GBrowse Details

Vigan.08G029800.01

Basic Information:
Name: Vigan.08G029800.01
Multiple alignment
Variant Information
Position: Chr08:2398376..2403137 (- strand)
Length: 4762
Functional Information:
Description: Similar to Uncharacterized protein. [I1NFJ5, Glycine max]
InterPro: Domain of unknown function DUF292, eukaryotic (IPR005061)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:27.64,19.53,24.46,27.99,24.20,18.26,13.71,17.97
Arabidopsis thaliana homolog: AT1G25420.1
Automatic updates:
Name: NM_001367235 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max IST1 homolog (LOC100820205), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr08:2398376..2398913 (- strand)
Length: 538
Type: three_prime_UTR
Position: Chr08:2398914..2399288 (- strand)
Length: 375
Type: CDS
Position: Chr08:2400245..2400385 (- strand)
Length: 141
Type: CDS
Position: Chr08:2400490..2400661 (- strand)
Length: 172
Type: CDS
Position: Chr08:2402192..2402295 (- strand)
Length: 104
Type: CDS
Position: Chr08:2402394..2402526 (- strand)
Length: 133
Type: CDS
Position: Chr08:2403014..2403063 (- strand)
Length: 50
Type: CDS
Position: Chr08:2403064..2403137 (- strand)
Length: 74
Type: five_prime_UTR

>Vigan.08G029800.01 class=Sequence position=Chr08:2398376..2403137 (- strand)
TGAAGGGCAG AGACATTTGT TGTTTCCATT GGTCTCACCC TACCACGGGC AGTGGTATCT AAGAAACAGG CACCATGTCA
CTTCTTAACC AGCTTTTTAA CAGAGGCGTT TTGGGAACTC GATGGTGATT TCCGATTGTT TATATGATTT CACTTTTCTG
ATTCTCATAA AGCTACATGA TTTAGGTTTT GGGATTTTCT ATGTGACTGG ATTTTACTTT CCTCAAACTA GTTTTGCAAT
TTTTTCTTCT TTTTTCATAA GCTTGCTCAA ATTGTAATTG AAATGATATT TTTGTGTCAA ATTCAATTTC AGTTTTGACT
CCTTAGGGTT TATTTACTTT CTTGAAACAT GTATTGTAAG ATATTGAGGT ATATCCAATG TGTATAGCCA GATATTGGGT
TGTTGGGGAA AGGGACCTAT TCAGATAAGG GCACGGATCC TTGGTTGATG TATCGTGTCT ATGTCTGTCC TTGGTGTGAT
TGTGATTGTT CAAAAGGTTG CTTTGCACTT TGGATTTTAA TGAATGTTCT ATAGGTTGTT CACTGAACTA TCTATCTATT
ACGAAGTACA CCAGTGACCA TTTGGCTTTT CGTTGTTTTT TCATCTTGTA GCAAAACATG CCTGAACCTC GCAATTTCAC
GCATTAAGCT GCTACAGAAC AAAAGAGATG TGCAACTGAA ACAAATGTGC AAGGAGATAA GCCAATTCTT GCAGGCTGGC
CAAGAGGCAA TTGCTAGAAT CCGGGTAATC CTTGAAGGGT TGGTTAATAG TTGTTAGTTT CTGTCTGAAT CTTTTCTCCC
TGTGTTGTGA CATGCCTTTG TAAAATGTGC TGATTTAAAT AGGTGGAGCA TATTATACGA GAACAAAATA TATGGGCTGC
ATATGAAATC TTGGAGTTGT TCTGTGAATT TGTTCTTGCG CGTGTACCTA TAATTGAGAA CCAGAGGTAA GTCCTCGGGT
CATTAGAGTA CTTATTGGCA CATCGCATAC TGTCATGCTG TGTATTTTCT CCATGGTTAA CGGACCTGAA CTTTAGTACT
