GBrowse Details

Vigan.08G093900.01

Basic Information:
Name: Vigan.08G093900.01
Multiple alignment
Variant Information
Position: Chr08:7842014..7849061 (- strand)
Length: 7048
Functional Information:
Description: Similar to Low affinity potassium transport system protein kup isoform 1. [XP_007019590.1, Theobroma cacao]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:16.55,11.91,11.54,13.71,5.44,15.94,11.30,14.71
Arabidopsis thaliana homolog: AT1G22790.1
Automatic updates:
Name: BT092279 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-10F3 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001369299 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527436 (LOC100527436), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:7842014..7842654 (- strand)
Length: 641
Type: three_prime_UTR
Position: Chr08:7842655..7842724 (- strand)
Length: 70
Type: CDS
Position: Chr08:7847429..7847982 (- strand)
Length: 554
Type: CDS
Position: Chr08:7847983..7849061 (- strand)
Length: 1079
Type: five_prime_UTR

>Vigan.08G093900.01 class=Sequence position=Chr08:7842014..7849061 (- strand)
TTGCGCACAT TAAAGAATAG GGTCACGTCG CTATCATGCG CCGTGTGGGT CACTGTCCTA TTCTCCTTTT AAATAATTGA
AACCAGAAGA AAAATATACA TAATCGGATT TTTTTCCTTC TTATTCATCG TTCAATTCAA TCACTCGCCG AGTTTTCGTC
CGGATGCTCC GAATCGTTGC TGTCCATCCA CGCGCCGGCG ACCTTCCGTT CTGATTCTCG GTACTGTAAA CTCGTTCCTT
CTTCTTCGAT CTAGGATTTG CAGTTTGTTT CTCGGAGAAG TGTTGGAAAA CCGACACTTC GAAATCTCGC TCTGCGTTGT
TCGATTTGAG TGTGATTTCA GCGTGCTCGG GGCTCGGTGT TTCTGATTTT CTTTCTCATG CATTTTCAAG TAACTCAGAA
GCTTTCTTTT CTTTTATCTT ACCTTTTTTT GGATTTAGCA ATTTAATTTG GTTTCTTGGA TTTTTTTTAT TGTGTTCGAG
AAATTGCGCA CTAACGTATT TTCGGAGTGG TTGCATTGAA GTAGAGATCT TTCTGTCTCG GTAGTGAATC GACGGAAATT
GTTTATTTAT GTGTGTATCA TATGCATGTT CAGTAGGATG GTAAGAAAAT ATACACGACG GATTATATAA GATGCCTGGG
AGTATTGATA AAGCGAGTTG TGTGGATTTC GAGCTTTCTT TTGTCCAAAT ATTTTGATGA TTTTGGCTAA AATCGTATCT
CAAAGTGTGG CAATTTTAGC TGCGTGGATT TATTATGTGT TTACTTTGAA CAACAGATTC AGCACGTTTT GAGCATCTGG
AAACTTGAAG ATGCCTCGAA ATGGTTCTAG TTCTGTGAGA TTGTGCTTTT GTTAACTCTC ATGGCTTTTC AAATCCGTGT
