GBrowse Details

Vigan.07G223100.01

Basic Information:
Name: Vigan.07G223100.01
Multiple alignment
Variant Information
Position: Chr07:30316209..30321308 (+ strand)
Length: 5100
Functional Information:
Description: Similar to Uncharacterized protein. [B9U5I2, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: DNA binding (GO:0003677)
InterPro: NAC domain (IPR003441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.69,0.18,7.96,46.34,13.11,1.91,70.77,1.62
Arabidopsis thaliana homolog: AT1G56010.2
Automatic updates:
Name: KT031214 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max clone HN_CCL_61 NAC transcription factor (Glyma08g18470.1) mRNA, partial cds.
PubMed ID: 26268547 NCBI(pubmed)
Status: Known Variant
Name: KT031221 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max clone HN_CCL_172 NAC transcription factor (Glyma15g40510.1) mRNA, partial cds.
PubMed ID: 26268547 NCBI(pubmed)
Status: Known Variant
Name: NM_001248972 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcriptional factor NAC35 (NAC35), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001251326 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max NAC domain protein (NAC34), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:30316209..30316833 (+ strand)
Length: 625
Type: five_prime_UTR
Position: Chr07:30316834..30316999 (+ strand)
Length: 166
Type: CDS
Position: Chr07:30319556..30319830 (+ strand)
Length: 275
Type: CDS
Position: Chr07:30320592..30321053 (+ strand)
Length: 462
Type: CDS
Position: Chr07:30321054..30321308 (+ strand)
Length: 255
Type: three_prime_UTR

>Vigan.07G223100.01 class=Sequence position=Chr07:30316209..30321308 (+ strand)
GTCATCTCTC ATCACCACTG TGTTCATTTG AGACTGGCTG CTTATGTGCC AACTCTCTAA TTATTATTCT CACAAATTCA
TTTGAGAGTT ATAGTCATCT TGTTCAATTC AAATTTGATG TGGTCTTACT ATATCTCTCT GTTTTAGTGA CATATTTACT
ATACTTTTTT TAACATTATC TATGATATGC AAAATACAAA AAACTTTCCC ATGATTACTG TGTTATTGAA GTTGAATAAA
GTATGTTTGA TAGTGTAAAT TGTGTTGAAT GAGTAATTAG GAAGTGTGTA AAAGTATGCG TTTGTAGTGT TTGTGATAAT
GCGAAGATAA AAATAAGTTG CGAGAGGAAG AAATGAAGGA GTTGGGAGTG ATTGGTTTGT GCACGTCATC ATTCATTGAG