CGTGCAAATC AGATTGTGAT TTCCATGCTA TTTTTCACAA ATGTGAAATT GATCAATCTT TCTGAATCTT TCTGCTTCAC
TAAACTTTAC CAGTGATATG CTTTTCTCGA TACATTAGAA ATCAGAAACA GGGAAAGTCT GTGTACACTA TTGGTAGTTT
TTTGGTGAAT GTAACAGTGA AAAATATATT AGATGGCCTC TATTGTCAGT TGAAACCCAA GTATTTGTGA TTTCATCGTT
TTTGAATCTT CAAGGGGGGT AATATATATA TTTTTGAACA TAGTATTAGA ATCTTATGAT TTGCAATTTG AATCACAATT
GGTATGACTT TGATATGATT TGGCTACTGG CGTAAAGAGA TGAAGCTGGG GATGACTAAG AATATTATAA ATTACGATAC
ATGGATGAAT CAATGCAATT CCATATCACC AATACAAAAG AAAAGAAACT AAAGGAGTAC TACTAAACAC ATCCTTTTTT
ATTAATCTGA TGTTTTAGTT TCATTCTTCT AAAACAGGGG TTCCGCATTG TCACTCACTC ATTATCTATG GTATTTGGCT
GTTCCCTTAC TGTTTAAAGT CTTGTTAAAT ATAGGTTTCA AACACTCTGC TATATCTCGT GATTCTGTTG TGTGGGACTT
TAGGTCCCTT TCTAGTTTAA AATTATTGGA TTTAGCACTG CCCATTATTT AAGTGATGTA TTTCAAGTTA TTTTTTGTTA
TGTCACCAAA CTTTACAATT TCATACAATT TATGAATCGA TCAAATAAAT AACAACAAAA ACAGATTTCT CTAGGTGAGA
TTGGCTACTT AGATTACAAA ATGCCATTCT GTTTGTTTTA AATAAATCTT TTATAATATT GTTTACCATG AGATCCATGC
TGACCATTTT CTCCAATGTC CTTCTTGGTC TCTTGCTTTT CATGGGGCTA AAAACTGTAT AATGTACTCT CCGCACTGGT
GCTTTCAGTG ACTTTTGTGA ATATACTCTC TTCACTTGCA CAATTTATGA ATCATGATTA AAAAATTAGC ATAACAATTT
GCAATATAAA TTGTGATTCA ATGACCTTGT TTCTGAACTT AAATAGGGTA CAATGTATGG TTTTAAACTT GGTTTAGCAA
AATTGTTTTT TACATAACAT TAGGGAGGAA TAGTGTACTT TACCTATACT TGATAACTTT TTTTATATTT GTATGTGTTG
TGTTAGTATA TTGACCCTGT GCATACTGAA ATATGTGGCA CTTTAATATT TCTGAACCTT GAAATGAGAC ATGTTACTTA
TTAGCAACTA AATAAATAAA TCATGTACGA AATCACTTTC AGAACAGAGA CTATTCATTT TCATAACTGA ATTGAGTTTA
CTAACAGTTG CGCCTTATAC AATTTAAAGC AAAATATTTT TAGTCAAACT TGAAGCCTTC CTTCTCCACA TGATAGGGAA
TGCCCCTCGG AATTGCGAGA AGCCATTGCA AGTATAATTT TTGCTGCTCC TAGATGTTCT GATGTACCAG ACTTATTGCA
CATCAAGAAC TTGTTTACCA CTAAATATGG GAAAGAATTT GTCTCTGCAG CATCAGAACT TCGTCCTGAT TCAGGCGTAA
ACCGCACGGT GATATATCTC TAATTGCAGC TTCTGAGTAG CAAACTGTTA CAGCTTCTAA ACAATTGCAT AATATCATTA
GTCCAGCTGT TCATCTGATA TGGTTTTTTC AGATCATTGA AAAGCTTTCA GTTACTGCTC CATCTGGAGA GGTAAAACTC
AAGGTCTTGA GGGAGATTGC TGAAGAATAC AATATAGCAT GGGATTCTTC TAAAACTGAG GCTGAATTTC GGAAAAATCA
TGAAGATCTT CTGGTAATTT TATCAGTAGA TGCTTGTTTC TTCCTTCATT CTTTTACATT AAAAATATTA TCTACTACTA
GATTCATGAC ATGTCATTGA CAATAGATAG CATCTATATA ACTAATGAGC TCTCACTTGT GTAACTATAA TGGTTTACTA
CCATATTTAT CGCTGACACT GACCCCAGAA ATTACTGAGA ATTTAATCCT AATCTCAGGG TACTTTGGTC TTCGTGTGAT
TGTTCTACTA TGAGCATGGG AAAGTGACTC TAGCTATTGA GAGTATTTGT CTTAAATCTC CTCACATCTT CTGTATATGT
CAGATAGTTT AGGTTGTTTG TCGATTGTCT AACACAACCA TCACCTTTTA TATGGGCTGG GGACTATGTA AAGAACAGCA