TTTTGCTATG AAATGTGCTT TTCTAACAGT TGAAAGAGTT AGTGGAATGA AAAGTATTGT TAAGAATGTT AAAAATTTTA
TAACTGAAGG AAATCATTCT GATCTCTGGT TACTTTTGGT TGATAAGGCT GTTAGGTTCT TCAGAGAGAA GGGAGCCTCA
CATAGAAATC ATTTTATGGT GCACCGATGA GAAGAACTGA TGTTATTGGC AGTAGAAGGA GGAGGATTCT TCTCTGCTTC
GGCTTCAGGG TATACTAAGG GCCTGAGCCT TCTCCTCTTG GGTCAGAGGG ATGAGGATAA ACCCATGAGA GTAGCTCCGT
GGAACCAGTA CCAGTTGGTA GACCAAGAAA CTGACCGCGA GCTCCAGCTG GCTTCTACAA AGAATCGCCT CACCCGCGGC
TGTGCCTCCT TTGTTTGCTT TGGTCGCACT TCCGCAGGTC TTGATACTCC GTCTCCTCTT AAAGTGGGCC CTGCCCAGCA
GCATGAAGTC TCTCCAGGAC CTTTGGTTTC CAACAAGGGA AATGATCCTT CCGCACCACT CGATGATGGA AATGATAATA
GAAAGCTTAC ACTTAAAAGT AGCATAAAGA AGCCGCAAAT TGTTAAACCC GTTCATGTTG AGGCTGCTAG TGAGCAGGAA
GCAGCAGGTG GACAGGGGAT TTGTGCTCCT GGTGGTCAAG CAGAAAGAAG GAAAGTGCAG TGGACTGATA ACTGTGGTAG
CGAGCTTGTT GAAATTCGAG AATTTGAGCC CAGGTATTTA AATATTTTAT TTTCTACACC AACTTCTCTT TTGCTTGAAT
GCTAAATTTT AACTCTCTTT TTTATCAGAT GTTATCATTG GGAATTCCTG ATACGTAATA TTTTATGATT GACATTAGTG
AATTAGATAT ACTTTTTAAT GGCCTCTTCA TTTCCCCCAT CTTTATTATA AATGACACAA ACATCTGATG TTGTGATAAA
TAATATGTGA AGCATTTAGC ATTTCTGGCT TGTGCTTAAG TTGAATGAAA TAATTTTCAT TTTTTCAAAT TGAAGTGTGA
ACTGAATCTG ATTAGTGAAG GAGCATCTAT GGTTTCTCCA AGGAGGTTTA TACTCTTTTA ATCTAAATGC TATTAGGTCC
AACTGGCAGC TTGAAGACTA AGCTGGTAAC TGGGCTTGAT TATTGAATGA AAATGTGGGA TTCCCCTTTG ACACACTATG
TGTTGAAAAA TTCACATTCA CGCCTTCTAT GTTCTACTTT ACCAAACACA CCCTAAACAA TCAAGGATAA GAGATTTGGA
AAATTGTTAA GTCAATCATA TGTTTAGTTT TTAAAATATG ACCTGTAGAA GAATAGTAAA ATCAATTTTC TTACTCTAAG
TGATTTGGGA AAAGTCAGAT TACATGGTTA AGGTCTAGGA TACGTGTTCT AACCTCCAGT TATATGGAAT CCTAGAAATG
TCTAGTGCTT AGGATATGAC CTTTCTTGAC TCTTTATCTA AGGTTTCAAC TTTCAGCATG AATTTGAAGT CTATTATTTT
CTCTCTCTGG TCAAGTGTCT GGTAATTTAC AGAATAGTAG TCATTTATGG AAATTTAGGG CCCCTTTATG TGTTTATTCA
TTTCTTGTTT TTATTTTTTG TTTTCACTCA ACCCATGACC AACCAATTAC TTCATCCCTT TTTTGGATGC TGTAATCTAG
GATAAGTAAA AATATTTGCT GTTACTTAGT AATCCTCTAT AACGCATTGT GTTGTGAGCT TTACTTAGTC TAAACTAAAG
CCATTTGTTT TTGCATTATT TAGCTCTTTT GTATTGTAAT TATAAGTATT AAAAGGATGC TTTTCTCGTA ACCTAAAAAT
AATAGCTTTT GAAAAGATGT TCTAAGAGAA GAGATCTTTT ACAGGCCCTT TTTGTAAAGC TTAAGCAAAT GGGCCCTTGA