TTGAGACGCA GAACTTAATG ACCATCCTAC CCTTCTTCCA TGCAAACAAT TACATGTTGA CTTAGCCACT TGTGATCCCT
CTCCATTTAT ATATACTCCT TTCTTCTCCT CCTTCCTTTA TTATACTTCT CCAAATTTCT CACTTCAACT TTCAACCTCT
TTTCTCTGTC ATCTTTCTCT TTCTCTTTCT CTTTCTTCTA TCTACACCTG TATTCAAACC AAAACATGAG CAACATAAGC
ATGGTAGAGG CAAAGTTGCC ACCAGGGTTC AGGTTCCATC CAAGAGATGA AGAGCTTGTG TGTGATTACT TGATGAAGAA
GGTCACACAC AATGATTCCC TTCTCATGAT AGATGTTGAC CTTAACAAGT GTGAACCTTG GGATATTCCT GGTGAGTAGT
ATTCTTCTTC TTATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATTT GTATATCATG
CATTCTCTGA TATAAACTAT TAATCATGTT ACATGCCATG TTTCTTATAA CTTCTCTATA TATATGTATG ATGATTAGAG
TCTTGACACA ATTCATTTAG TTTTTCTTCT TATAAGTGAA ACTGGGAAAG ATTCTGCTTG AGCCAGAAAA CTTTGTGTGG
TTTTCTTCAC CTCACAATCA AGGACAAAGT CACCCCACAT GATACTTATA ATGGGCATGC AGCATGCTTG ATCCATTCCA
GTTTCCTATT ACGGTTGATA AAGTACAAAA TGAGTTGTTG CTTTCATTTG TTTTGAATTC TTGTGATGAG GGGGTGAGGT
GATGATAGCA ACTGCAATGG CTATTATAGA TCCCAATCTA TACATGCACT TCTGATAGTG CTTTGATGGC AAACAATATA
TAGCTGCCAT CTGTAACTAG TGAGACATTA CAGAATACCT CTAATTCTTA CACATCAATT CATCAGAAAA TTATGGTTCA
TCATCAACTT TTCATTAACC TTCTGGTTTA TGACATGATT CTGTTTGCTT GGTGAAAGAA CAACATCAAA ACCGTTCATC
CTTTTTCTTT CTGATATATC AGTAATTCCA TGTGTGATGT ATGATCCATG TTAGTTGAAT ATTTTCTTCC TTGTTAATAA
TTGGAAAAAC ATCACTGTTG TCAGTTTGCA TTTTCTTGTG GGACATAACT TTAATTTTCA GTTTGCACTT CTGTACTATA
TTATATAATA AAGATAAAAT ATATTAGAGA AGCTATTTTT ATTTTAATAA AAAAAATTGT CTTCCGTACT TAATAATTAT
TAATGATATA TATGAAAATG TTAATAAGGA ATTGTGGATG CAGATACAGT GCTCTCTCAT TGAAAGGGAT CTGTGCACAG
TTAGGTTGGA AACTTTGAAT GGGAAGCTCT AAAAATCATA TATGTGCATG TACATATATA TATATATATA TATATATATA
TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TATAGATAGA TATAGTTTAT ATATGATAAT
ATTGTAATAT TATCCAACGG TTAGTGCATG ATATACATCA CCTTCATAAC TTTTTTTCAG TTTTGAAAAT TTTGACTCAT
TGAATTTTGT CCTATTATAA AGTGTTTGAC AGTGATTTTT TCACCAAAAT AATTCAAATA ATGATTTTCA TTGCAAAAAC
ACACCTGCAC ATGAACATCA CCCCCTTACA TGTCATATTA AAGTGATTGA ACTCTCCCAA GCCTTATCAC TATTCTAGCT
GGATCTCACC ATGTTCATAG TACTTTCATG TCAAAAACAA TTACACTGTA AGATTTGACT TATCATAAGA AACACAATTA
GATTTACATT TTCTCTTTAA CTTTCTTGTC CTGATTGCCT TTGTTTTTCC CCCCTTCATC AGTTGAATAA TAATTTGCAG
