GBrowse Details

Vigan.07G210100.01

Basic Information:
Name: Vigan.07G210100.01
Multiple alignment
Variant Information
Position: Chr07:29130985..29133367 (+ strand)
Length: 2383
Functional Information:
Description: Similar to uncharacterized protein. [C6SWU6, Glycine max]
GO: Cellular Component: integral to membrane (GO:0016021)
InterPro: SWEET sugar transporter (IPR004316)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.65,0.52,8.71,25.40,8.75,2.71,5.04,11.79
Arabidopsis thaliana homolog: AT3G14770.1
Automatic updates:
Name: NM_001250567 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sugar efflux transporter GmSWEET34 (GMSWEET34), transcript variant 1, mRNA.
PubMed ID: 26162601 NCBI(pubmed)
18927222 NCBI(pubmed)
Status: Known Variant
Name: NM_001357951 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sugar efflux transporter GmSWEET29 (GMSWEET29), mRNA.
PubMed ID: 26162601 NCBI(pubmed)
Status: Known Variant
Name: NM_001357967 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sugar efflux transporter GmSWEET34 (GMSWEET34), transcript variant 2, mRNA.
PubMed ID: 26162601 NCBI(pubmed)
18927222 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr07:29130985..29131188 (+ strand)
Length: 204
Type: five_prime_UTR
Position: Chr07:29131189..29131249 (+ strand)
Length: 61
Type: CDS
Position: Chr07:29131336..29131372 (+ strand)
Length: 37
Type: CDS
Position: Chr07:29131472..29131688 (+ strand)
Length: 217
Type: CDS
Position: Chr07:29131797..29131955 (+ strand)
Length: 159
Type: CDS
Position: Chr07:29132044..29132163 (+ strand)
Length: 120
Type: CDS
Position: Chr07:29132289..29132402 (+ strand)
Length: 114
Type: CDS
Position: Chr07:29132403..29133367 (+ strand)
Length: 965
Type: three_prime_UTR