ATTCTTTTAT TTTAAGCTAT TTTTTGAGGT GTTTGATGGA AAAATTAGTG GCGATGCTGT TGCAACAATC AACATGACTG
TTTTGAAGTT TTTTGGAATC TTTAATTTTA GAAGAATGAT AGATATTCGG GTAATTTTTC TTTTCTCGCA CTTTGGTTCT
ATATGAAGTG GATTTGTAAC TTGGAAGGGT TAAGTTGATT TGATTACCCC CCTTTGGTTT TTCTTTTTGT CCTTTTATTA
AAGGATGCCT TACGCTCAAT CATTGTACTT AATTCCATTA TGATCAAGTC CACAGGAAGA AGTATATACA AGGGTTTGTT
GGATATGTAA TCACTTAGTC TCTGCTATTT TCATTTCTTG CACCTTATTG ATCACTAAAA ACATCTGGCA CTTTTCTCCT
TATTTTGAAG TTGAAACTTT CTTGAGTATA TGCACATAAT GCATACAAGG TTATTCATCA TATATGTTTA TTTAGTTATT
TATTTAACTT ATTAAGCTGT ATTACTTTTG CGAACTTAAG TGGGTTTATT TGTGTTGTCT GAAAATTTCC ACCAACTACT
CTAAAATAAT GCTTTTTTGC CCAATAAAAA AATGGAAGAA AACTTTAACT AGTAATAAAG ATATATTTTA CTTTAACTTC
AGTGGGTTTA TTTGTGTTGT ATGAAAATTT CCACCAACTA CTCTAAAATA ATGCTTTTTT GCCCAATAAA AAAATGGAAG
AAAACTTTAA CTAGTAATAA AGAGATATTT TACTCTCTTG TTGAGCCATG GACATCTTTT GTAACATTGG TTGGGCATAA
AGATTAGTTC GCATGTTGGT TGTGGAGATC AACTTGCAAA TAGCATGAAA ATGGAGCATT TGCTAGCATT TTGACACGGT
GGGTGGGCAT CGATGCTCAA GGAATGAGTA TAGAGTCCCA GATTGACCTT GGTAGCATAT GCTTTGTTTC GATTTTTATA
AATCTTTTCA ACGTTAATAC ACTGTCTTTT GATCTTTATA TAAATCTTTT GATGTCAGAT TCAGTTTGTT TTTTTGCTTG
ATCGCATAAA GTTTATGGCA GGTTTTACTT GGGGTGGGGT ACTTGATTCC TCTAAAATGA GGGGTGTACT TTAAAGGACA
AACTACAATT ACGGCAGTTG ATTAAAAAAT TAATGAGTTG AAATTTCATA GTCTGTTTTA TACATGCTAT ATTTTTTTAA
AATCTTGACG ATTTTCAAAA ACCAATGGTT CTAACTATTT TTTACCTCTA AAGTACATTG CCTCAGTTTA GAGGAATCAA
ATCCTTGGGA ATGTTGTGGT GTTTGATGGT GTCTTTTTTT GACAACAAAA GCTGCAAATT TGTATCTGAC CATTTTTTTC
AAGTTGTGTG AAAATCAAGT TTCTTTCGAT AAGCACACTG GGCGTTTTTT CAATGCTGCA TGGTTGTTGA TTATGAGAAA
TGTATTTAAA ATTCTGCTGT TGACGTTTTA AATAAACATG CTAGGTGGCT TTTCTCCTTT GAATTTTCAA CCCGTTCTAG
AGCTTTGTTT TAATAGTTCT TTTGGCACTT TAGATGATCA TAGCAGTTTT ACAATAAATT ATTCCAAACA CGCCACCAAC
CTGTGAAACA ATAAAACCAT TTTAGAATAA ATTGTAGATA TTCTCATACA GCGTCTGCTT TTCGAGGCTA AATCATGGTC
TACTCAGGTA AAGACATGCA GTTGATTATA TTGCCCTCCA TGCGTGGATT TGTATGTGTT TGTGTTCTCG AGATCAATTG
CTCTTGGTCA GTATTGATCA ATTTGATTTA CTCTAACTAA AGTTCACTTT GGTTACGTGA TTGTTTTTCA GGGGTAAATA
