GBrowse Details

Vigan.07G207400.01

Basic Information:
Name: Vigan.07G207400.01
Multiple alignment
Variant Information
Position: Chr07:28641518..28645512 (- strand)
Length: 3995
Functional Information:
Description: Similar to Phosphoglycerate kinase. [I1MJC7, Glycine max]
GO: Biological Process: glycolysis (GO:0006096)
Molecular Function: phosphoglycerate kinase activity (GO:0004618)
InterPro: Phosphoglycerate kinase (IPR001576)
Phosphoglycerate kinase, N-terminal (IPR015824)
Phosphoglycerate kinase, C-terminal (IPR015901)
Phosphoglycerate kinase, conserved site (IPR015911)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:270.42,358.86,370.79,175.89,475.40,618.41,408.70,255.22
Arabidopsis thaliana homolog: AT1G56190.1, AT1G79550.1, AT3G12780.1
Automatic updates:
Name: NM_001354838 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phosphoglycerate kinase (LOC100796458), mRNA.
PubMed ID: 18927222 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr07:28641518..28641890 (- strand)
Length: 373
Type: three_prime_UTR
Position: Chr07:28641891..28642085 (- strand)
Length: 195
Type: CDS
Position: Chr07:28643301..28643459 (- strand)
Length: 159
Type: CDS
Position: Chr07:28643684..28644001 (- strand)
Length: 318
Type: CDS
Position: Chr07:28644097..28644357 (- strand)
Length: 261
Type: CDS
Position: Chr07:28644456..28644533 (- strand)
Length: 78
Type: CDS
Position: Chr07:28645195..28645389 (- strand)
Length: 195
Type: CDS
Position: Chr07:28645390..28645512 (- strand)
Length: 123
Type: five_prime_UTR

>Vigan.07G207400.01 class=Sequence position=Chr07:28641518..28645512 (- strand)
CTGAGATTTC AACCTTACTT TTCGTGAGTT TCGCCCTCAA AGTTTGATTC TTTTTCCGGT TTCCTCTTCA GGGTTCTGAT
CCCTTTCTGG TTTCGGATTT GCGCTTGTGC AGATTTAAGG AGAATGGCTA CGAAGAGGAG CGTGGGAACT TTGAAGGAGG
CTGATTTGAA GGGGAAAAGG GTGTTCGTTA GAGTCGATCT GAACGTGCCT TTGGATGATG ACTTAAAGAT CACCGATGAC
ACTAGAATCC GTGCTGCAGT TCCCACCATC AAGTACTTGA CTGGTTATGG TGCCAAAGTG ATCCTCTCTA GCCATTTGGT
ATGGTATATG TAGCTATTTT CGTGGTTTTA ATGTGTCTGG GTGTGTTTTG TTTTAGACTA CGAATGATTT GGAATCTGGG
TTTGTGTGAT CGTTGGATTT AATGTTTTGT TACTATTGTG GTTTTAGGTT GATTCTCTAT TGGCTATGTG TGTTTGTTTA
ATTGATGGTA ACTGGGAAAA CCATGTCTTT CACTGTCTTT TTTTTTTTGC TTTTAATTTT TGAGGATTCA AATCTGAAAG
GGAGAAAGAG GAAACTTAAT TGTTACTAAC ATATTGATGC TTGTTATATC TATAATTGTT TTTTGTCCAT TTCTTTCTTA
AATGAGAGGA TCTCTTGTTT TATAAGTGTA GAAGTAAGTA ATTTTTATTG TTGAGTTTTA TTTCCGTTGC TCCGAGCTTG
