GBrowse Details

Vigan.07G233700.01

Basic Information:
Name: Vigan.07G233700.01
Multiple alignment
Variant Information
Position: Chr07:31655538..31657334 (+ strand)
Length: 1797
Functional Information:
Description: Similar to Uncharacterized protein. [I1LLD6, Glycine max]
GO: Biological Process: phosphorelay signal transduction system (GO:0000160)
Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: phosphorelay response regulator activity (GO:0000156)
InterPro: Signal transduction response regulator, receiver domain (IPR001789)
CheY-like superfamily (IPR011006)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.07,11.91,0.87,26.76,3.52,5.42,9.97
Automatic updates:
Name: NM_001255250 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max two-component response regulator ARR9-like (LOC100818762), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:31655538..31656037 (+ strand)
Length: 500
Type: five_prime_UTR
Position: Chr07:31656038..31656140 (+ strand)
Length: 103
Type: CDS
Position: Chr07:31656265..31656368 (+ strand)
Length: 104
Type: CDS
Position: Chr07:31656461..31656538 (+ strand)
Length: 78
Type: CDS
Position: Chr07:31656673..31656743 (+ strand)
Length: 71
Type: CDS
Position: Chr07:31656872..31657079 (+ strand)
Length: 208
Type: CDS
Position: Chr07:31657080..31657334 (+ strand)
Length: 255
Type: three_prime_UTR

>Vigan.07G233700.01 class=Sequence position=Chr07:31655538..31657334 (+ strand)
ATAGAATAGA GTTCACACGA CTCTGAACAG TGAGAAGAAT GACGACAACA ACGTTTGATA ATTAAGAATA ATAGTTTGGT
CTGATGAAAG GGTAATGGAT TAAGGAGAAG AGAAGAGAAT AGTTTTTTGT CTTTAACCCT AAGCAAAAGG GTGAAATAGA
ATAATGAAAA GAATAGTAAT AATGAACAAG TCAGATTTTG ATGTGTTTGG TACAATAACA GCACTTTCTT TGCTTGTTTT
TCAATTCAAA AATCAACCCA AAAGATCCGC CAGATTCTTG ATGAAATCTG TCGGATCTTG CTTTCCAAAC TGTCAGATTT
CCTTCGTGGA TTTTCTATCT TCTTGACCAT GATGTGCCCC CTTTTAAAAT CTCTGCATGC CACCCTCTTT CATCACATTT
CAGCACTCTT TTCATCTTTT TCCCTTCTTC TTTTCTTCTT ATTCTTCTTA TTCTTCTCCT GTTTTCGCCT GCAACTGCAC
ACATCGTTAT CATAATAATC ATGGGTATGG CTGCAGAGGC ACAGTTTCAT GTTTTGGCTG TTGATGATAG CCTTATCGAC
AGAATGTTGA TTGAGAGACT CCTCAAAACC TCTTCTTTTC ATGGTAATTT TGATGTGTGC TGTCCTTTTT TTGAAAATAA
GGTTTTTTAT GTTTGTTTAT CAGATGGGGT GATTTGGTTT TGCTTGATGT GAAATCCGAT TCATTTTGGT ATGTTTTGTG
ATTACAGTTA CTGCTGTGGA TTCTGGTAGT AAGGCTTTGA GGTTTCTTGG TTTGGTTGAA GATGAGAAGA GAACTGAAGA
GCCTCCCACC ATTGCTTTAC AAGCCAATCA GGTTCAGTTT TACTGCAAAA TTTATAAAAG ATGACACATA GTTAGAATGA
TTTATGAGAT CTAATTAATC CCTTTTGCTT ATTGTAATTG CAGGATGTAG AAGTAAACCT GATCATAACT GATTACTGTA
TGCCAGAAAT GACAGGATAT GATCTGCTGA GAAAAATCAA GGTAAAACTA CTTGGTTTTT TTATGGGACC TGGTTTCAGA
AATAACATGT TTTATGTGCC TTTAATGATG GAAAATCTGA AACCAATCTT GTGATTTGTA TGTTGTATGA ATAACAAAAA
GTTATTGATT TGCAGGAATC TAAATCTCTT AAAGACATAC CAGTGGTGAT TATGTCCTCA GAGAATGTTC CATCAAGGAT
CAACAGGTGA GGGAAAATAC CTCTTATGAA CAAAATCTTA ACATCAAGAT ATTTGTTTGA AAAAAAGAAG TAAACAAATT
TTAAAGGCAT CAAATTGCAA GATATTTAAC AGAATGTTCT TTTGCTTATG GCAGATGCCT AGAAGATGGA GCTGATGAAT
TCTTTTTGAA ACCAGTTCAA CAGTCAGATG TGAACAGGCT GAGACCTCAT CTGATGAAAT CAAAAGTTAA GGATGAAGAA
GAGGAACAGA TCAATAACAA AAGGAAGGAA ACAGAAGAAG AAGAAGAGCA TTCCCCAGAT AAAACCAGGA CAAAAATGGA
GCCTCAAAAA GTGGTTAATT GAAGTTAAAA ACTTGATGAA ACATCATAGA TTGTACCTAA AACATTTACC TCTCCTCTGC
CTCACCAGCT AACAAGTGAG AAGAGTAGAT CGCACCTCAA TCATACTAAA GAAATCTCTA GTATAGCACC TGACAAAACA
GATTTCATTT TTCATTCAAT TTTCTGACAC ATAATTTATA CTTTTTCTCT TATATCTCCA ATTCACCACA AGATTTCTTT
TTTCTTGCCT GTTAGCAACC CCTTTCGGAA GGTAAAA