ATCTTTAGTA ATCATAGCTT CACATAATTC TTTTTTGCAT ACACCTTTTT CCACATGCGA GACCTTTTTA AGGTTTTCCA
CGTGATACCA CATCTTGATA TCAAAATTTC CTTCCCTTTC CTGTGACAAC TCTTCACTGT CTCTCGTTTT TCAACCCCAC
AAAACAGTCA AAATTTAAAA TTCAATATTT GCAACTTCTA TATATAAAGC CCTGTGGCTG AATACTTGTC CTACTCTGGT
AAATATGCAT TTCTTGCTGT GCTGATTGGT GCCTTCAGCA TCTTTGTTTG TTGGGGATTG AATATTCCAT AGCCCAGAAA
ATAGTTTCCT CTGGATTTCT AATGCTATTG CCTGGTAAAT ACATCTTATA ACTTCCTTCG TTACCATTCT AGGCCCAGTA
GAATACAATT CCTTTTCTAA GGACAAAGGT TTTGCTTTTT GTTCCTGTCA TCTTTTTGGG TCATTTGTTT CAGTTCAGCA
CTCCCTAGTA GGTTGGACTT TTGAAAGTCT GTGGCCCTTC AGTGACTAAT GGTCCTATCC CGTGCATCTG TTTCTGGACC
TGGTGGTTGT TGGTATCATA TTTTTGGTAG ACTGGATATG GCAAAGAATG CATCTATGGT CTTTTGAAAT GTTTTCAGGA
GATAGGGTTG TAATCTAATT CCCAAGGGAC TTTGTAAAGG AACGTGCTTT GTTTTTTAGA GCCGAGCAGG TTGTAGTTAA
TTCTAAGTGA GGGATGAGAA CATTGAATTC TCACTAGTGG TTTTTGCATA TGCCACATCA GCAAATTTTT GCATTATTAT
TTCTTGTCAG TATCCAATAA AAAATAGAAT AATTGTAGGA ATTCTATTTA AAGAGGCAAG AATCCATACT TGTTTTAAAT
TGCGTGTCAC TTCAGGTTTA TGTAATGCAT GTTGTAGTGA TAGGAAACCT TGAGGTTATG TTTCTCATTT TGTTCAATAT
TGCTGTTTAT ATCTTTAACG AGTACATTAT AAATCAGACC ATGCTACTAT TAGTTTGTCA ATTAACTGTC TTGTGATGAC
ACTGGCACGG AGTTGGGGTG GGAAGTACCT CCTCAACCCC AACCCTGTCT ATTATCTCCC TACTCCTATT TCCTCACTCT
TCTCCTGTTC CCATCCTTGA TTCCCTGTGT TAATATTTTC CCATCCCTGA CCCTGATTCC TTGAAGGTCC TCGTGTGACC
TTGAAATTGT AAATATTAGT AATAAGTATT CAGCAAACTC AGGTCTCCTT TAACAAATTC CAAATTGTCA CAAATAACAT
TTATATATTA GTTATTAATA GACACACTTA AATAGAGAGA ATAATTCTCA TTTTAAAGAT GTGAGGATAA TATTGTGATT
ATACATACTT ATATATGGGC AGTCAAGAAT AAAAATTAGT GATCACATTG TCATTTAAAA GTCTTGTACA TTTATCTTAT
AATTAAGAAT TTTCAATAAA ATCTTAAAGA GTCATATCGC GTAATTATTT TTAGCCGAAT AAGAGTGATA TTTTTCATTC
TTCATATGTG GAAACCCTGG ATAGGTTTGC AATCCTCAAT TCTCTGGATT TTTGGCTGTA CTACCTTTAT CTATTCGTAC
ATGTTTATAA CTTTTTTCCT TGTTATGTGT ATTTTTGTTT TCATGTTTTA TTATCTACTT GTAATTCAAT ACGTTGCAAT
TTGTCATTCA ACTGCAGTGA AGTGGATGGA TCGGATGATG AATTTGATAG TGGAAACGAC AGAACTTGTT CATGTACGAT
TATGTAAATT GGAGTTTCAT TAAGTTGATA GGTTCGTCGG GGTCATTCAC TGTACACAAC CCATCACTCG GTTTTTCAGT
TTCCGTGGAG ATATGTTCAA CCAACACCTT GCCTAAGTGA TGTGTTTGTC ATTGCTCGCT GCGGCTTTAA ATTTTGTTCC
