GBrowse Details

Vigan.07G227800.01

Basic Information:
Name: Vigan.07G227800.01
Multiple alignment
Variant Information
Position: Chr07:30903220..30906911 (+ strand)
Length: 3692
Functional Information:
Description: Similar to Uncharacterized protein. [I1MJN7, Glycine max]
GO: Biological Process: ATP synthesis coupled proton transport (GO:0015986)
Cellular Component: membrane (GO:0016020)
Molecular Function: proton-transporting ATP synthase activity, rotational mechanism (GO:0046933)
InterPro: ATPase, F1 complex, OSCP/delta subunit (IPR000711)
ATPase, F1 complex, OSCP/delta subunit, conserved site (IPR020781)
F1F0 ATP synthase OSCP/delta subunit, N-terminal domain (IPR026015)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:46.54,39.26,155.38,84.41,188.80,190.09,142.56,82.39
Arabidopsis thaliana homolog: AT5G13450.1
Automatic updates:
Name: NM_001249239 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499796 (LOC100499796), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:30903220..30903378 (+ strand)
Length: 159
Type: five_prime_UTR
Position: Chr07:30903379..30903492 (+ strand)
Length: 114
Type: CDS
Position: Chr07:30903650..30903700 (+ strand)
Length: 51
Type: CDS
Position: Chr07:30904089..30904332 (+ strand)
Length: 244
Type: CDS
Position: Chr07:30905828..30905940 (+ strand)
Length: 113
Type: CDS
Position: Chr07:30906250..30906336 (+ strand)
Length: 87
Type: CDS
Position: Chr07:30906432..30906560 (+ strand)
Length: 129
Type: CDS
Position: Chr07:30906561..30906911 (+ strand)
Length: 351
Type: three_prime_UTR

>Vigan.07G227800.01 class=Sequence position=Chr07:30903220..30906911 (+ strand)
AAAAAAAAGT AAAAAAATAA AAAGAATAAC TCTTAAAATT TACTGCTGAG TCTTCATTAG CCCTATTCAG ATTCAGTTTC
CCTTTGCCTT TGTTTCTCTT CCAAACTACA GAACCAAACT CGCTCACTGA AACTCGACAA AATTAGGGTT TCTGCAGTGA
TGGCACTCTG CAATCGCGTC AGATCGGGAA TCTCCCTCTT CAACAAATCC ACCTCCCTCA CTTCCCACCG TTCCAATCTC
CAACGATCTC TCGTTGCCCC TTCCATTTCC CTCGTAAGAA TCATAAACCC AACAATCTCA ATTTTTCTTT CTAGTTTCAC
TTCCGTGCCC TCTATTCGTT TGAAAGTTTT GGAATCTGCG ATTTTTTATT GTTCTTCATT TTTATATTTT GATTCATAAC
