTTTACA CAGTTTAAGT AGTTATTAGC TTATTTTATT CTGAGCTCAT TATCTCTTCA ATGTATGTAT
GAATGTGATG TCTCATTCGC TCTTCAACTT GTGTTGTCAA AATCATGTTA TGGAAGTTGA AATTTCTAAA TGTCGTAAGT
CCCTCAAATT TATTTTGGCA ATTCCTTGTA CACAGGCAAT AGACCAAGCA ATGCTAAAGT GAACCAGTTA GTGAAAGCAA
CTGAAAACTA CACTGCAGCA AACCATATAT TTTGGGGTTT GTGGGGACTC ATTTCGGTAA GTTTTTGTTT TATTTGAATT
TGGTTACTTG TGCCTAATAT GAAGGTAAAG GTATACACAC TTTTTTTAAT GGATCAGCAA AGAAGGTATA GATACACTAA
CATAGATGTT ATGCATGCAC ATGCAGAGTT ATGTGAATAA AATAGACTTT GACTATAAGG AGTATGCAAG GCAGAGGTTT
CAGCAATACT GGTTAAGGAA GGCTAATTTA TTGGACTCGC CAAGCATCGT TTCCCAAGAC CAAACTCTGA ATGAATCTCT
ACCATCTTTC ACGTGATTTT GCTTCAGTTG CTTACTGAAG TTTAGTCTTA GTATTATACT ATATAGTATA GTATATATAT
GAATAACACC TAAGATATAT GACATGCACC ATCTATATGT AAATTTATTT AATCAGCATG AATGTGTAAT TTTTATGAAT
CCGTCACTTT TGGAGTGAGT TGAGAGATAT GCAGTCTATG TATTGTTTGC AATAATGATG GCATATGCAT ATATACAGAA
CAGATGGATT TGTCTTCTCA TCTTTACACA TTAACTGAGG TTATTATGAT CTGAAATTAG TCACTCTGAC ATGGAATATT
TATACATGTC TCTTGCATAT TCTTGAAATC TATTTTCAAT AGTTCCTCTC ATCTAATATG CTTACCATCC TCTCCTCCTT
ATCTTCAAAC TGTAATCCAT 

>Vigan.08G094600.01
GAAAGCACTT AACCAAAATC TGTTTCAGCT TCCTCTGTTT TGGGTTCTGT TTTTCGACGA TGGCCATCAA GACAATTGAA
CTGTTGAAAG GATGCGGATC GCAGGAAGAG ATAATGGAAG TGCTTGCTGC GGTGGCGTCG GATATGGGTG ATGTGATCGA
TGATGTGAGC AGCTTGCAGG TGATTCCACT GAAGGGTGCA ATGACCAATG AGGTTTTCCA GGTAAAATGG CCTTCTAAAA
ATGGTGGTGA AGTCAGAAAG GTTCTGGTTC GTTTATATGG GGAAGGTGTT GAAGTTTTCT TCGACAGGGA AGAAGAAGTG
AAAACCTTTG AGTGCATTTC AAAGCATGGT CAAGGACCTC GCCTTCTTGG TCGTTTCACT TCTGGTAGAG TTGAGGAGTT
TATTCATGCC AGAACTCTCT CAGCTGCTGA CCTGCGTGAC CCTGAAGTAT CTGCTTTGGT AGCATCTAAG ATGAGAGAGT
TCCATAATCT TCACATGCCT GGTGCTAAGA AGGCTCAAAT TTGGCAAAGA TTGAGGAATT GGCTTGGCCA AGCCAAGAGT
CTGTGCTCTC CAAAGGATGC AAAAAATTTT GGCTTGGACA ATCTGGATGA GGAAATAAAC ATACTGGAGA AGAAGTTATC
TGAAGGATAT CAAGAGATTG GCTTCTGTCA CAATGATCTA CAGTATGGTA ACATAATGAT GGAGGAGGAG ACAAGATTAA
TCACTATAAT TGACTATGAA TATGCAAGTT ATAATCCTAT TGCTTATGAC ATAGCAAATC ATTTTTGCGA AATGGTAGCT
GATTACCACA GTGACACACC TCATGTTCTT GACTTCAAGA AATATCCAGG ACTAGAGGAA CGTCAAAGAT TTATCCGCAT
CTATCTGAGT TCTGAAGGCA ATAGACCAAG CAATGCTAAA GTGAACCAGT TAGTGAAAGC AACTGAAAAC TACACTGCAG
CAAACCATAT ATTTTGGGGT TTGTGGGGAC TCATTTCGAG TTATGTGAAT AAAATAGACT TTGACTATAA GGAGTATGCA
AGGCAGAGGT TTCAGCAATA CTGGTTAAGG AAGGCTAATT TATTGGACTC GCCAAGCATC GTTTCCCAAG ACCAAACTCT
GAATGAATCT CTACCATCTT TCACGTGATT TTGCTTCAGT TGCTTACTGA AGTTTAGTCT TAGTATTATA CTATATAGTA
TAGTATATAT ATGAATAACA CCTAAGATAT ATGACATGCA CCATCTATAT GTAAATTTAT TTAATCAGCA TGAATGTGTA
ATTTTTATGA ATCCGTCACT TTTGGAGTGA GTTGAGAGAT ATGCAGTCTA TGTATTGTTT GCAATAATGA TGGCATATGC
ATATATACAG AACAGATGGA TTTGTCTTCT CATCTTTACA CATTAACTGA GGTTATTATG ATCTGAAATT AGTCACTCTG
ACATGGAATA TTTATACATG TCTCTTGCAT ATTCTTGAAA TCTATTTTCA ATAGTTCCTC TCATCTAATA TGCTTACCAT
CCTCTCCTCC TTATCTTCAA ACTGTAATCC AT