GGTAACATGC CTCTTTATTG AAATTGGTTT TAAAGTGATC AATTCAGTCT ATATAACGAG ATCTGTAAAA CATGTCAATT
TGAATGACTG TTTTGCAACT AATGTAGCTG TTGCGATATC TTTCTTTTAT TTTATTATTA ACCTTTTTCT TTTGGGTGTA
TTAGTTAACG AGTTAACATA AAACCATGGA TGTAAGATAA ATGTGATGTG AGTAGTAGTG ACTTGAAACG TGATTTTTCC
TTGACTATCC TGTTTCCAGG GACGTCCGAA AGGTGTTACA CCTAAATACA GTTTGAAGCC TCTTGTGCCA AGGCTTTCTC
AACTTCTAGA ACTTGAGGTT TGCCTCTTAT CTGTTCTAGT TATTTATTTA GATGTTCCCC CTTTTTATTT TCTGATGTAC
TGTTACTTCA TTGTGCCACT GTCTCTTGAT TATAGGTCAA GATTGCAAAT GACAGTATTG GGGAGGAAGT TGAGAAGTTG
GTTGCAGGAC TTCCAGAAGG TGGTGTTTTG CTTCTAGAGA ATGTTAGATT CTACAAAGAG GAAGAAAAGA ATGATCCTGA
GTTTGCAAAG AAGCTGGCTT CTCTTGCTGA TATCTATGTA AATGATGCAT TTGGCACTGC CCACAGAGCT CATGCTTCCA
CAGAAGGAGT GGCCAAATAT TTGAAGCCTT CTGTTGCAGG ATTCCTTATG CAGAAGGTTT GTAGGACGTA ATTGTTAGTT
CCATTATATA TGTTGGCTAA CTAATGTAAT TTATGCAGTT GATTAATCTG TTATTTGTTT AACTGTTTCA GGAACTTGAT
TATCTAGTTG GAGCCGTGTC TAACCCCAAG AAGCCATTTG CTGCTATTGT GGGTGGGTCA AAGGTGTCTT CCAAGATTGG
AGTTATTGAA TCCTTGTTGG AGAAAGTTAA TATTCTTTTG CTTGGTGGAG GAATGATCTT TACCTTTTAC AAGGCTCAGG
GTCATTCCGT TGGGTCATCT CTTGTGGAAG AAGATAAACT AGACCTTGCA ACTTCACTTC TTGAAAAGGC CAAGGCTAAA
GGGGTTTCTT TGTTGCTTCC AACTGATGTG GTCATAGCAG ACAAGTTTTC TGCTGATGCT AACAGCAAGG TACTAGGTTT
TTGCTTGTTT AGTCCAGTGT TGCTAATTTT CACCCCTCCC TTTATCATGG GAAGGCTCTC TTCAAACAAA TGATCAACCA
CGGACTACGG AACATTTGTG AAATCTATGA TTTAGAGGGT TTATTTTACT CATTTCAGAC ATTCCAATGC ACTTATAAAT
AGTAATATTT CAATTGTTGA GATACACTTT TAACTTTATT TATATATTCT CAGATTGTTC CAGCCTCAAG CATTCCCGAT
GGATGGATGG GATTGGATAT TGGTCCTGAT TCCATCAAGA CATTTAGTGA AGCATTGGAT ACCACCCAAA CTATCATTTG
GAATGGACCA ATGGGCGTTT TTGAGTTTGA AAAGTTTGCC GCAGGAACAG AGGTATGAAT GATAAAATAT AGTAAATCAT
CCATTATAAT TTTGAAAGCA TAATCCAAAT TAATGAAACA ATTAAATGTG ATCTACTACA AAATGGATTG ACAGTGATTT
ATAGCAAAAC ATTCTTGCAA TGTAATATAA TATCTTTCAA ACAAATAAGC AAAACTTAGT TTGCTACTTA TTTTGTTTTT
ATTATTTTAT AAAGGAAAGT CACTTTTCTT CCTGTGGACG TGTGTGGGAG GACACATAGG ATTTACTATG CACTTGAGTC
TTTTATAATG TATAATGAGA AGATTCACCT CTTACCTTTT CACTTATTCA ATGTTGGACT TGTTAGATAT ATTAGATTAT
TGTATATCTT ATACTTATCT TTTATCTTCA TTTACTTATG TTATTTTATT ATTTTTTATT TATTTTGGGT TTATTCTATA
TTTCTTTCTT TATAAATAAA ATATCCTATG TATATTCTTT ACATAAGAGA AATTAATTTC GTACATAGTA TTTTATTATA
TATTTAATAT TGTAGTTAGG TTTATTAGGT ATATGTTGTT TGTTAGGTAT TGTTCTATTT GTTATCAGAC TGGTATGGGA
TCATCTATAA ATGTCTAGTA TAAATGTCTA GTCATGTATA TTTCTTTGCA CGAGGAAAGT GTATTGGAAG TCCATTGACT
AATGATAAGA TTAGTTTATA GTATATAAAT GGATACAAAT TTTATCTTAC AAATTGATTT TGTGGAGTTC ATTTAAATTT