TTGCTCTTGT TTCATCCTGT TCTTGTGCAG GCCTCCAGAA ATTATGCTAA CGTGCCCGGA GAAAAGGACC AAAAAGTTAA
GGTATTGGAA TACATTATTT TGGGTTGTAA TTTATTGTGT GTGATTCATT GATGAAACGA ATATGCGTGG AAAACTGTGT
GCGTCGATGT ATTTTCGGCT AAGTATAGTT TGTTGAATGG AGTGGTTATA TTTAGTAGAA TGGGATAGTC CTTCACAGTG
CCGCGAAACA TGTTTTGCAC CCCTGTTGTG ATATCTTGTA TTTAGTGTGT CGATCGGGAT TTCCTTGAAG GAGATACCTT
TGGGTAGCCA AAAGAATCTT CTTTTTGATC ATGTATTCAG TTAGTGCTGG TTGAATGTTT GTACAAAGTT TCTGTCCCCT
GTTGTGCTTG TTGTTTTCCA TGGTTTGATC CAGTTTTTCA TGTATTTTTC CTCTTCTGTT GCTTTTTAGG TTCCTTTGGC
CTTGTATGGA GGTTCAGGAA ACTATGCCTC TGCTTTGTAC ATTGCATCTG TCAAAGCTAA TGCAATCGAA AAGGTCGAGT
CTGAGCTTCT GCAATTTGTT GAGGCAGTAC GGAATAGTTC CAAATTTTCA CAGTTTATAA AGGATTTGTC TGTGGCTAAG
GATGTTAGAG TAAAAGTCAT CCAGGAGGTT TGTGGAGAAG CTAAGTTTTC GGACGTGACA AAGAACTTCC TTGGTAAGAT
AAGTCTTCAA TCCTCTAGTT GGCATGACAC GTGTGAATTT CCTTCTGACT GTAGAGCATT AATCCTGAAA GAAGTAATAA
TTTCTTCTCT TATATATTGT CTCTTCACAT GCTCATACTA TTGTACATAT TTTCTTTTTA AACATTTTAG CTATTCAACG
TGAATTTTAG CTAATTTTTG TGGGCAACTC TGCTTTCTTT GTACTGTTGT TAATTAGAAA TCATTCTAAT GTTACTGTGG
AAGCTATCTC AGCTTATTGT TACGCACTCA CATCTTTCAG TGGATTTTAT ATTTGCATCT TCTTTTTACT TCCCATGATT
GGAAATTATA CTTAAAGTAT AGCTCCTTAT CACCCAATTG TCTCCAATGT TTATTCCAGT CATATTAAAT TTACTGTTAA
TTGACAGTTT AAGTGTGAAT CACCAGAATT CCGAGCTCTC TTTCCACTTA GCTTTTTCTG CATGTGAGTT ATAAAACATT
GAAACACACT TTCTAGTGTT TGAAATAGTA ATATTTATTT ACTGACAGAT GGAATTGGGG AGGATTACTG CAAGACTATA
ACCTCCTCTC ACAGAGCAAG TGCTTCAGAG AATAAATACT CTCTGCCTAA TAAACCCTTA GCTGAAAAAG TATAAAACAA
CAGGAACGCC CAGATACCCC TAACCTTCGT TAACCCCTCT AAAGCTTGCT GTCACCCTTT TTGGGTCATG GCAATCATGC
CAAAACAGTA AGGAAAACAT AAAAGAATTT AGTCATGTGC TCCTTCCTTA ATTCGCATTG TATTTCTCCT AGTATAGATG
CTAATCTTAG GTCACTTCCC TGACGCTCAA GCTGAACCTA TTCTACTTAG GTGACTTTAT GCTAATTATA GGAGTTTATC
TAGAATAATA CTATTAAGAA GGATGCCTTT GGGAGTGTTA CACAAAAAGA AAAGGTCTGA AATATAACAA GTTATCTCTC
TCCGTCTCTG GTTAAGCATG ACAGCCATTA CTGTCAAAAT ATTATGTCAG GGTTCTTGCA TGTATCAGTA TTTGAATAGA
ATATAGATAG AGATGGGCAA AAAACAGGAA TTGAACTCTC GCATGGTGGA TTCACCATCC ACTGCCTTTA TCAATTTGGT