CAACTATTAC TTTACTGATA ATTTAATCCC TTATGTAAAT TTTATCTCCA AACAGGAAAA ATGATCTCTT TCCTTCTTAA
TTTTTAAATA TTTTTAAAAG CACTTAAAAT ACCTGTGTAT TTATTTATTT TGGTACCACA TGAATAATTA TTGAGGTGCT
TAATAACATT TTTTTTATCA ACAAGGACAA ATAGAGATTT CAGGCCTGAT ATGATGGGTC AACATTGCTT TGGTGTGCTA
GGCCATGTGT TCATAGTTTA CATTATTATA GAAATAATAC AAACTGTTTG ATTATGAAAT CAACATAATT AGTTTTGTAT
TTTATATAAG CATGTCATAT AGGAAAAGAA GCTGATAAGG ATAGGTAAAT CAGAAGAAAC AAGAGCAATT AATGGAAGAA
TTATAAGCTG GTTATAAATA GGGGCCTATC TGAATAGTAA ACAGAATAAT TTGTATTCAG ATAATAATAA TTGCTTCTCA
TCAAGAACGA TTTGGTTTTT GTATTTTTCT TTAAACTGTT TTCTGATTGA TTATTATATA TACGTGTGTG CATTTCTAAA
ATAACCCAGA CTCTATTATA CAATGGAATA ATATGCATAT AATAACTTTT ATTTCCTTGT TCTGCCAAAT CAAAATTTTC
AATTCTTCTA ATAAGACAAA GTAAAGAAAA CCGTACTCAT TTAATTTAGG ATTATATTAT AAACAAAAAG ATAATATTGT
TAATGTGAAC AATTGTTTTT AACTAATCAT AGTTGACTTG AACACACGAC ACACCTTATT GACCTAACTG CACATGTTAC
TCTTCTCACT GAAATCAAGA GATTATACAT CAGCTGAAAA ATATAAGCAC CCCTTTCTTT TCTATACATT TGAGTCACTT
TTTAACTTCA ACTTACATAG TAACAATGAT ATTCTACAAC ACAACATACA ATTTTTTTTC TCTACAAATT ACTTATAATG
TATCATTATT TTGGCAATGA TATTCTTAGA TTGTTGATAG TAATTCTGTG TTGTAATGGT TATGCAGACA CAGCATGTGT
GGGAGGGAAA GAGTGGTATT TCTATACACA AAGAGACCGT AAGTATGCAA CAGGATTACG CACAAACCGT GCCACTGCCT
CAGGGTACTG GAAGGCCACA GGGAAGGACA GGCCTATCCT ACGCAAGGGC ACCCTTGTTG GCATGAGGAA GACTTTGGTG
TTCTATCAAG GAAGGGCACC CAAAGGGAGA AAAACTGAGT GGGTGATGCA TGAGTTTCGC ATTGAAGGGC CCCATGGACC
TCCTAAAGTT TCTTCTTCTA AGGTATATAT ATATATATAT ACACTAATGG AATGAGTTTA AGTCTTAGTG TGTAACATTA
TCAACTGATT ATATATTATC ATTGATATTG AACAATTTTA TGATGAGATA ACAGTGATTA TATATTTATT CTGACTGAAT
AAAATATGAA AAGGATCTGG TTTCTTTGTT CTCTAAACAT GTTTCATTTA CATGCATTTA TCTGAAGTAT TTTATGTTAT
GTTGTGACAA CATTTTATTC CAGCTAATGC ATATTGGACC AAAATGAGTA AGCAATGGGG AACCTGTTTT TCCATTAACC
ACTTTGAATG GTCAGTATAT ACATAGAATA TTATGTTATA CATAGACTTT AGGGAAGGAC CTTGTTTGGT TTCCTTTGCA
TGCATCAGGG AGGCAGCTAG TGATTTGCAA TAAAAAATTT GAGGACTTTT GACTTTTAGG GATAGTTTTT GCTCTGTGCC
AAAACCAAAT TTGTCTCACT TGGCTATTGG CTAGAATGTG ACTACATAAG ATATATGGGG TAGCTGACCT AAGAAGATCC
TATTGGATTT TTTTATTTTA CACTTATGTA AGCCTATGAA AGCACCAAAT TCTTCCATGT GTATGGTATT TGGCTTTGTG
TTGAGAGCAG CCACTACACA CACACACACA CATATATATT ATAAGATCAA TCAAATTGTT TTCCTTTCAC TTTATTAACT