AAAATTTATT TTTTACCATG GTATTGTGGA GTTCATTTAA ATTTAAAATT TATTTTTTAC CATGGTATTG TGGAGTTCAT
TTAAGTTTAA AGTTTATTTT TAACATGGTA TTAGAACCAT GAATTAAATG TATATTTTTT GGTGTGAGAA AAGTGTATAG
AAAGTCTACA TTGACTAATG ATAAGATTAG TTTAGAATAT ATAAGTAGAT AGAAACTTTA TCTTCGGTCT CGTCTTATAA
ATTGGTCTTA GAGTTAGGTT TAAAATTTAT ATTTACACCT GTGTAAGTAT ATATTTCTAT ATATTTATAT TTAATTGATA
TTAATATATG CTTATAACAG AAGGAAATGC TATCAGTGAA AAAACTTTTG TATACTGTGA AATGTCAAAA TGCATATATA
AGAAGTGAAT GATAGTAGTG AATTTCAGTT ACCATTTCTT GATGACTATA CACCCTTTTG TGCACAGGCT ATAGCCAAGA
AACTGGCAGA GCTTAGTGGG AAGGGAGTAA CAACCATCAT TGGAGGAGGT GACTCTGTGG CTGCTGTGGA GAAGGTTGGA
CTTGCAGATA AGATGAGCCA CATCTCCACT GGTGGTGGTG CCAGCTTAGA GCTTCTTGAG GGGAAGCAAC TCCCTGGTGT
CCTTGCTCTT GATGATGCTT GAGCAAATTC CTTTGAAGTT TATGCTTTTA TTGTTACATT GAGAGCTGTA ACTCATGTAG
AGGCTTAATA GATGATAGGT TTCAAAATAA GAGGGTTTTG TGGCATTTAT GTTGCCGAAT TGAGCTTTAT TGTAGTTCTT
GTACAATGTC CATTTCCGAA GGAGTTTCCT TTTGTTATGT TCCTTTGGTT CTCAGTGTTG TTTTGGGTTT GCTTCCAAAT
TGTTATTTTT AATTAGAAAT TTATCTGCAT GAAATGTCTT GGCTGGTTTG TAGTTTATGC TATTATTATG GATGAGTTCC
AGCAACTTAG GATAAAAAGA AAACTTGTGT GGGGGTTGTA TATTATGACA AAGAATATTT TAATTGGATA CAAGG

>Vigan.07G207400.01
CTGAGATTTC AACCTTACTT TTCGTGAGTT TCGCCCTCAA AGTTTGATTC TTTTTCCGGT TTCCTCTTCA GGGTTCTGAT
CCCTTTCTGG TTTCGGATTT GCGCTTGTGC AGATTTAAGG AGAATGGCTA CGAAGAGGAG CGTGGGAACT TTGAAGGAGG
CTGATTTGAA GGGGAAAAGG GTGTTCGTTA GAGTCGATCT GAACGTGCCT TTGGATGATG ACTTAAAGAT CACCGATGAC
ACTAGAATCC GTGCTGCAGT TCCCACCATC AAGTACTTGA CTGGTTATGG TGCCAAAGTG ATCCTCTCTA GCCATTTGGG
ACGTCCGAAA GGTGTTACAC CTAAATACAG TTTGAAGCCT CTTGTGCCAA GGCTTTCTCA ACTTCTAGAA CTTGAGGTCA
AGATTGCAAA TGACAGTATT GGGGAGGAAG TTGAGAAGTT GGTTGCAGGA CTTCCAGAAG GTGGTGTTTT GCTTCTAGAG
AATGTTAGAT TCTACAAAGA GGAAGAAAAG AATGATCCTG AGTTTGCAAA GAAGCTGGCT TCTCTTGCTG ATATCTATGT
AAATGATGCA TTTGGCACTG CCCACAGAGC TCATGCTTCC ACAGAAGGAG TGGCCAAATA TTTGAAGCCT TCTGTTGCAG
GATTCCTTAT GCAGAAGGAA CTTGATTATC TAGTTGGAGC CGTGTCTAAC CCCAAGAAGC CATTTGCTGC TATTGTGGGT
GGGTCAAAGG TGTCTTCCAA GATTGGAGTT ATTGAATCCT TGTTGGAGAA AGTTAATATT CTTTTGCTTG GTGGAGGAAT
GATCTTTACC TTTTACAAGG CTCAGGGTCA TTCCGTTGGG TCATCTCTTG TGGAAGAAGA TAAACTAGAC CTTGCAACTT
CACTTCTTGA AAAGGCCAAG GCTAAAGGGG TTTCTTTGTT GCTTCCAACT GATGTGGTCA TAGCAGACAA GTTTTCTGCT
GATGCTAACA GCAAGATTGT TCCAGCCTCA AGCATTCCCG ATGGATGGAT GGGATTGGAT ATTGGTCCTG ATTCCATCAA
GACATTTAGT GAAGCATTGG ATACCACCCA AACTATCATT TGGAATGGAC CAATGGGCGT TTTTGAGTTT GAAAAGTTTG