CACATCATTC TTTATAATAT GTAAAAATGA TCTATATCTC AATTTCTTAA TTAATCATAA AATAAATAAA AAGAAAACGT
ATGTATAAAT CTGAATAATA GATTACTAAT AAAATAAAAA AGGTGCAATA TTAAAAAAGG TTGTTTGCAT TCTGGTTGAA
ACTTAAAATA CGTGTTACAA TAGCGTTAGT CTTCAAGGCT ACGTGTCATG GCTTTTGTTG GAACTCTTGT CTTGGGAGAC
TGTTAGTTAC TTTGGTTCCA CTTTTGTAGC ACTTCAAACT GTCTCATTTA TCTTGAACTA AATTAGATGC TAGCTACATT
ATTTTTTTTA TACCATTGTT CATTGATTAT TATTTTTTGC TTGTGAAGTT ATTGCTGCTG AGAATGGAAG GCTTAAAAAC
ATAGACACCA TTGCAAAGAA GTTTAGGGCG TTGGCAATGG CATACAAGGG AGAAGTGAAA GCGACTGTAA CCACCGTTGT
TGTAAGTAGT GTTGTACCTT TTCGAGTATT TTTACATAGT AAAATTGTAG CGTTGAACAT CTAATTCTGA ACGAGAGCTA
GTATATCAGC ATGCCCTACA CCTACAGATG AATGCTGTTT TATTGGTTAG TAGTTTCTTC TGTAAACTGT CTAAATGGTC
ATGCTAATTT CGGTAGTTGG GCATGTTAGT GTTTTGTAAA ATTGTATTGA GATTGGCTTT TGGATGCTTT AGTTGGATGT
AATATGAAGT TATGTCGCTG GACAACAGTG TGATTAGTTA TTTCCTTACC TAACTATATT TTTTTGCCAG GCTCTTCCCC
CTGAAGAGGA AAAGGCTTTG AAGGACACTC TTCAAGAAAT AATGGGTTCT GGAGCAAAGG TTCATCTTGA ACAGAAGGTA
CTAGTGTGAA ATTTTGTCCA CCTGAGATTA TGTGCGTGCG TCTCCTGAAT TCAAGTTGTT AATTTCGGAC TTTTTTCCTT
TTGATTTTTC AGATTGATCC TAGCATACTT GGTGGTATTG TGCTGGAATT TAACCAGAAG GTCTTTGACA TGTCTATTAA
GACCAGGGCA CAACAGATGG AGAGGATCCT CCGAGAGCCC GTATCCATTG CCAACATCTA AATGACAACA TTCTGTGTGT
TGTCATGGTT TAACTTACAT TCTTGTTCAT TATAAATTGT GTGGATACAG ATTTTTATGC GATGGAATGT CATCATTTTG
CAAATAAAAG CTACCTCTTT CCAACTTCTT GTTATACCTT GTCGCAATCT CAGTGTAACA GAATATATTT TGATTTGGAA
TTTTTAAGAG GTTTTTATTA GTTGGTGTTG CCTGGCAATC TGAAATTGTT GCGTCCTAAT ACAAAGTAAA GGAAGTCAAG
TCTGTATGCA TTGGATGGGT ACTATTAGTG AGTATGAAAT TAACATCTAC TTTTTGCTAT TATAAGATTT CACGATTTTA
GTTTTGCATA AA

>Vigan.07G227800.01
AAAAAAAAGT AAAAAAATAA AAAGAATAAC TCTTAAAATT TACTGCTGAG TCTTCATTAG CCCTATTCAG ATTCAGTTTC
CCTTTGCCTT TGTTTCTCTT CCAAACTACA GAACCAAACT CGCTCACTGA AACTCGACAA AATTAGGGTT TCTGCAGTGA
TGGCACTCTG CAATCGCGTC AGATCGGGAA TCTCCCTCTT CAACAAATCC ACCTCCCTCA CTTCCCACCG TTCCAATCTC
CAACGATCTC TCGTTGCCCC TTCCATTTCC CTCGCCTCCA GAAATTATGC TAACGTGCCC GGAGAAAAGG ACCAAAAAGT
TAAGGTTCCT TTGGCCTTGT ATGGAGGTTC AGGAAACTAT GCCTCTGCTT TGTACATTGC ATCTGTCAAA GCTAATGCAA