>Vigan.07G210100.01 class=Sequence position=Chr07:29130985..29133367 (+ strand)
TGAGGTTAGC GTTAATCATA AATTTGATTT TGAAGAGAGA GACAAAGGAG GTACCTTTGT GAGAGAAAGG GGACGACCTC
AAGTCTATGC CTCAAAATTT GTTACAGATA GAAAGTGTAT CGTATAATTT GCTTAATTGA GGGTTTGATT TCATTTAGTT
AACTCTGTTG TGCCTATCTG GAGTTGGTGA TTCAGGATCC ATCAATGTCT CTGTTTGCTG TTTTTTCCAT TTGTACAGTT
GCCAAGGATG CAGCGGGGGT TGCAGGTGCT TTTATGATTG CTATATTAAA AGCAGAGCAA TTTTAGTTGT TGATCATCAC
ATTTGCACTA TATTAACTTG CTTATTTGCA GGGAATGTGT TTGCTTTTGG GTTGTTTGTG TCTCCCATGT AAGTTTCATC
ATGGATTTTG AAGAACTGTT GAATTCAGAA GAATTTTTTG TTTATTTCTG TTCATTGTGT AACTCTTGTG CTGTTTTTAA
TACGCAGACC CACATTTAGG AGAATTATCA GAAATGGGTC GACGGAGATG TTCTCAGGGT TGCCATATAT TTATTCGCTC
TTGAACTGCT TGATCTGCAT GTGGTATGGC ACACCTCTGA TATCTGCTGA TAATTTGTTG GTTACAACTG TTAACTCAAT
TGGAGCAGTC TTTCAGTTTG TGTATATAAT TCTCTTCCTG ATGTATGCTG AGAAATCAAA GAAGGTTAGC TCTCTGATAC
TGTTGGAATT TGGAAGATTA TTTATTTTAT GTGATTGAGG ACAAATATCA GTGGTTAATT CTTAAACTGT ATTTTATACT
TCCGTTGAGT AGGTGAGAAT GATTGTATTG TTGGTGGCAG TTCTTGGAGT ATTTGCAATC ATATTACTTG GAAGCTTGGA
AATAGATGAC ATTCAAATGC GTCGGTTCTT TGTGGGATTT TTGAGCTGCG CGTCTCTCAT TTCGATGTTT GCCTCTCCAT
TGTTTATAAT TGTGAGTGTG TTGTTACCTT AATTCCATGT ATAATATGAC CATTATCAAT TAGGGTCAAT TTACTTACAT
TACATGCTAT ATTTCTCAGA GATTGGTCAT TCAGACAAAG AGTGTTGAAT TCATGCCATT TTATCTCTCA CTTTCCACCT
TCCTAATGAG CACCTCTTTC TTTCTTTATG GACTGTTCAA CGATGATGCC TTCATTTATG TAAGTTTGCT TCCAACTCCT
ATTTTTATCT ATTAATTCTT GGATACCCAT TTTAGTTTGG AATGTTCATT TTGGTGACTT ATATTTGCAG TACAACTGTA
CCTAAATCTT TACTTGATCT GTAGGTGCCA AATGGGATAG GAACTGTTTT GGGAGTGACA CAGTTGGTAT TATACTTCTA
CTTCGAGAAT AAATCCAGAG ACAGCTCCAG AGAACCTCTG ATAGTGTCAT ATGTATGATC AGTTCTGCTG AAAAGACCAA
AGGCAAAAGC AAATATGTAA TATTTCTGGT CTTTGCCATA GGCATTCTTT TCATGAGAAT CTTCTCAATG CACAAGATAG
TTTTCCTACT GAATCAATAT ATGGACTTAA TAAATAAGTA TTTTGATTCC AAAAAAGAAA AACAATGGTG CAGCATATTC
ATTTTGGTGT TCAGTAAATC GGAGTTTATG ATTGGTTCCC TCTCCTTCAT GATCTTTTTA GTTTCATTTA TGTGGTTTCC
TTTTCTCTAC TTGTTTCTGG GTACGAAAAT ATGTTTTCCA TGAAATTAGT GGATAAAATC CTTGCAGCCG GAGGGTGATG
TTAGTCTCTT CTTCTGACAA TCTATGGATT ATAATTGAAT TGTATGTGAG CAGGAACTAT TTGTATGGGT AGTTTTCCTA
GTAGACAACA TGCTAGTTGA CTTGAAGCAT AATCCATGTT ATATTTGTTT CCAATTTTCC ATATTTTCCA AGTGTCCTTT
TAAGCTTTTT GTTCATTATT TATCTCTTTG TGACTTAACT TTTTCGAGTT TTGATGAATC CTGTAACCTA TATTTACTAT
TTAGTAACAA GGTGTCATTT AATGAAATAG AAAAAAATGA GGAAAGATTC ATTCAGCGTA GATCTGTTAT TAACTGGAAC
AATGTCGTCA TCAAACATGT AAAATATCAA TCTCTATCTG TAATACTCTA GTAAGAAAAG GAAAACAACA CAAGTGCTAC
AGTAATAAAT AACTCTTTCT AGTGTAGTTC TTACGGTGAC ATCTTCTTCC TGCACAAAAC AGATTTCAGG GTAAGAAAAG
ACCTTTGGCT GCTAAATGTG GTCTGAAACT GGAGTTGGCA ACATCCCTGT TTGATTCAAT TTGTAGGAGC AATTACTGTT
TGAGGGTGAC AACCAGAAGT TGTGACTATG AATAACTTGA AATTTTGTGT ATCAGAATTA CCA

