GBrowse Details

Vigan.07G207300.01

Basic Information:
Name: Vigan.07G207300.01
Multiple alignment
Variant Information
Position: Chr07:28630307..28634951 (+ strand)
Length: 4645
Functional Information:
Description: Similar to Phosphoglycerate kinase. [V7BT83, Phaseolus vulgaris]
GO: Biological Process: glycolysis (GO:0006096)
Molecular Function: phosphoglycerate kinase activity (GO:0004618)
InterPro: Phosphoglycerate kinase (IPR001576)
Phosphoglycerate kinase, N-terminal (IPR015824)
Phosphoglycerate kinase, C-terminal (IPR015901)
Phosphoglycerate kinase, conserved site (IPR015911)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:222.31,128.61,88.88,744.42,37.67,161.97,16.75,128.28
Arabidopsis thaliana homolog: AT1G56190.1, AT1G79550.1, AT3G12780.1
Automatic updates:
Name: NM_001360374 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative phosphoglycerate kinase (LOC100801951), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:28630307..28630630 (+ strand)
Length: 324
Type: five_prime_UTR
Position: Chr07:28630631..28631035 (+ strand)
Length: 405
Type: CDS
Position: Chr07:28632377..28632454 (+ strand)
Length: 78
Type: CDS
Position: Chr07:28632573..28632833 (+ strand)
Length: 261
Type: CDS
Position: Chr07:28633053..28633370 (+ strand)
Length: 318
Type: CDS
Position: Chr07:28633534..28633692 (+ strand)
Length: 159
Type: CDS
Position: Chr07:28633986..28634195 (+ strand)
Length: 210
Type: CDS
Position: Chr07:28634196..28634951 (+ strand)
Length: 756
Type: three_prime_UTR

>Vigan.07G207300.01 class=Sequence position=Chr07:28630307..28634951 (+ strand)
GAAAAATGCA GTTTTGTGTT CATTGATTGA TGACATTAGC AGTAATAAAC TAAAATGTTT AAGCAGAAGA GAAATTTATG
GCGGTGTTTG AAGAAGGAAG TGGGTGGAAT AAAAAAAGAG TGAAAAAGCA AGGAAGATCT TGAACCTCTC CTGAACGATA
AGAGAAATCC AAAATCCTCT CACCACACCC AATCGTTCAC CCTTTGTACT TCACGTCCAC ATCTTTCGTC TCTCTCCTTT
CACCAAATAC TATCAAACCT CTTCTTTCGC ACTCGTTTTT TCTTCACACT CACTCAAATC AAACACTCTC TTTCTCTCTC
TGCAATGGCC TCAGCCGCAG CCCCCACCAC TTTCTCTCTG CTCCACTCCG CCACCTCCAC CTCGTCTTCC TCGCGCGTGA
AGCTCTCCTC CTCCCTCCGC GTCCGCCCGC TCACGCGCCA CCTGGGGTTC AGGGTGGCCG ACCCGCTGCT GGCAGCGAAT
GTGGCGGCGC GGGTGGCCGC GGTGAGGGTC GGGAGGGGCA GGAGAGGGGT GGTGTCGATG GCTAAGAAAA GCGTGGGCGA
CCTGACTACT GCGGACTTGA AAGGAAAGAA GGTGTTCGTG AGGGCTGACC TCAACGTCCC GCTCGACGAC AACCAGAACA
TCACTGACGA CACCAGAATC CGAGCCGCCA TTCCCACCAT CAAATACCTC GTTGAAAACG GCGCCAAAGT CATCCTCTCT
AGCCACTTGG TTTGTCTTCT CTCTTTCCTA CGCTCACTTC CGGCATGGTC TGTGTTCTTA TTTTACTCAT CTGATTTTAT
TCTCCTGGAA ATACATAGTA AGAAGTTCCT CCTCATCAGA ATTGAATGAT TCTCGAAAAA TTTGTGCTCA TTTATTTACT
