GBrowse Details

Vigan.07G220900.01

Basic Information:
Name: Vigan.07G220900.01
Multiple alignment
Variant Information
Position: Chr07:30086565..30087708 (+ strand)
Length: 1144
Functional Information:
Description: Similar to Uncharacterized protein. [C6TAT2, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.43,33.55,114.50,306.97,69.62,17.30,4.42,214.27
Automatic updates:
Name: NM_001249557 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase GST 9 (LOC547950), mRNA.
PubMed ID: 11080288 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr07:30086565..30086683 (+ strand)
Length: 119
Type: five_prime_UTR
Position: Chr07:30086684..30086998 (+ strand)
Length: 315
Type: CDS
Position: Chr07:30087089..30087433 (+ strand)
Length: 345
Type: CDS
Position: Chr07:30087434..30087708 (+ strand)
Length: 275
Type: three_prime_UTR

>Vigan.07G220900.01 class=Sequence position=Chr07:30086565..30087708 (+ strand)
CAAGAACATT CCAGAACTAT CTCCAAATTT TTGTGTGGTT ATAAATATCA TCACCTCTCC TGTTAGTGCA AGGTATCTCT
AGCAACAAAG GCAGTTCAGA ACCTGAGTTG GATACAGTAA TGGCAGACGA GGTTGTTCTG TTGGATACAT GGGCCAGCAT
GTTTGGGATG AGGGTTAGGA TTGCATTGGC AGAAAAGGGT ATTAAGTACG AATGGAAGGA AGAGGATCTG AGAAACAAGA
GCGCTTTACT TCTGCAGATG AACCCTGTTC ACAAGAAGAT TCCAGTTCTT ATCCATAATG GGAAACCCAT CTGCGAATCT
GCAATAATAG TGCAGTACAT CGATGAGGTC TGGAACCACA ACCCTAAAAT CATGCCCTCT GACCCATACG AAAGAGCTCA
AGCTAGATTC TGGATGGATT ACATTGATAA AAAGGTTTGT GCTTTTCGTT TGTTGTCGTC TCTTTTTGTT CTGTTTTAAA
TTTTGTTTTT GTTAGCAATT CTGATTTTGT GATATTGGTT GCAGGTGTAT GATACATGGA GGAAACTGTG GCTTTCTACT
GGAGAGGAGC GTGAGACATT GAAGAAGGAG TTTATCTCTA TCTTTAAGCA ACTGGAAGAG ACACTTGGTA ACAAACCTTT
TTTTGGGGGT GACATGTTTG GCTTTGTTGA TGTTGGTCTG ATCCCTTATT ATAGTTGGTT TTATTCGTAT GAGACGTATG
GTAACTTCAA AATGGAAGAA GAATGTCCTA AACTCATAGC TTGGGCCAAG AGATGCATGG AGAGAGAGAC AGTGTCCAAA
ACACTTCCTG ATGAAAAGAA GGTTTATGCT TTTATCGACG GAATAAAGAA AGTCCTTGAT TCAAAATAGA GGAGTTTCAT
GAACTAATCA AATCAAAATT TGCACTTTAA ATATGGTACT AAAAGGTCTT GTATAATTTT AGCTTGGGTT TTTTCTGTCT
TGGGTGATTT ATGGTTTGAT GGACACTTTG GTGTGTCTGC TCTGTTTTAG ATTATGGGAA GATATGAATG TTGTTAAGTG
TGCAATTACA ATCAATAAAA CCTCTTTCTA TTAGTTGTTC CATGTACTAG TCAAAACTAT GTTTCAATCT TCTTATTGTT
ATTCCCCTAA TATTATAGTA TTTG