ACAAGGACCA AGTGGGCAGG TTTATAAGTG AGATATTCCG TGAATGCAGG AGATCTCGAG GTTATCTGTT TTTCATCAAT
TTTTCAAATA TTAATGTGTC TATTTTATTC CAGTTTCCTG GACTTTTCAA GTGTAGCTTG TTTAATGGTG AGTTTGGTGA
TTTCCTTCTC ATAGACATGA TACAGGACTA AAATTGTTTT CAGGGAGGGT CCATTTATTA TCAGTGGTAG TCATAATTTC
AGTTATTTAG TGAAATGATT CTCACCGCTT AACTCTGTCA TCAATCAATG TGGGTCTACA GCGCCTTAGA GTTCCTTTGA
GTTGTATACA ACTCAAATGT ACACGTTTAT CTTAGAACTT GACATTTAGA AGCCTGTTTC CAGACAAGGG AAATCCAAAT
CTTGAATTCA CTGACCTACG TATTATTTAT AGATTTAAAC TAAGTGTTGT GAACTAATAT TCCAAGATTT TTGAAGTCAT
TATACTTTGT TGCCTACTTC TTTACTGTGG TCTCCGGAAT TTATTCATCT TTTCTTGATT TTTATCATGA TTTTCTCGTG
TTACCTTAGG GAGGAGCAAA GCAAGTTAGT GCTGGAGTTA CGCTTTCTCA TACGCCCAGC AGAAATGGTT CTAATAATCC
ACCATCTCGT ACTAAGGAAC CTTCTAACAA GTCTGTGCAT GATAAACAAG AATATAAACA ACTTGAAGCT CCCAGCCTTT
CTAACAATAA TTCTGCATTG AATATTAATG AAATTGAACA GTCCCACAAA AATAATGATG TTCCCGCTGG AGATGCCCAA
AGTGAGACAA GATTTCAATC TTCTGATGTA CTGGAGAAGG CGCGTGCTGC CATTGCTTCT GCAGATCGTG CATCAGCAGC
TGCTCGTGCT GCTGCTGCAC TAGTCCAGAG TAGTTTTGCA TCATTGAAGC TGGAAGGTAA ATAAATCTTC AGTGATCGTA
ATAACGGAAA AGAAACGTTA GGAACTAAAT GCGAAAGGAG AAAGTGATGT TCTTTATTGC GGAGGTGACA GCTTCATACG
CTTGTTTCAA GTAATAAGAA TTGTGCGGTA TGCATTGTAT ATTCTTAATT TCGTATATGT GTATCATTGT AACTTAACGA
AATACTGAAG GGTGCGAACT TTTCTAAATC TGCCCTTATT CTTGCTACAG CGAATAATTG TGTTCATTTT CAAAATTGTT
ATACATACTT ATCATCTCAG ACATGTTTTA TTGCAGGGAT GGGATAAACT TTTTGTAGTT GTGATACTTG TTAGGTGTTG
TGGCCTTTTC AACCCAACCC AACATGTGCA AGTGTGATGA GACCTTCACG TGCGATTATA TTTGACAGGA TTGATTTTTT
TATAACCGCT GGTTATCTGG TTATCATAAG TTATTATTTG AAGATGTGTG GGCTAAAATG AGTAGTCCGG GTTATATTCC
AGTCTTTGTG TAATTTTTAA TTCCAGCTGG TCTTATGGTG GG

>Vigan.08G029800.01
TGAAGGGCAG AGACATTTGT TGTTTCCATT GGTCTCACCC TACCACGGGC AGTGGTATCT AAGAAACAGG CACCATGTCA
CTTCTTAACC AGCTTTTTAA CAGAGGCGTT TTGGGAACTC GATGCAAAAC ATGCCTGAAC CTCGCAATTT CACGCATTAA
GCTGCTACAG AACAAAAGAG ATGTGCAACT GAAACAAATG TGCAAGGAGA TAAGCCAATT CTTGCAGGCT GGCCAAGAGG
CAATTGCTAG AATCCGGGTG GAGCATATTA TACGAGAACA AAATATATGG GCTGCATATG AAATCTTGGA GTTGTTCTGT
GAATTTGTTC TTGCGCGTGT ACCTATAATT GAGAACCAGA GGGAATGCCC CTCGGAATTG CGAGAAGCCA TTGCAAGTAT
AATTTTTGCT GCTCCTAGAT GTTCTGATGT ACCAGACTTA TTGCACATCA AGAACTTGTT TACCACTAAA TATGGGAAAG
AATTTGTCTC TGCAGCATCA GAACTTCGTC CTGATTCAGG CGTAAACCGC ACGATCATTG AAAAGCTTTC AGTTACTGCT
CCATCTGGAG AGGTAAAACT CAAGGTCTTG AGGGAGATTG CTGAAGAATA CAATATAGCA TGGGATTCTT CTAAAACTGA
GGCTGAATTT CGGAAAAATC ATGAAGATCT TCTGGGAGGA GCAAAGCAAG TTAGTGCTGG AGTTACGCTT TCTCATACGC