>Vigan.07G233700.01
ATAGAATAGA GTTCACACGA CTCTGAACAG TGAGAAGAAT GACGACAACA ACGTTTGATA ATTAAGAATA ATAGTTTGGT
CTGATGAAAG GGTAATGGAT TAAGGAGAAG AGAAGAGAAT AGTTTTTTGT CTTTAACCCT AAGCAAAAGG GTGAAATAGA
ATAATGAAAA GAATAGTAAT AATGAACAAG TCAGATTTTG ATGTGTTTGG TACAATAACA GCACTTTCTT TGCTTGTTTT
TCAATTCAAA AATCAACCCA AAAGATCCGC CAGATTCTTG ATGAAATCTG TCGGATCTTG CTTTCCAAAC TGTCAGATTT
CCTTCGTGGA TTTTCTATCT TCTTGACCAT GATGTGCCCC CTTTTAAAAT CTCTGCATGC CACCCTCTTT CATCACATTT
CAGCACTCTT TTCATCTTTT TCCCTTCTTC TTTTCTTCTT ATTCTTCTTA TTCTTCTCCT GTTTTCGCCT GCAACTGCAC
ACATCGTTAT CATAATAATC ATGGGTATGG CTGCAGAGGC ACAGTTTCAT GTTTTGGCTG TTGATGATAG CCTTATCGAC
AGAATGTTGA TTGAGAGACT CCTCAAAACC TCTTCTTTTC ATGTTACTGC TGTGGATTCT GGTAGTAAGG CTTTGAGGTT
TCTTGGTTTG GTTGAAGATG AGAAGAGAAC TGAAGAGCCT CCCACCATTG CTTTACAAGC CAATCAGGAT GTAGAAGTAA
ACCTGATCAT AACTGATTAC TGTATGCCAG AAATGACAGG ATATGATCTG CTGAGAAAAA TCAAGGAATC TAAATCTCTT
AAAGACATAC CAGTGGTGAT TATGTCCTCA GAGAATGTTC CATCAAGGAT CAACAGATGC CTAGAAGATG GAGCTGATGA
ATTCTTTTTG AAACCAGTTC AACAGTCAGA TGTGAACAGG CTGAGACCTC ATCTGATGAA ATCAAAAGTT AAGGATGAAG
AAGAGGAACA GATCAATAAC AAAAGGAAGG AAACAGAAGA AGAAGAAGAG CATTCCCCAG ATAAAACCAG GACAAAAATG
GAGCCTCAAA AAGTGGTTAA TTGAAGTTAA AAACTTGATG AAACATCATA GATTGTACCT AAAACATTTA CCTCTCCTCT
GCCTCACCAG CTAACAAGTG AGAAGAGTAG ATCGCACCTC AATCATACTA AAGAAATCTC TAGTATAGCA CCTGACAAAA
CAGATTTCAT TTTTCATTCA ATTTTCTGAC ACATAATTTA TACTTTTTCT CTTATATCTC CAATTCACCA CAAGATTTCT
TTTTTCTTGC CTGTTAGCAA CCCCTTTCGG AAGGTAAAA

>Vigan.07G233700.01
ATGGGTATGG CTGCAGAGGC ACAGTTTCAT GTTTTGGCTG TTGATGATAG CCTTATCGAC AGAATGTTGA TTGAGAGACT
CCTCAAAACC TCTTCTTTTC ATGTTACTGC TGTGGATTCT GGTAGTAAGG CTTTGAGGTT TCTTGGTTTG GTTGAAGATG
AGAAGAGAAC TGAAGAGCCT CCCACCATTG CTTTACAAGC CAATCAGGAT GTAGAAGTAA ACCTGATCAT AACTGATTAC
TGTATGCCAG AAATGACAGG ATATGATCTG CTGAGAAAAA TCAAGGAATC TAAATCTCTT AAAGACATAC CAGTGGTGAT
TATGTCCTCA GAGAATGTTC CATCAAGGAT CAACAGATGC CTAGAAGATG GAGCTGATGA ATTCTTTTTG AAACCAGTTC
AACAGTCAGA TGTGAACAGG CTGAGACCTC ATCTGATGAA ATCAAAAGTT AAGGATGAAG AAGAGGAACA GATCAATAAC
AAAAGGAAGG AAACAGAAGA AGAAGAAGAG CATTCCCCAG ATAAAACCAG GACAAAAATG GAGCCTCAAA AAGTGGTTAA
TTGA

>Vigan.07G233700.01
MGMAAEAQFH VLAVDDSLID RMLIERLLKT SSFHVTAVDS GSKALRFLGL VEDEKRTEEP PTIALQANQD VEVNLIITDY
CMPEMTGYDL LRKIKESKSL KDIPVVIMSS ENVPSRINRC LEDGADEFFL KPVQQSDVNR LRPHLMKSKV KDEEEEQINN
KRKETEEEEE HSPDKTRTKM EPQKVVN*