TTTTGGCCTA ATCCAAAATT AAAAGAGGTT TGCTTAAACA ATGTGCACAT TATGTGAATA CAGGAAGACT GGGTTTTGTG
TAGAGTGTTC TACAAAAACA GAGAAGTTTC AGCCAAACCT AGCATGGGTA GCTGCTATGA AGACACAGGC TCTTCATCTC
TTCCTGCATT AATGGACTCT TACATTAGTT TTGATCAAAC TCAAGCTCAT GCAGATGAGT TTGAGCAAGT GCCCTGCTTC
TCCATTTTCT CTCAGAACCA AGCAAACCCT ATTTTCAACC ACATGACAAC CATGGAGCCT AAATTACCTG CGACTGCATA
TGGAGGAGGA GCACCGAATT TGGGTTACTG CTTAGACCCT TTATCCTGTG ACAGAAAAGT GTTGAAAGCT GTTTTGAGTC
AGATCACAAA GATGGAAAGG AATCCTCTGA ACCAAAGTCT CAAAGGGTCT CCAAGCTTTG GGGAAGGAAG CTCAGAGAGT
TATTTATCTG AAGTGGGGAT GCCTCACCTT TGGAACAATT ACTGATGTGG GACTTCATTC CCCAATGCCA CCATGGCAAA
CAAAAATTAA AACAAGAAAA CAAAAAATGA AGATGAAATT AATCCATTGT TTGAAGTGAT GGTGAGTGCC TATGTTTTTA
CCTGTGGTGT TTGGCTATTA CTATGATACA CATCCCTCCA TTATGTGTCC CAATATATTA GGAAAATGGG ACTTGTAATT
CAAACTTATA AATATTTGTA GTTAATTCTA GTTAGTGAAT GATTTTTTTT TGTTGCCAAA 

>Vigan.07G223100.01
GTCATCTCTC ATCACCACTG TGTTCATTTG AGACTGGCTG CTTATGTGCC AACTCTCTAA TTATTATTCT CACAAATTCA
TTTGAGAGTT ATAGTCATCT TGTTCAATTC AAATTTGATG TGGTCTTACT ATATCTCTCT GTTTTAGTGA CATATTTACT
ATACTTTTTT TAACATTATC TATGATATGC AAAATACAAA AAACTTTCCC ATGATTACTG TGTTATTGAA GTTGAATAAA
GTATGTTTGA TAGTGTAAAT TGTGTTGAAT GAGTAATTAG GAAGTGTGTA AAAGTATGCG TTTGTAGTGT TTGTGATAAT
GCGAAGATAA AAATAAGTTG CGAGAGGAAG AAATGAAGGA GTTGGGAGTG ATTGGTTTGT GCACGTCATC ATTCATTGAG
TTGAGACGCA GAACTTAATG ACCATCCTAC CCTTCTTCCA TGCAAACAAT TACATGTTGA CTTAGCCACT TGTGATCCCT
CTCCATTTAT ATATACTCCT TTCTTCTCCT CCTTCCTTTA TTATACTTCT CCAAATTTCT CACTTCAACT TTCAACCTCT
TTTCTCTGTC ATCTTTCTCT TTCTCTTTCT CTTTCTTCTA TCTACACCTG TATTCAAACC AAAACATGAG CAACATAAGC
ATGGTAGAGG CAAAGTTGCC ACCAGGGTTC AGGTTCCATC CAAGAGATGA AGAGCTTGTG TGTGATTACT TGATGAAGAA
GGTCACACAC AATGATTCCC TTCTCATGAT AGATGTTGAC CTTAACAAGT GTGAACCTTG GGATATTCCT GACACAGCAT
GTGTGGGAGG GAAAGAGTGG TATTTCTATA CACAAAGAGA CCGTAAGTAT GCAACAGGAT TACGCACAAA CCGTGCCACT
GCCTCAGGGT ACTGGAAGGC CACAGGGAAG GACAGGCCTA TCCTACGCAA GGGCACCCTT GTTGGCATGA GGAAGACTTT
GGTGTTCTAT CAAGGAAGGG CACCCAAAGG GAGAAAAACT GAGTGGGTGA TGCATGAGTT TCGCATTGAA GGGCCCCATG
GACCTCCTAA AGTTTCTTCT TCTAAGGAAG ACTGGGTTTT GTGTAGAGTG TTCTACAAAA ACAGAGAAGT TTCAGCCAAA