>Vigan.08G094600.01
ATGGCCATCA AGACAATTGA ACTGTTGAAA GGATGCGGAT CGCAGGAAGA GATAATGGAA GTGCTTGCTG CGGTGGCGTC
GGATATGGGT GATGTGATCG ATGATGTGAG CAGCTTGCAG GTGATTCCAC TGAAGGGTGC AATGACCAAT GAGGTTTTCC
AGGTAAAATG GCCTTCTAAA AATGGTGGTG AAGTCAGAAA GGTTCTGGTT CGTTTATATG GGGAAGGTGT TGAAGTTTTC
TTCGACAGGG AAGAAGAAGT GAAAACCTTT GAGTGCATTT CAAAGCATGG TCAAGGACCT CGCCTTCTTG GTCGTTTCAC
TTCTGGTAGA GTTGAGGAGT TTATTCATGC CAGAACTCTC TCAGCTGCTG ACCTGCGTGA CCCTGAAGTA TCTGCTTTGG
TAGCATCTAA GATGAGAGAG TTCCATAATC TTCACATGCC TGGTGCTAAG AAGGCTCAAA TTTGGCAAAG ATTGAGGAAT
TGGCTTGGCC AAGCCAAGAG TCTGTGCTCT CCAAAGGATG CAAAAAATTT TGGCTTGGAC AATCTGGATG AGGAAATAAA
CATACTGGAG AAGAAGTTAT CTGAAGGATA TCAAGAGATT GGCTTCTGTC ACAATGATCT ACAGTATGGT AACATAATGA
TGGAGGAGGA GACAAGATTA ATCACTATAA TTGACTATGA ATATGCAAGT TATAATCCTA TTGCTTATGA CATAGCAAAT
CATTTTTGCG AAATGGTAGC TGATTACCAC AGTGACACAC CTCATGTTCT TGACTTCAAG AAATATCCAG GACTAGAGGA
ACGTCAAAGA TTTATCCGCA TCTATCTGAG TTCTGAAGGC AATAGACCAA GCAATGCTAA AGTGAACCAG TTAGTGAAAG
CAACTGAAAA CTACACTGCA GCAAACCATA TATTTTGGGG TTTGTGGGGA CTCATTTCGA GTTATGTGAA TAAAATAGAC
TTTGACTATA AGGAGTATGC AAGGCAGAGG TTTCAGCAAT ACTGGTTAAG GAAGGCTAAT TTATTGGACT CGCCAAGCAT
CGTTTCCCAA GACCAAACTC TGAATGAATC TCTACCATCT TTCACGTGA

>Vigan.08G094600.01
MAIKTIELLK GCGSQEEIME VLAAVASDMG DVIDDVSSLQ VIPLKGAMTN EVFQVKWPSK NGGEVRKVLV RLYGEGVEVF
FDREEEVKTF ECISKHGQGP RLLGRFTSGR VEEFIHARTL SAADLRDPEV SALVASKMRE FHNLHMPGAK KAQIWQRLRN
WLGQAKSLCS PKDAKNFGLD NLDEEINILE KKLSEGYQEI GFCHNDLQYG NIMMEEETRL ITIIDYEYAS YNPIAYDIAN
HFCEMVADYH SDTPHVLDFK KYPGLEERQR FIRIYLSSEG NRPSNAKVNQ LVKATENYTA ANHIFWGLWG LISSYVNKID
FDYKEYARQR FQQYWLRKAN LLDSPSIVSQ DQTLNESLPS FT*