CCGCAGGAAC AGAGGCTATA GCCAAGAAAC TGGCAGAGCT TAGTGGGAAG GGAGTAACAA CCATCATTGG AGGAGGTGAC
TCTGTGGCTG CTGTGGAGAA GGTTGGACTT GCAGATAAGA TGAGCCACAT CTCCACTGGT GGTGGTGCCA GCTTAGAGCT
TCTTGAGGGG AAGCAACTCC CTGGTGTCCT TGCTCTTGAT GATGCTTGAG CAAATTCCTT TGAAGTTTAT GCTTTTATTG
TTACATTGAG AGCTGTAACT CATGTAGAGG CTTAATAGAT GATAGGTTTC AAAATAAGAG GGTTTTGTGG CATTTATGTT
GCCGAATTGA GCTTTATTGT AGTTCTTGTA CAATGTCCAT TTCCGAAGGA GTTTCCTTTT GTTATGTTCC TTTGGTTCTC
AGTGTTGTTT TGGGTTTGCT TCCAAATTGT TATTTTTAAT TAGAAATTTA TCTGCATGAA ATGTCTTGGC TGGTTTGTAG
TTTATGCTAT TATTATGGAT GAGTTCCAGC AACTTAGGAT AAAAAGAAAA CTTGTGTGGG GGTTGTATAT TATGACAAAG
AATATTTTAA TTGGATACAA GG

>Vigan.07G207400.01
ATGGCTACGA AGAGGAGCGT GGGAACTTTG AAGGAGGCTG ATTTGAAGGG GAAAAGGGTG TTCGTTAGAG TCGATCTGAA
CGTGCCTTTG GATGATGACT TAAAGATCAC CGATGACACT AGAATCCGTG CTGCAGTTCC CACCATCAAG TACTTGACTG
GTTATGGTGC CAAAGTGATC CTCTCTAGCC ATTTGGGACG TCCGAAAGGT GTTACACCTA AATACAGTTT GAAGCCTCTT
GTGCCAAGGC TTTCTCAACT TCTAGAACTT GAGGTCAAGA TTGCAAATGA CAGTATTGGG GAGGAAGTTG AGAAGTTGGT
TGCAGGACTT CCAGAAGGTG GTGTTTTGCT TCTAGAGAAT GTTAGATTCT ACAAAGAGGA AGAAAAGAAT GATCCTGAGT
TTGCAAAGAA GCTGGCTTCT CTTGCTGATA TCTATGTAAA TGATGCATTT GGCACTGCCC ACAGAGCTCA TGCTTCCACA
GAAGGAGTGG CCAAATATTT GAAGCCTTCT GTTGCAGGAT TCCTTATGCA GAAGGAACTT GATTATCTAG TTGGAGCCGT
GTCTAACCCC AAGAAGCCAT TTGCTGCTAT TGTGGGTGGG TCAAAGGTGT CTTCCAAGAT TGGAGTTATT GAATCCTTGT
TGGAGAAAGT TAATATTCTT TTGCTTGGTG GAGGAATGAT CTTTACCTTT TACAAGGCTC AGGGTCATTC CGTTGGGTCA
TCTCTTGTGG AAGAAGATAA ACTAGACCTT GCAACTTCAC TTCTTGAAAA GGCCAAGGCT AAAGGGGTTT CTTTGTTGCT
TCCAACTGAT GTGGTCATAG CAGACAAGTT TTCTGCTGAT GCTAACAGCA AGATTGTTCC AGCCTCAAGC ATTCCCGATG
GATGGATGGG ATTGGATATT GGTCCTGATT CCATCAAGAC ATTTAGTGAA GCATTGGATA CCACCCAAAC TATCATTTGG
AATGGACCAA TGGGCGTTTT TGAGTTTGAA AAGTTTGCCG CAGGAACAGA GGCTATAGCC AAGAAACTGG CAGAGCTTAG
TGGGAAGGGA GTAACAACCA TCATTGGAGG AGGTGACTCT GTGGCTGCTG TGGAGAAGGT TGGACTTGCA GATAAGATGA
GCCACATCTC CACTGGTGGT GGTGCCAGCT TAGAGCTTCT TGAGGGGAAG CAACTCCCTG GTGTCCTTGC TCTTGATGAT
GCTTGA

>Vigan.07G207400.01
MATKRSVGTL KEADLKGKRV FVRVDLNVPL DDDLKITDDT RIRAAVPTIK YLTGYGAKVI LSSHLGRPKG VTPKYSLKPL
VPRLSQLLEL EVKIANDSIG EEVEKLVAGL PEGGVLLLEN VRFYKEEEKN DPEFAKKLAS LADIYVNDAF GTAHRAHAST
EGVAKYLKPS VAGFLMQKEL DYLVGAVSNP KKPFAAIVGG SKVSSKIGVI ESLLEKVNIL LLGGGMIFTF YKAQGHSVGS
SLVEEDKLDL ATSLLEKAKA KGVSLLLPTD VVIADKFSAD ANSKIVPASS IPDGWMGLDI GPDSIKTFSE ALDTTQTIIW
NGPMGVFEFE KFAAGTEAIA KKLAELSGKG VTTIIGGGDS VAAVEKVGLA DKMSHISTGG GASLELLEGK QLPGVLALDD
A*