>Vigan.07G210100.01
TGAGGTTAGC GTTAATCATA AATTTGATTT TGAAGAGAGA GACAAAGGAG GTACCTTTGT GAGAGAAAGG GGACGACCTC
AAGTCTATGC CTCAAAATTT GTTACAGATA GAAAGTGTAT CGTATAATTT GCTTAATTGA GGGTTTGATT TCATTTAGTT
AACTCTGTTG TGCCTATCTG GAGTTGGTGA TTCAGGATCC ATCAATGTCT CTGTTTGCTG TTTTTTCCAT TTGTACAGTT
GCCAAGGATG CAGCGGGGGT TGCAGGGAAT GTGTTTGCTT TTGGGTTGTT TGTGTCTCCC ATACCCACAT TTAGGAGAAT
TATCAGAAAT GGGTCGACGG AGATGTTCTC AGGGTTGCCA TATATTTATT CGCTCTTGAA CTGCTTGATC TGCATGTGGT
ATGGCACACC TCTGATATCT GCTGATAATT TGTTGGTTAC AACTGTTAAC TCAATTGGAG CAGTCTTTCA GTTTGTGTAT
ATAATTCTCT TCCTGATGTA TGCTGAGAAA TCAAAGAAGG TGAGAATGAT TGTATTGTTG GTGGCAGTTC TTGGAGTATT
TGCAATCATA TTACTTGGAA GCTTGGAAAT AGATGACATT CAAATGCGTC GGTTCTTTGT GGGATTTTTG AGCTGCGCGT
CTCTCATTTC GATGTTTGCC TCTCCATTGT TTATAATTAG ATTGGTCATT CAGACAAAGA GTGTTGAATT CATGCCATTT
TATCTCTCAC TTTCCACCTT CCTAATGAGC ACCTCTTTCT TTCTTTATGG ACTGTTCAAC GATGATGCCT TCATTTATGT
GCCAAATGGG ATAGGAACTG TTTTGGGAGT GACACAGTTG GTATTATACT TCTACTTCGA GAATAAATCC AGAGACAGCT
CCAGAGAACC TCTGATAGTG TCATATGTAT GATCAGTTCT GCTGAAAAGA CCAAAGGCAA AAGCAAATAT GTAATATTTC
TGGTCTTTGC CATAGGCATT CTTTTCATGA GAATCTTCTC AATGCACAAG ATAGTTTTCC TACTGAATCA ATATATGGAC
TTAATAAATA AGTATTTTGA TTCCAAAAAA GAAAAACAAT GGTGCAGCAT ATTCATTTTG GTGTTCAGTA AATCGGAGTT
TATGATTGGT TCCCTCTCCT TCATGATCTT TTTAGTTTCA TTTATGTGGT TTCCTTTTCT CTACTTGTTT CTGGGTACGA
AAATATGTTT TCCATGAAAT TAGTGGATAA AATCCTTGCA GCCGGAGGGT GATGTTAGTC TCTTCTTCTG ACAATCTATG
GATTATAATT GAATTGTATG TGAGCAGGAA CTATTTGTAT GGGTAGTTTT CCTAGTAGAC AACATGCTAG TTGACTTGAA
GCATAATCCA TGTTATATTT GTTTCCAATT TTCCATATTT TCCAAGTGTC CTTTTAAGCT TTTTGTTCAT TATTTATCTC
TTTGTGACTT AACTTTTTCG AGTTTTGATG AATCCTGTAA CCTATATTTA CTATTTAGTA ACAAGGTGTC ATTTAATGAA
ATAGAAAAAA ATGAGGAAAG ATTCATTCAG CGTAGATCTG TTATTAACTG GAACAATGTC GTCATCAAAC ATGTAAAATA
TCAATCTCTA TCTGTAATAC TCTAGTAAGA AAAGGAAAAC AACACAAGTG CTACAGTAAT AAATAACTCT TTCTAGTGTA
GTTCTTACGG TGACATCTTC TTCCTGCACA AAACAGATTT CAGGGTAAGA AAAGACCTTT GGCTGCTAAA TGTGGTCTGA
AACTGGAGTT GGCAACATCC CTGTTTGATT CAATTTGTAG GAGCAATTAC TGTTTGAGGG TGACAACCAG AAGTTGTGAC
TATGAATAAC TTGAAATTTT GTGTATCAGA ATTACCA

>Vigan.07G210100.01
ATGTCTCTGT TTGCTGTTTT TTCCATTTGT ACAGTTGCCA AGGATGCAGC GGGGGTTGCA GGGAATGTGT TTGCTTTTGG
GTTGTTTGTG TCTCCCATAC CCACATTTAG GAGAATTATC AGAAATGGGT CGACGGAGAT GTTCTCAGGG TTGCCATATA
TTTATTCGCT CTTGAACTGC TTGATCTGCA TGTGGTATGG CACACCTCTG ATATCTGCTG ATAATTTGTT GGTTACAACT
GTTAACTCAA TTGGAGCAGT CTTTCAGTTT GTGTATATAA TTCTCTTCCT GATGTATGCT GAGAAATCAA AGAAGGTGAG
AATGATTGTA TTGTTGGTGG CAGTTCTTGG AGTATTTGCA ATCATATTAC TTGGAAGCTT GGAAATAGAT GACATTCAAA
TGCGTCGGTT CTTTGTGGGA TTTTTGAGCT GCGCGTCTCT CATTTCGATG TTTGCCTCTC CATTGTTTAT AATTAGATTG
GTCATTCAGA CAAAGAGTGT TGAATTCATG CCATTTTATC TCTCACTTTC CACCTTCCTA ATGAGCACCT CTTTCTTTCT
TTATGGACTG TTCAACGATG ATGCCTTCAT TTATGTGCCA AATGGGATAG GAACTGTTTT GGGAGTGACA CAGTTGGTAT
TATACTTCTA CTTCGAGAAT AAATCCAGAG ACAGCTCCAG AGAACCTCTG ATAGTGTCAT ATGTATGA

>Vigan.07G210100.01
MSLFAVFSIC TVAKDAAGVA GNVFAFGLFV SPIPTFRRII RNGSTEMFSG LPYIYSLLNC LICMWYGTPL ISADNLLVTT
VNSIGAVFQF VYIILFLMYA EKSKKVRMIV LLVAVLGVFA IILLGSLEID DIQMRRFFVG FLSCASLISM FASPLFIIRL
VIQTKSVEFM PFYLSLSTFL MSTSFFLYGL FNDDAFIYVP NGIGTVLGVT QLVLYFYFEN KSRDSSREPL IVSYV*