CCTAGCATGG GTAGCTGCTA TGAAGACACA GGCTCTTCAT CTCTTCCTGC ATTAATGGAC TCTTACATTA GTTTTGATCA
AACTCAAGCT CATGCAGATG AGTTTGAGCA AGTGCCCTGC TTCTCCATTT TCTCTCAGAA CCAAGCAAAC CCTATTTTCA
ACCACATGAC AACCATGGAG CCTAAATTAC CTGCGACTGC ATATGGAGGA GGAGCACCGA ATTTGGGTTA CTGCTTAGAC
CCTTTATCCT GTGACAGAAA AGTGTTGAAA GCTGTTTTGA GTCAGATCAC AAAGATGGAA AGGAATCCTC TGAACCAAAG
TCTCAAAGGG TCTCCAAGCT TTGGGGAAGG AAGCTCAGAG AGTTATTTAT CTGAAGTGGG GATGCCTCAC CTTTGGAACA
ATTACTGATG TGGGACTTCA TTCCCCAATG CCACCATGGC AAACAAAAAT TAAAACAAGA AAACAAAAAA TGAAGATGAA
ATTAATCCAT TGTTTGAAGT GATGGTGAGT GCCTATGTTT TTACCTGTGG TGTTTGGCTA TTACTATGAT ACACATCCCT
CCATTATGTG TCCCAATATA TTAGGAAAAT GGGACTTGTA ATTCAAACTT ATAAATATTT GTAGTTAATT CTAGTTAGTG
AATGATTTTT TTTTGTTGCC AAA

>Vigan.07G223100.01
ATGAGCAACA TAAGCATGGT AGAGGCAAAG TTGCCACCAG GGTTCAGGTT CCATCCAAGA GATGAAGAGC TTGTGTGTGA
TTACTTGATG AAGAAGGTCA CACACAATGA TTCCCTTCTC ATGATAGATG TTGACCTTAA CAAGTGTGAA CCTTGGGATA
TTCCTGACAC AGCATGTGTG GGAGGGAAAG AGTGGTATTT CTATACACAA AGAGACCGTA AGTATGCAAC AGGATTACGC
ACAAACCGTG CCACTGCCTC AGGGTACTGG AAGGCCACAG GGAAGGACAG GCCTATCCTA CGCAAGGGCA CCCTTGTTGG
CATGAGGAAG ACTTTGGTGT TCTATCAAGG AAGGGCACCC AAAGGGAGAA AAACTGAGTG GGTGATGCAT GAGTTTCGCA
TTGAAGGGCC CCATGGACCT CCTAAAGTTT CTTCTTCTAA GGAAGACTGG GTTTTGTGTA GAGTGTTCTA CAAAAACAGA
GAAGTTTCAG CCAAACCTAG CATGGGTAGC TGCTATGAAG ACACAGGCTC TTCATCTCTT CCTGCATTAA TGGACTCTTA
CATTAGTTTT GATCAAACTC AAGCTCATGC AGATGAGTTT GAGCAAGTGC CCTGCTTCTC CATTTTCTCT CAGAACCAAG
CAAACCCTAT TTTCAACCAC ATGACAACCA TGGAGCCTAA ATTACCTGCG ACTGCATATG GAGGAGGAGC ACCGAATTTG
GGTTACTGCT TAGACCCTTT ATCCTGTGAC AGAAAAGTGT TGAAAGCTGT TTTGAGTCAG ATCACAAAGA TGGAAAGGAA
TCCTCTGAAC CAAAGTCTCA AAGGGTCTCC AAGCTTTGGG GAAGGAAGCT CAGAGAGTTA TTTATCTGAA GTGGGGATGC
CTCACCTTTG GAACAATTAC TGA

>Vigan.07G223100.01
MSNISMVEAK LPPGFRFHPR DEELVCDYLM KKVTHNDSLL MIDVDLNKCE PWDIPDTACV GGKEWYFYTQ RDRKYATGLR
TNRATASGYW KATGKDRPIL RKGTLVGMRK TLVFYQGRAP KGRKTEWVMH EFRIEGPHGP PKVSSSKEDW VLCRVFYKNR
EVSAKPSMGS CYEDTGSSSL PALMDSYISF DQTQAHADEF EQVPCFSIFS QNQANPIFNH MTTMEPKLPA TAYGGGAPNL
GYCLDPLSCD RKVLKAVLSQ ITKMERNPLN QSLKGSPSFG EGSSESYLSE VGMPHLWNNY *