CCAGCAGAAA TGGTTCTAAT AATCCACCAT CTCGTACTAA GGAACCTTCT AACAAGTCTG TGCATGATAA ACAAGAATAT
AAACAACTTG AAGCTCCCAG CCTTTCTAAC AATAATTCTG CATTGAATAT TAATGAAATT GAACAGTCCC ACAAAAATAA
TGATGTTCCC GCTGGAGATG CCCAAAGTGA GACAAGATTT CAATCTTCTG ATGTACTGGA GAAGGCGCGT GCTGCCATTG
CTTCTGCAGA TCGTGCATCA GCAGCTGCTC GTGCTGCTGC TGCACTAGTC CAGAGTAGTT TTGCATCATT GAAGCTGGAA
GGTAAATAAA TCTTCAGTGA TCGTAATAAC GGAAAAGAAA CGTTAGGAAC TAAATGCGAA AGGAGAAAGT GATGTTCTTT
ATTGCGGAGG TGACAGCTTC ATACGCTTGT TTCAAGTAAT AAGAATTGTG CGGTATGCAT TGTATATTCT TAATTTCGTA
TATGTGTATC ATTGTAACTT AACGAAATAC TGAAGGGTGC GAACTTTTCT AAATCTGCCC TTATTCTTGC TACAGCGAAT
AATTGTGTTC ATTTTCAAAA TTGTTATACA TACTTATCAT CTCAGACATG TTTTATTGCA GGGATGGGAT AAACTTTTTG
TAGTTGTGAT ACTTGTTAGG TGTTGTGGCC TTTTCAACCC AACCCAACAT GTGCAAGTGT GATGAGACCT TCACGTGCGA
TTATATTTGA CAGGATTGAT TTTTTTATAA CCGCTGGTTA TCTGGTTATC ATAAGTTATT ATTTGAAGAT GTGTGGGCTA
AAATGAGTAG TCCGGGTTAT ATTCCAGTCT TTGTGTAATT TTTAATTCCA GCTGGTCTTA TGGTGGG

>Vigan.08G029800.01
ATGTCACTTC TTAACCAGCT TTTTAACAGA GGCGTTTTGG GAACTCGATG CAAAACATGC CTGAACCTCG CAATTTCACG
CATTAAGCTG CTACAGAACA AAAGAGATGT GCAACTGAAA CAAATGTGCA AGGAGATAAG CCAATTCTTG CAGGCTGGCC
AAGAGGCAAT TGCTAGAATC CGGGTGGAGC ATATTATACG AGAACAAAAT ATATGGGCTG CATATGAAAT CTTGGAGTTG
TTCTGTGAAT TTGTTCTTGC GCGTGTACCT ATAATTGAGA ACCAGAGGGA ATGCCCCTCG GAATTGCGAG AAGCCATTGC
AAGTATAATT TTTGCTGCTC CTAGATGTTC TGATGTACCA GACTTATTGC ACATCAAGAA CTTGTTTACC ACTAAATATG
GGAAAGAATT TGTCTCTGCA GCATCAGAAC TTCGTCCTGA TTCAGGCGTA AACCGCACGA TCATTGAAAA GCTTTCAGTT
ACTGCTCCAT CTGGAGAGGT AAAACTCAAG GTCTTGAGGG AGATTGCTGA AGAATACAAT ATAGCATGGG ATTCTTCTAA
AACTGAGGCT GAATTTCGGA AAAATCATGA AGATCTTCTG GGAGGAGCAA AGCAAGTTAG TGCTGGAGTT ACGCTTTCTC
ATACGCCCAG CAGAAATGGT TCTAATAATC CACCATCTCG TACTAAGGAA CCTTCTAACA AGTCTGTGCA TGATAAACAA
GAATATAAAC AACTTGAAGC TCCCAGCCTT TCTAACAATA ATTCTGCATT GAATATTAAT GAAATTGAAC AGTCCCACAA
AAATAATGAT GTTCCCGCTG GAGATGCCCA AAGTGAGACA AGATTTCAAT CTTCTGATGT ACTGGAGAAG GCGCGTGCTG
CCATTGCTTC TGCAGATCGT GCATCAGCAG CTGCTCGTGC TGCTGCTGCA CTAGTCCAGA GTAGTTTTGC ATCATTGAAG
CTGGAAGGTA AATAA

>Vigan.08G029800.01
MSLLNQLFNR GVLGTRCKTC LNLAISRIKL LQNKRDVQLK QMCKEISQFL QAGQEAIARI RVEHIIREQN IWAAYEILEL
FCEFVLARVP IIENQRECPS ELREAIASII FAAPRCSDVP DLLHIKNLFT TKYGKEFVSA ASELRPDSGV NRTIIEKLSV
TAPSGEVKLK VLREIAEEYN IAWDSSKTEA EFRKNHEDLL GGAKQVSAGV TLSHTPSRNG SNNPPSRTKE PSNKSVHDKQ
EYKQLEAPSL SNNNSALNIN EIEQSHKNND VPAGDAQSET RFQSSDVLEK ARAAIASADR ASAAARAAAA LVQSSFASLK
LEGK*