TCTGCTCAGC ATCAATTTGT ATCATTCTTG TATGTGTGAA TTCTTTGCCT TTGATTCATC ATTTTTATGC TACTTTATGT
TCTTATTTTT ATATGGATTA ACCAAGTTTT CTTTCTATGC TCTGGCGTTT TCTGGAAGAA AGATAATATA CAAATGTAAG
ATTTTGTAAA AAAGAGTGGA GCAACTTGGT AACAAACTTA CGATGAGACG GGGATTGTTA AGGTATATTA TCTGTTGAGA
GGATAAAGAA AAGTTAATAC TGTTGCAATT GCTTTGTTGT TGAAGATTGA TCGGGATTTT GATAGGGATA AAATTAGTTT
TGGTCCATCA TGCCTATAAG ATGAAGCAGT TTTCTTGCAT TCGGGCTCGG ATTTGAAATA CCATTTGTGT CCTATTTTTC
TTTACCTGCT GTGTGACTTA AAGTACTCCT GCAGCTCCAA TTTCACTATA TCTAATCAAT TAGTTTGATT TCATTTTGTT
GTCATAAT

>Vigan.08G093900.01
TTGCGCACAT TAAAGAATAG GGTCACGTCG CTATCATGCG CCGTGTGGGT CACTGTCCTA TTCTCCTTTT AAATAATTGA
AACCAGAAGA AAAATATACA TAATCGGATT TTTTTCCTTC TTATTCATCG TTCAATTCAA TCACTCGCCG AGTTTTCGTC
CGGATGCTCC GAATCGTTGC TGTCCATCCA CGCGCCGGCG ACCTTCCGTT CTGATTCTCG GTACTGTAAA CTCGTTCCTT
CTTCTTCGAT CTAGGATTTG CAGTTTGTTT CTCGGAGAAG TGTTGGAAAA CCGACACTTC GAAATCTCGC TCTGCGTTGT
TCGATTTGAG TGTGATTTCA GCGTGCTCGG GGCTCGGTGT TTCTGATTTT CTTTCTCATG CATTTTCAAG TAACTCAGAA
GCTTTCTTTT CTTTTATCTT ACCTTTTTTT GGATTTAGCA ATTTAATTTG GTTTCTTGGA TTTTTTTTAT TGTGTTCGAG
AAATTGCGCA CTAACGTATT TTCGGAGTGG TTGCATTGAA GTAGAGATCT TTCTGTCTCG GTAGTGAATC GACGGAAATT
GTTTATTTAT GTGTGTATCA TATGCATGTT CAGTAGGATG GTAAGAAAAT ATACACGACG GATTATATAA GATGCCTGGG
AGTATTGATA AAGCGAGTTG TGTGGATTTC GAGCTTTCTT TTGTCCAAAT ATTTTGATGA TTTTGGCTAA AATCGTATCT
CAAAGTGTGG CAATTTTAGC TGCGTGGATT TATTATGTGT TTACTTTGAA CAACAGATTC AGCACGTTTT GAGCATCTGG
AAACTTGAAG ATGCCTCGAA ATGGTTCTAG TTCTGTGAGA TTGTGCTTTT GTTAACTCTC ATGGCTTTTC AAATCCGTGT
TTTTGCTATG AAATGTGCTT TTCTAACAGT TGAAAGAGTT AGTGGAATGA AAAGTATTGT TAAGAATGTT AAAAATTTTA
TAACTGAAGG AAATCATTCT GATCTCTGGT TACTTTTGGT TGATAAGGCT GTTAGGTTCT TCAGAGAGAA GGGAGCCTCA
CATAGAAATC ATTTTATGGT GCACCGATGA GAAGAACTGA TGTTATTGGC AGTAGAAGGA GGAGGATTCT TCTCTGCTTC
GGCTTCAGGG TATACTAAGG GCCTGAGCCT TCTCCTCTTG GGTCAGAGGG ATGAGGATAA ACCCATGAGA GTAGCTCCGT
GGAACCAGTA CCAGTTGGTA GACCAAGAAA CTGACCGCGA GCTCCAGCTG GCTTCTACAA AGAATCGCCT CACCCGCGGC
TGTGCCTCCT TTGTTTGCTT TGGTCGCACT TCCGCAGGTC TTGATACTCC GTCTCCTCTT AAAGTGGGCC CTGCCCAGCA