TTTGCAGTGT TATTCAGTTA GAATTAGAGA ATTCGAGTTC CATCTAGATC GGGGTGAAAA GGGTATTGTG CTACTCTTTT
CGTGAAGTTC TGGCAATACA GTATGGAAGC TACTTCTATC TAACCAAAAA TTTTAATAAC TAAAGAAACT TAAGTAGCAT
TTCGAACCAT GTTGTATATT TGCTCCGATG TTTTAAAACG CAGTATGCAA TTTCGGTCTC ATTAAGGTTT TTTGGTGTCC
CCGTGTCCTT GATTTCAGCT GCATTTGGGA TGAGTGCATG AAGGAAGGAT AAAAATAGGA GACTTTAGAC TAGAATAATA
ATTTTATATT TTGTATTCGT TTCTACATTT TTGGAATTAG AGACTTTCTA CGACATTACT TATTGGATGA CTCTAATTAG
TGGATGAACC CAGTAGTCTT GGCTCATAGT ATAAATAGGT TTATGGTAAC TTCTGTAATA GTTTAGGCTC ATACTGGATT
GAATCTTATG TTCTGTGAGT GATATAGGTT CTTATTCTTA TGTTTGAATT GTTAATTCAA GCGTTTGTGA TTGTAACATC
TTTATCTTTC AATCTCCTCT CGCATTTTCT ATTTTTTTAA TAATTGTGTA CAAATTGTTG GAAATGATCC ATTTTCCGTA
ATCCTTGGTG AGGCATTCAT CAAGTTGTCT CCAATTTCCA ACTATATCAG TAATTGTGAG GGAATTGCCA CTGCAAGTTA
TAACCTTGTT GTGCTCATCT TTTGAGGGAA TTTAAGTGAT TTATTTACTT CAAAGAGCTT TTTCTTTTCG AATTTTTTTT
TCTAAAATCA GTCTTTATGC AACTCTGTAT GTAGATTAAC GAGGTTTCGT GAATTTTTTA ATTATTGCCA ATTATGCTGT
ATTTGCCTTG TCATATTTAA TAATTTTGAA GTTTAATTAT ATGCTTTGAG TTTTGGGTCT GTGGTTATTT TCTTAAAAAA
TATTAGGAGA GAAAGGGTGC TTCAATTAGT AGAACAATCT AAATTCTTGT CTTAGATGTG AAATTTGTTG TCAGAAGAAA
TGTCCGGATG GTTGAAAAAA ATTCGATTTT GTTATAGTTT TGGTAATGTT GATGTAGGCT GTCTTGATGC AAGTATAAGA
GTACATTTGT GTCTACTATT ATGGTTGAAC TTGTAAGTTG AATTGTTGCA ATTTTTCATA TAATTTCTAG GGGCGACCGA
AGGGTGTCAC TCCCAAATAC AGCTTGGCTC CTCTTGTATC TCGGATTTCT GAACTCCTTG GTTTCCCGGT ATGTTTATGT
ATTGATCATT GTGGAATATG TATGAAGAGA TCTTTTGAGT GTTGTAATTT TCCTGGTGGT TATGATAATG TTCTTGACTT
ATGTTTTTTA TTTGAATAAT TTGCAGGTTG TCAAGGCTGA GGATAGTATT GGTCCAGAAG TGGAAAAGTT GGTGGCTTCT
CTTCCAGAAG GAGGTGTTCT TCTTCTAGAA AATGTGAGGT TTTACAAGGA GGAAGAAAAG AATGATCCTG AGCATGCAAA
AAAGCTTGCC TCTCTAGCAG ATCTGTTTGT GAATGATGCA TTTGGTACTG CTCATAGGGC ACATGCATCA ACAGAGGGGG
TTACTAAATA CTTGAAACCA TCTGTTGCTG GTTTTCTTTT GCAAAAGGTG TGTTTATCGC TTCGCTTTTA GCTAACTCTA
AAATTCTGCA AAAATAAAGC TCCTGAAAGT TTCAATGCCA CAATACCACC ATTTTCATTG TGAATGATCT TATAAAATTA
ATAAATTTTA TCACTTGATG TAAAATGAAA CTTTACCTAA AATGTCAATT ACTCTACTAG GAAAAGTTTT TAATAACTAT
TTTCACGTGG ATTGTTCATT TTTTAGGAAC TTGATTACCT TGTTGGGGCA GTATCAAGCC CAAAAAGACC ATTTGCTGCC
ATTGTTGGTG GTTCCAAGGT CTCATCTAAA ATTGGAGTGA TTGAGTCACT TTTAGAAAAG GTTGATATCC TTCTTCTTGG
TGGAGGAATG ATCTTCACAT TTTACAAGGC ACAAGGTCTT TCAGTGGGTT CTTCCCTTGT AGAGGAAGAT AAATTGGATC
TTGCTACATC ACTACTTGCA AAAGCCAAGG AAAAGGGGGT GTCTCTCTTG TTACCAAGTG ATGTGGTGAT TGCGGACAAA
TTTGCTCCCG ATGCAAATAG CAAGGTTTGT TTTCTGGTTT CTAAGCTTCT TTAGCTAAAG ATATCGGTCA TAGTAAGTTA
