GBrowse Details

Vigan.07G232100.01

Basic Information:
Name: Vigan.07G232100.01
Multiple alignment
Variant Information
Position: Chr07:31502867..31508594 (- strand)
Length: 5728
Functional Information:
Description: Similar to Uncharacterized protein. [I1JW39, Glycine max]
GO: Biological Process: glycerol ether metabolic process (GO:0006662)
Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Thioredoxin (IPR005746)
Thioredoxin-like fold (IPR012336)
Thioredoxin domain (IPR013766)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:58.65,11.21,7.51,18.43,5.95,17.40,6.09,4.56
Arabidopsis thaliana homolog: AT3G06730.1
Automatic updates:
Name: NM_001249440 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500580 (LOC100500580), mRNA; nuclear gene for chloroplast product.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:31502867..31503433 (- strand)
Length: 567
Type: three_prime_UTR
Position: Chr07:31503434..31503550 (- strand)
Length: 117
Type: CDS
Position: Chr07:31504319..31504399 (- strand)
Length: 81
Type: CDS
Position: Chr07:31507463..31507585 (- strand)
Length: 123
Type: CDS
Position: Chr07:31508207..31508443 (- strand)
Length: 237
Type: CDS
Position: Chr07:31508444..31508594 (- strand)
Length: 151
Type: five_prime_UTR

>Vigan.07G232100.01 class=Sequence position=Chr07:31502867..31508594 (- strand)
ATTATCACTA TTTAGTGACA GAAAAGAACC TAAGTTAAAG AGAAATTTTG TCTATCTATC TATTCATGAA AGAATAAGTA
GATATGGTAA ACCCCTGTAC TCAAAAACCC TCTTTTCATT GAAGCACTCT GCAAATTCCA AACCAACAAG AATGGTTCTC
TTCCAATGCC ATGCCCCTCA CCACAGCATG GCCATTCTCT CACCCTTCAA TTCCAAACCC CTTTGTGCTT CTCTACCAAA
CCCTTCTTTC ACAGCTCACC ACCACCCTTA TCCTCTCACC ACAACCACTC ACCTAAATAA CAATAAGCCT CTTTCACTCT
CCACAGTACC CAGAAAGTTG CTCTGCAAGC CACCCCAAGG AAAATATATC AGGGATGACT ATCTTGTGGT ATGCCACTTC
AAACACTTCA CTTTCTACCA TATCGTTTCT GGGTCTATCT TGTTTTTTCC TCGTATGGGT CTTATGTCAT TCTTTCTGAA
TTTTCGTTTT TCATACCAGT TTTATCTAGG TTTCAACAAA ATGACTTTTT GTTGTGAATT TTTTTCTTTT TATTCCTTTG
TACATCCGTT CAAGTCGCAA AAATGGTTCT TGTTTTTAGT GTAATGAATG GTTTTGTGTT TCGGAGGTAA CACTTTGTTT
TTTCTTCTGA TAAAATTCTC TACTTTTTAC CCCTTATGAG TAAGAACTTA AATTTTTTTT TTATTTGTTT CCTTATGACT
TCTTACTGTG TAAATGTAGG AATTCTTGAA AAGAAGAAAG AACACAGAAG GGTTTAAATT TTTTAATGCT TTACTCACAT
CAATAAAAAA GTAATCTTTG GCAGGACTTT GAAGGCAATT AACGGATAAA TCAATAAATT TTAAGATAAG CAGTTTGCGA
GTGAATTGAA ATGTAAAAAA ATAACGCTGT CCAAACATAG ACTATTTACT TTTTTGTGTT TATTATTCGA TAAACTAAAT
GTTATCTGAT ACTGCAGTGA TCCCGTTGTT TGTTATTTTC GATTTGTAGA AAAAGTTGTC AGCTGAGGAA ATCCAGGAGC