GCATGAAGTC TCTCCAGGAC CTTTGGTTTC CAACAAGGGA AATGATCCTT CCGCACCACT CGATGATGGA AATGATAATA
GAAAGCTTAC ACTTAAAAGT AGCATAAAGA AGCCGCAAAT TGTTAAACCC GTTCATGTTG AGGCTGCTAG TGAGCAGGAA
GCAGCAGGTG GACAGGGGAT TTGTGCTCCT GGTGGTCAAG CAGAAAGAAG GAAAGTGCAG TGGACTGATA ACTGTGGTAG
CGAGCTTGTT GAAATTCGAG AATTTGAGCC CAGTGAAGTG GATGGATCGG ATGATGAATT TGATAGTGGA AACGACAGAA
CTTGTTCATG TACGATTATG TAAATTGGAG TTTCATTAAG TTGATAGGTT CGTCGGGGTC ATTCACTGTA CACAACCCAT
CACTCGGTTT TTCAGTTTCC GTGGAGATAT GTTCAACCAA CACCTTGCCT AAGTGATGTG TTTGTCATTG CTCGCTGCGG
CTTTAAATTT TGTTCCTCTG CTCAGCATCA ATTTGTATCA TTCTTGTATG TGTGAATTCT TTGCCTTTGA TTCATCATTT
TTATGCTACT TTATGTTCTT ATTTTTATAT GGATTAACCA AGTTTTCTTT CTATGCTCTG GCGTTTTCTG GAAGAAAGAT
AATATACAAA TGTAAGATTT TGTAAAAAAG AGTGGAGCAA CTTGGTAACA AACTTACGAT GAGACGGGGA TTGTTAAGGT
ATATTATCTG TTGAGAGGAT AAAGAAAAGT TAATACTGTT GCAATTGCTT TGTTGTTGAA GATTGATCGG GATTTTGATA
GGGATAAAAT TAGTTTTGGT CCATCATGCC TATAAGATGA AGCAGTTTTC TTGCATTCGG GCTCGGATTT GAAATACCAT
TTGTGTCCTA TTTTTCTTTA CCTGCTGTGT GACTTAAAGT ACTCCTGCAG CTCCAATTTC ACTATATCTA ATCAATTAGT
TTGATTTCAT TTTGTTGTCA TAAT

>Vigan.08G093900.01
ATGTTATTGG CAGTAGAAGG AGGAGGATTC TTCTCTGCTT CGGCTTCAGG GTATACTAAG GGCCTGAGCC TTCTCCTCTT
GGGTCAGAGG GATGAGGATA AACCCATGAG AGTAGCTCCG TGGAACCAGT ACCAGTTGGT AGACCAAGAA ACTGACCGCG
AGCTCCAGCT GGCTTCTACA AAGAATCGCC TCACCCGCGG CTGTGCCTCC TTTGTTTGCT TTGGTCGCAC TTCCGCAGGT
CTTGATACTC CGTCTCCTCT TAAAGTGGGC CCTGCCCAGC AGCATGAAGT CTCTCCAGGA CCTTTGGTTT CCAACAAGGG
AAATGATCCT TCCGCACCAC TCGATGATGG AAATGATAAT AGAAAGCTTA CACTTAAAAG TAGCATAAAG AAGCCGCAAA
TTGTTAAACC CGTTCATGTT GAGGCTGCTA GTGAGCAGGA AGCAGCAGGT GGACAGGGGA TTTGTGCTCC TGGTGGTCAA
GCAGAAAGAA GGAAAGTGCA GTGGACTGAT AACTGTGGTA GCGAGCTTGT TGAAATTCGA GAATTTGAGC CCAGTGAAGT
GGATGGATCG GATGATGAAT TTGATAGTGG AAACGACAGA ACTTGTTCAT GTACGATTAT GTAA

>Vigan.08G093900.01
MLLAVEGGGF FSASASGYTK GLSLLLLGQR DEDKPMRVAP WNQYQLVDQE TDRELQLAST KNRLTRGCAS FVCFGRTSAG
LDTPSPLKVG PAQQHEVSPG PLVSNKGNDP SAPLDDGNDN RKLTLKSSIK KPQIVKPVHV EAASEQEAAG GQGICAPGGQ
AERRKVQWTD NCGSELVEIR EFEPSEVDGS DDEFDSGNDR TCSCTIM*