>Vigan.07G220900.01
CAAGAACATT CCAGAACTAT CTCCAAATTT TTGTGTGGTT ATAAATATCA TCACCTCTCC TGTTAGTGCA AGGTATCTCT
AGCAACAAAG GCAGTTCAGA ACCTGAGTTG GATACAGTAA TGGCAGACGA GGTTGTTCTG TTGGATACAT GGGCCAGCAT
GTTTGGGATG AGGGTTAGGA TTGCATTGGC AGAAAAGGGT ATTAAGTACG AATGGAAGGA AGAGGATCTG AGAAACAAGA
GCGCTTTACT TCTGCAGATG AACCCTGTTC ACAAGAAGAT TCCAGTTCTT ATCCATAATG GGAAACCCAT CTGCGAATCT
GCAATAATAG TGCAGTACAT CGATGAGGTC TGGAACCACA ACCCTAAAAT CATGCCCTCT GACCCATACG AAAGAGCTCA
AGCTAGATTC TGGATGGATT ACATTGATAA AAAGGTGTAT GATACATGGA GGAAACTGTG GCTTTCTACT GGAGAGGAGC
GTGAGACATT GAAGAAGGAG TTTATCTCTA TCTTTAAGCA ACTGGAAGAG ACACTTGGTA ACAAACCTTT TTTTGGGGGT
GACATGTTTG GCTTTGTTGA TGTTGGTCTG ATCCCTTATT ATAGTTGGTT TTATTCGTAT GAGACGTATG GTAACTTCAA
AATGGAAGAA GAATGTCCTA AACTCATAGC TTGGGCCAAG AGATGCATGG AGAGAGAGAC AGTGTCCAAA ACACTTCCTG
ATGAAAAGAA GGTTTATGCT TTTATCGACG GAATAAAGAA AGTCCTTGAT TCAAAATAGA GGAGTTTCAT GAACTAATCA
AATCAAAATT TGCACTTTAA ATATGGTACT AAAAGGTCTT GTATAATTTT AGCTTGGGTT TTTTCTGTCT TGGGTGATTT
ATGGTTTGAT GGACACTTTG GTGTGTCTGC TCTGTTTTAG ATTATGGGAA GATATGAATG TTGTTAAGTG TGCAATTACA
ATCAATAAAA CCTCTTTCTA TTAGTTGTTC CATGTACTAG TCAAAACTAT GTTTCAATCT TCTTATTGTT ATTCCCCTAA
TATTATAGTA TTTG

>Vigan.07G220900.01
ATGGCAGACG AGGTTGTTCT GTTGGATACA TGGGCCAGCA TGTTTGGGAT GAGGGTTAGG ATTGCATTGG CAGAAAAGGG
TATTAAGTAC GAATGGAAGG AAGAGGATCT GAGAAACAAG AGCGCTTTAC TTCTGCAGAT GAACCCTGTT CACAAGAAGA
TTCCAGTTCT TATCCATAAT GGGAAACCCA TCTGCGAATC TGCAATAATA GTGCAGTACA TCGATGAGGT CTGGAACCAC
AACCCTAAAA TCATGCCCTC TGACCCATAC GAAAGAGCTC AAGCTAGATT CTGGATGGAT TACATTGATA AAAAGGTGTA
TGATACATGG AGGAAACTGT GGCTTTCTAC TGGAGAGGAG CGTGAGACAT TGAAGAAGGA GTTTATCTCT ATCTTTAAGC
AACTGGAAGA GACACTTGGT AACAAACCTT TTTTTGGGGG TGACATGTTT GGCTTTGTTG ATGTTGGTCT GATCCCTTAT
TATAGTTGGT TTTATTCGTA TGAGACGTAT GGTAACTTCA AAATGGAAGA AGAATGTCCT AAACTCATAG CTTGGGCCAA
GAGATGCATG GAGAGAGAGA CAGTGTCCAA AACACTTCCT GATGAAAAGA AGGTTTATGC TTTTATCGAC GGAATAAAGA
AAGTCCTTGA TTCAAAATAG 

>Vigan.07G220900.01
MADEVVLLDT WASMFGMRVR IALAEKGIKY EWKEEDLRNK SALLLQMNPV HKKIPVLIHN GKPICESAII VQYIDEVWNH
NPKIMPSDPY ERAQARFWMD YIDKKVYDTW RKLWLSTGEE RETLKKEFIS IFKQLEETLG NKPFFGGDMF GFVDVGLIPY
YSWFYSYETY GNFKMEEECP KLIAWAKRCM ERETVSKTLP DEKKVYAFID GIKKVLDSK*