TGGTGAAGGG GGAAAGAAAA GTTCCTCTTA TTATAGATTT CTATGCAACT TGGTGTGGAC CTTGCATCTT AATGGCTCAA
GAACTTGAAA TGGTACGTGG TTTACATGAT CTGTAAAATT CTTAACCTCT GCTCTGATTT GACTACGAGG ATGTGTTGTT
GTTGCCATCT GATGTTTGTT TCAACTTTCA GGCTAGCACA ATGCCATAAA GTATTTTTGA TGTTTTAATT CAGCCTTTAC
TTGTATCAGC CTCCTTTGCT AGTCTTTAAT TATCTTTCAG ATTGTGCTAT TGGATAGATT GAATACCATT CACCAAAAAT
ATGGATTAAA TTCATTAAAT ATTTGACAAA GATTTTCCTA CAAGGAAACG GACAGATGCC AAACTTGGAA ATTCAACGGT
TAATAAAGTT TGCCTCAATT ATTTGCATAA AAAAATAGTT ATTGTAGTTA TTGGGGGCTG GTTGGACGTG CAATGGCTTG
TCTTATTGGT TCTTTTTTCT GTTCTACTTT TATATTTGAC TCGCATCTGG AAAACAGTCT GCAACTGTCA TATTTGGTGC
AACATCAAAG TTTTTGGGCA CAACACTGCT GCAGTTTTTG CCACATTGCT CCGCATTGTC AAGGATTGCA ACAAAACTGC
AACTACTACC ACAACTTCAA TTTTAAAACC TTGATTCTAT ACAATGATTA ATTTCATCAT TAATTGTCCA GTATGACAAT
GAATTTGGCA TGTTATTCAT TTTCCTTGCC CCTAAAATTA AGGGTTTCCA ATCTGTTGGA CAGCCTATCT GGTTTGATCA
TAACAGATTA TGGTTTTATA TATTCCAATT GCATTGTTAT CATTTGAGAG TTTTCTATTA TTCATATTCA CTGAGTGTGT
TAGGTCCAAG AATTGAAATG AGAGAAAAGA AAGGTTTTTA TTGAATAGAA TGAAAAGTAC AATGAAGAAA ACTCTCTTCC
AAGGTTTCTT CTTCTCAAAG AATCAATTCT CAATATGCAA TGATAACACG TTTAAATCTC TCCTATCCTT ATTGTTCTAT
TAATGGCTAA CTAATCCCTC TAACTAACAC ATTAATAATC TAACTATCTC AACTAACTCC TGCTACTCCT TACATCCTAA
CCGTGTCACG ATGTTTATCA GTTTTATGTG TGAATGAGGC CAAAGTTAGC TGGTTCTTGC ACTCAATATT ATGTCAGTTA
TTGCTAGTGC CGGTGGTTGA AAACAGAAAG GCAAAATATT TTTTAATTTC ACATAAAAAC TGTTTGCTAA AACTCTTTAT
TTTTCATATT GTATCATATC TGATCTTATT CCAACATGGA GTGGAAAAAA TGTCCAGGAT AAGCTGAAGC TTGTGACTTC
TCTATTTTTT AGGTTGCTAA TCTGCTATCA TATTTCATTC CATCATCATT AGTCCAGTAG CATGTACGGT TGAAACTTAT
GTACAAAATT GTTTTAATGG AAAAATTGCA AAGAAGAGAT AGTAGCAAAG GATGGCCATG ACTAACCAAA TAGACACATA
AAAAGAGGAA CGAATGGGTT TTTGAGTCTT TCACTGGTAG ATAGTTGCAA AACAGACCTC AGACACTTAG ACTCCAGATA
CAATACTGAA ACAGAGAAAA CTTAAAAAGA ACTCAAATTA GAGGCAAAAA CACAGGAAAG AGATTAAAAG AAACAGAGAT
TTGTGATGAT AAAATAACTG CAAAAACATG AGATTATAAG AGGCGACTGT AAAAAAACAG AGAATGAGAA TGAGAGGCCA
GAGAATGAGT CACCACACAC ACTGGTTGGC AGAGGGTAGC ACAGGGATGT TCAGTACTCG TAATGTGTAT CAAATTCATT
GAGGTTGTTC TGGGGACTTT GTACACCGTC AACATAGTGA TGCTATAGTG ATGCAAAAAG TTTCTATGGT GACAACTTCA
GACCCTACAG TACACAGGGC AGTGCACAGA GGCCAGGCTC CACTGCACTC CGCCATGTTG CTATAGTGCA CTATTGACAC
TGCTGCTAGT AATTGATAAT TTAATAAACA ATCCTTGCCC TCCTTTCGGT GTTATTCCAT GTGACCGGCT ATATACAACA
TTTTCATGAC TTCTAAACAT GTTCATTAAC ATTATTTTGT TGTACATGAC TGAATTAATG GTAGATACGA GAGTATTGGT
TGCTTGCTAA ACTTGCTTAG ATCTGGAGCT TGTGCCATAT TTGAATTTAT AGATCTTGAG ATTGATCTCA AAAATAACTT