TCGAAAAGGT CGAGTCTGAG CTTCTGCAAT TTGTTGAGGC AGTACGGAAT AGTTCCAAAT TTTCACAGTT TATAAAGGAT
TTGTCTGTGG CTAAGGATGT TAGAGTAAAA GTCATCCAGG AGGTTTGTGG AGAAGCTAAG TTTTCGGACG TGACAAAGAA
CTTCCTTGTT ATTGCTGCTG AGAATGGAAG GCTTAAAAAC ATAGACACCA TTGCAAAGAA GTTTAGGGCG TTGGCAATGG
CATACAAGGG AGAAGTGAAA GCGACTGTAA CCACCGTTGT TGCTCTTCCC CCTGAAGAGG AAAAGGCTTT GAAGGACACT
CTTCAAGAAA TAATGGGTTC TGGAGCAAAG GTTCATCTTG AACAGAAGAT TGATCCTAGC ATACTTGGTG GTATTGTGCT
GGAATTTAAC CAGAAGGTCT TTGACATGTC TATTAAGACC AGGGCACAAC AGATGGAGAG GATCCTCCGA GAGCCCGTAT
CCATTGCCAA CATCTAAATG ACAACATTCT GTGTGTTGTC ATGGTTTAAC TTACATTCTT GTTCATTATA AATTGTGTGG
ATACAGATTT TTATGCGATG GAATGTCATC ATTTTGCAAA TAAAAGCTAC CTCTTTCCAA CTTCTTGTTA TACCTTGTCG
CAATCTCAGT GTAACAGAAT ATATTTTGAT TTGGAATTTT TAAGAGGTTT TTATTAGTTG GTGTTGCCTG GCAATCTGAA
ATTGTTGCGT CCTAATACAA AGTAAAGGAA GTCAAGTCTG TATGCATTGG ATGGGTACTA TTAGTGAGTA TGAAATTAAC
ATCTACTTTT TGCTATTATA AGATTTCACG ATTTTAGTTT TGCATAAA

>Vigan.07G227800.01
ATGGCACTCT GCAATCGCGT CAGATCGGGA ATCTCCCTCT TCAACAAATC CACCTCCCTC ACTTCCCACC GTTCCAATCT
CCAACGATCT CTCGTTGCCC CTTCCATTTC CCTCGCCTCC AGAAATTATG CTAACGTGCC CGGAGAAAAG GACCAAAAAG
TTAAGGTTCC TTTGGCCTTG TATGGAGGTT CAGGAAACTA TGCCTCTGCT TTGTACATTG CATCTGTCAA AGCTAATGCA
ATCGAAAAGG TCGAGTCTGA GCTTCTGCAA TTTGTTGAGG CAGTACGGAA TAGTTCCAAA TTTTCACAGT TTATAAAGGA
TTTGTCTGTG GCTAAGGATG TTAGAGTAAA AGTCATCCAG GAGGTTTGTG GAGAAGCTAA GTTTTCGGAC GTGACAAAGA
ACTTCCTTGT TATTGCTGCT GAGAATGGAA GGCTTAAAAA CATAGACACC ATTGCAAAGA AGTTTAGGGC GTTGGCAATG
GCATACAAGG GAGAAGTGAA AGCGACTGTA ACCACCGTTG TTGCTCTTCC CCCTGAAGAG GAAAAGGCTT TGAAGGACAC
TCTTCAAGAA ATAATGGGTT CTGGAGCAAA GGTTCATCTT GAACAGAAGA TTGATCCTAG CATACTTGGT GGTATTGTGC
TGGAATTTAA CCAGAAGGTC TTTGACATGT CTATTAAGAC CAGGGCACAA CAGATGGAGA GGATCCTCCG AGAGCCCGTA
TCCATTGCCA ACATCTAA

>Vigan.07G227800.01
MALCNRVRSG ISLFNKSTSL TSHRSNLQRS LVAPSISLAS RNYANVPGEK DQKVKVPLAL YGGSGNYASA LYIASVKANA
IEKVESELLQ FVEAVRNSSK FSQFIKDLSV AKDVRVKVIQ EVCGEAKFSD VTKNFLVIAA ENGRLKNIDT IAKKFRALAM
AYKGEVKATV TTVVALPPEE EKALKDTLQE IMGSGAKVHL EQKIDPSILG GIVLEFNQKV FDMSIKTRAQ QMERILREPV
SIANI*