GATAGATTCG GGCCAATTGA ATGCTATTTA AGGAGACTGG GCCTCTATGC TTATAAATGG AAATTAGTCT CTAACGTGTC
TGAATTAAGT TGCATTAGTC TTGTAATATT CATGAGTTTT AGTTCATCAG GAAGAGGCTT TAGTCATTTA TCATTGTGTT
TGGTTATAAA ACACCTTATT AAGCACATAA TAAATTAGTG CTTATAATTT AAGTACTTAC GTGTAAATTG TTTCTATAAT
TGAAGAGGAA ACAAGGTCAA ACTATTTTTG TAATTTATTC ACATGAGTTT ATATAAATAA GTTGAAAATA GCTTATAAGC
GATCCCAAAC GCTTCCGCCA GATCAGCTTA AACACTCTTT TTCAAATGCA TCCTTAGTTA AGAGACGGTG TGATTTTGAA
AACAGTTATC CATATATTAT TAATCAAGTT CATAGCATTG GCTGCAACTT TGCAACTAGT TTACAAGCAA AACACTTATC
CTAAAATTCT ATTGAAATTG CAAACGAATG TTAGCTCTAA TTTTATGATA TTTAATATTT TTTTACTTCA TCACTAGAAA
AGATACATTA ATGAACTTCA CTAAGGGTCA CGTTGCATTC TGACAATGAA GTTCGCTGCA ATAGTTCATC TTCCATTGAA
ATACACATAT CTTCTGACTG GTAGAACCAA TTTAAGCATA TGGGGATCTA GAATTTGTTC TTCTCCAAGT GGTTGCTTTT
TTTCCCTTAG CACTGACTTT TTACTTAATA CTTGAACAAT CTTTGCATAC TTTGTCTTAT TTCCTTAATT CTATAAGTAT
GTCATGTTTT AATCAATAGG GTGGTTCTTA ATCTCACAAT AGGGTGGTTA CCTGTCTTGT TGAGTAGTTG ATTTGAAAGC
ACAGAAATAA CCATCCATAT TTAATTTTTT TTCAGCTTGC AGTTGAGTAC GAAAACAAGG CAGTCTTTGT TAAGGTTGAT
ACTGATGACG AGTATGAATT TTCACGCGAC ATGCAGGTAA TACACCCTCA ATTTTGTTTA CAACGTGTTC ACGTACAAAT
ACTCATTAGA GATCCATTAA AAAACCTTAT TTATTTTTAT TAAAGTTGTC AAAGAGTTAT TATAATAAAG AGTAAATCGG
TTAATCCCTC ATGCTTTTAT GTTCATAACC TAGTATTACA AGTACTAGGG TCTATATACT ATTACCTCTT CATAATTTTC
CACTTTTTCT ACTCTACAAA ATGGCACGTG AACTTGTAGT AGGGTACCCT AAAAATGTGG GGACAAAAAT AAACATGCAT
TGCATCATGG GGTGTAAGCA GTTTCCTCAT AAACCAACAC ATGCTAATCC TGTTTGTTTG TTTAAAGATA ATAATAATCC
TAAATGTCTA GATCTTGTAT ATGTATTTTC TTTGTATTAT GGCTGACAAG AACACTATTT TAATGGTTGG TGTTTCAACC
TTCAAGCCTA GACTAGACAA GACACTCAAA GGGGACTATT AGCAAACAGA TCTAGACCCT GATAATTGAT TTGCCCTTCA
GTTGAAATTT GGATTGTGAC AGTGACTAAA GAACACACTT AAATGTGATG CATTTTGATG GGTCTTGGAG AAGTTCTAAG
GGATAGATTT TAAATGTGTG ACATTAGTCC AATCCTGACA TCACTTTTAA TCCAAGACCT TAATACATAC GATTTCAGTC
ATTTTTCTTA TATAATGACT TATGTTATTT TGTACTTAAC GTTGGATTTA GACTTACACT TGAATTATTC TACCTACATT
TCAGGTACGT GGGTTGCCAA CTGTGTTCTT TATCAGCCCT GATCCAAACA AAGATGCTAT ACGAACTGAG GGACTTATAC
CAATACAGAT GATGAGGGAC ATCATTGACA AGGATATGTG AAACAGGAAA GAGTTATGGT CAGCTGACAC AGTTTCTGTT
CCTGGATCCT GCAATATGCT GTCTGGTGCA ATGGCATCAT ATCTTGGACA GAATTGAAGT GCTAACCGAT TCATATGATT
TTGGCTCTTG AAGGGTTATA AAATTGCATG ATATTTATGT GTAAGCTTTG ACCACGACAA TGCTCTGTAG TGTGCCACAT
GTGATGTCAA ATGGAAGGAC ATTGCATCAT GTAACACAAT CATGGACTTG CAGCACCCCA TTCATCAAAA TATATAATAT
GGTATTTAAA GGGACAATCT GTGTGTGTTA GGTGGTGACT GAGTTGAGCT TACATGCTTC AAATTTATTA TCTTGTCACC
TTGATGATGT GTTTCTGGGG TGCATTTGAA TGTGACAAGC ATGGTTCTCA TATTCTAGGA AGAAGGGAAA TTCAAAGGGT
GTCTTTGGAA GAATTTACTT TATTTTTATG TTTTTTAGTT TGGCAGCACA AAGTGGTTTG AAAATTATTG TAGTTTCTTT
CAAATTAGCA ATTTTTAACT TAAATCCTAA TAAAAAAAGA AAAAGGGG

>Vigan.07G232100.01
ATTATCACTA TTTAGTGACA GAAAAGAACC TAAGTTAAAG AGAAATTTTG TCTATCTATC TATTCATGAA AGAATAAGTA
GATATGGTAA ACCCCTGTAC TCAAAAACCC TCTTTTCATT GAAGCACTCT GCAAATTCCA AACCAACAAG AATGGTTCTC
TTCCAATGCC ATGCCCCTCA CCACAGCATG GCCATTCTCT CACCCTTCAA TTCCAAACCC CTTTGTGCTT CTCTACCAAA
CCCTTCTTTC ACAGCTCACC ACCACCCTTA TCCTCTCACC ACAACCACTC ACCTAAATAA CAATAAGCCT CTTTCACTCT
CCACAGTACC CAGAAAGTTG CTCTGCAAGC CACCCCAAGG AAAATATATC AGGGATGACT ATCTTGTGAA AAAGTTGTCA
GCTGAGGAAA TCCAGGAGCT GGTGAAGGGG GAAAGAAAAG TTCCTCTTAT TATAGATTTC TATGCAACTT GGTGTGGACC
TTGCATCTTA ATGGCTCAAG AACTTGAAAT GCTTGCAGTT GAGTACGAAA ACAAGGCAGT CTTTGTTAAG GTTGATACTG
ATGACGAGTA TGAATTTTCA CGCGACATGC AGGTACGTGG GTTGCCAACT GTGTTCTTTA TCAGCCCTGA TCCAAACAAA
GATGCTATAC GAACTGAGGG ACTTATACCA ATACAGATGA TGAGGGACAT CATTGACAAG GATATGTGAA ACAGGAAAGA
GTTATGGTCA GCTGACACAG TTTCTGTTCC TGGATCCTGC AATATGCTGT CTGGTGCAAT GGCATCATAT CTTGGACAGA
ATTGAAGTGC TAACCGATTC ATATGATTTT GGCTCTTGAA GGGTTATAAA ATTGCATGAT ATTTATGTGT AAGCTTTGAC
CACGACAATG CTCTGTAGTG TGCCACATGT GATGTCAAAT GGAAGGACAT TGCATCATGT AACACAATCA TGGACTTGCA
GCACCCCATT CATCAAAATA TATAATATGG TATTTAAAGG GACAATCTGT GTGTGTTAGG TGGTGACTGA GTTGAGCTTA
CATGCTTCAA ATTTATTATC TTGTCACCTT GATGATGTGT TTCTGGGGTG CATTTGAATG TGACAAGCAT GGTTCTCATA
TTCTAGGAAG AAGGGAAATT CAAAGGGTGT CTTTGGAAGA ATTTACTTTA TTTTTATGTT TTTTAGTTTG GCAGCACAAA
GTGGTTTGAA AATTATTGTA GTTTCTTTCA AATTAGCAAT TTTTAACTTA AATCCTAATA AAAAAAGAAA AAGGGG

>Vigan.07G232100.01
ATGGTTCTCT TCCAATGCCA TGCCCCTCAC CACAGCATGG CCATTCTCTC ACCCTTCAAT TCCAAACCCC TTTGTGCTTC
TCTACCAAAC CCTTCTTTCA CAGCTCACCA CCACCCTTAT CCTCTCACCA CAACCACTCA CCTAAATAAC AATAAGCCTC
TTTCACTCTC CACAGTACCC AGAAAGTTGC TCTGCAAGCC ACCCCAAGGA AAATATATCA GGGATGACTA TCTTGTGAAA
AAGTTGTCAG CTGAGGAAAT CCAGGAGCTG GTGAAGGGGG AAAGAAAAGT TCCTCTTATT ATAGATTTCT ATGCAACTTG
GTGTGGACCT TGCATCTTAA TGGCTCAAGA ACTTGAAATG CTTGCAGTTG AGTACGAAAA CAAGGCAGTC TTTGTTAAGG
TTGATACTGA TGACGAGTAT GAATTTTCAC GCGACATGCA GGTACGTGGG TTGCCAACTG TGTTCTTTAT CAGCCCTGAT
CCAAACAAAG ATGCTATACG AACTGAGGGA CTTATACCAA TACAGATGAT GAGGGACATC ATTGACAAGG ATATGTGA

>Vigan.07G232100.01
MVLFQCHAPH HSMAILSPFN SKPLCASLPN PSFTAHHHPY PLTTTTHLNN NKPLSLSTVP RKLLCKPPQG KYIRDDYLVK
KLSAEEIQEL VKGERKVPLI IDFYATWCGP CILMAQELEM LAVEYENKAV FVKVDTDDEY EFSRDMQVRG LPTVFFISPD
PNKDAIRTEG LIPIQMMRDI IDKDM*