AACCACATAA AATATTAATA ATATTGCAAA CGCTTACTTG TAATATTATT CTTTATTCAA TCTGAATCAT TTGCAACTAG
CAGTTAAATT CTTCCTTAAC CTTTTAGGTC GTGCCAGCAT CTGCCATCCC TGATGGCTGG ATGGGATTGG ATATTGGTCC
AGATTCTGTT AAATCATTCA GTGAAGCATT GGGTACAACC AAAACCATCA TATGGAATGG ACCAATGGGA GTGTTTGAAT
TTGACAAGTT TGCTGTTGGT ACAGAGGTAT GCGAGAACAC ACTAATAAGG AGCTCTGTTC AAATTACATT TTAAAGCAAA
TGTTTTCTGT AAATATAAAC AATGTCCACT CAAATTGATG CGTATACTCT CAGTAATATA CAGTAGGAGT TAGTTTTCGT
GATGTGACTT GTACATCTCC ATAAACTATA TTCTTTTCAT TTATGAAAAT AATGTGTCCG ATTAGGGGTG ATTCAAATGT
CGGCTTACGA ATAACCTATT CTGTTTGGCT AATAAATGTG TGCACCGTAC ATAATTTACA TTTTATACCA TTCTTTCAGG
CTATTGCCAA GAAGCTAGCT GACCTCAGTC AAAATGGAGT CACCACGATT ATTGGAGGAG GTGATTCTGT TGCAGCTGTA
GAGAAAGTTG GAGTTGCCAA TGTCATGAGC CACATATCTA CTGGTGGTGG TGCCAGTTTG GAGTTATTGG AAGGCAAAGA
GCTTCCTGGA GTCCTTGCTC TTGATGAAGC CACACCAGTC CCTGTGTAAG ACAATTTTCA GCTTGGAAAA TTTTCCCATC
CTGAGTTGTC AGTCTTGTGA AAGAGCATGT GTTTTAGGAC CGATCCGAGT CTGTTAGTGT AAATTTAATC ATGCTTGAGT
TATTGACTTC ACTCATAAAT TGCGTGTAAC TGTAAACACT GGCTGAGAGC CATAAATTCA AATAAATCCT TGAGTTGCTG
CCAGAAGCAT TTTGCACTTT GATTTGTCTT ATGTCACACT CCTGACTGGC GCCATTTGGT CCCGGGTACA CTGTAACAAG
TCTTAAACAA CTACGAGGAT TATTGTAGGA ACAGAAGATG AAAGGTATGG TGCAAAATTT GCTGCCAGTG TAATCTAATT
TAAATTCAAA TAAATCTATT GGTTGCTGCC AGAAGCTATT TACACTTTGC TTTTATCTTA TGTCTTCCTG CAAAATCCTT
GAACACGAAC CAAGTTTTTG TCGGCATTGT ATGCATTTCT TTATTTTATC TTCCAGGGGC GAAACTGTTT GCACTCAATG
ACGTGACTGT CATCTGTCAA GAGAGATTGC AACCAATGAT TCTTGTGAAT TTAGACCTTT TAGCCAATGT TTATTTCGGT
TCATTTGACG CTTAAGAGGA TATGAGAAGA TTAGAGAGGA TTGGAATGGT TTGTTTGAGT TGATTTCCTA GAAGTGGCTA
GGAAAGTTCT GGGAGCTCCA CTAGTATTAC TTTCAATGGG TTGTACTTGG ATTTATTTAA TGAAAGATCA ATTTAAACTT
TTGAA

>Vigan.07G207300.01
GAAAAATGCA GTTTTGTGTT CATTGATTGA TGACATTAGC AGTAATAAAC TAAAATGTTT AAGCAGAAGA GAAATTTATG
GCGGTGTTTG AAGAAGGAAG TGGGTGGAAT AAAAAAAGAG TGAAAAAGCA AGGAAGATCT TGAACCTCTC CTGAACGATA
AGAGAAATCC AAAATCCTCT CACCACACCC AATCGTTCAC CCTTTGTACT TCACGTCCAC ATCTTTCGTC TCTCTCCTTT
CACCAAATAC TATCAAACCT CTTCTTTCGC ACTCGTTTTT TCTTCACACT CACTCAAATC AAACACTCTC TTTCTCTCTC
TGCAATGGCC TCAGCCGCAG CCCCCACCAC TTTCTCTCTG CTCCACTCCG CCACCTCCAC CTCGTCTTCC TCGCGCGTGA
AGCTCTCCTC CTCCCTCCGC GTCCGCCCGC TCACGCGCCA CCTGGGGTTC AGGGTGGCCG ACCCGCTGCT GGCAGCGAAT
GTGGCGGCGC GGGTGGCCGC GGTGAGGGTC GGGAGGGGCA GGAGAGGGGT GGTGTCGATG GCTAAGAAAA GCGTGGGCGA
CCTGACTACT GCGGACTTGA AAGGAAAGAA GGTGTTCGTG AGGGCTGACC TCAACGTCCC GCTCGACGAC AACCAGAACA
TCACTGACGA CACCAGAATC CGAGCCGCCA TTCCCACCAT CAAATACCTC GTTGAAAACG GCGCCAAAGT CATCCTCTCT
AGCCACTTGG GGCGACCGAA GGGTGTCACT CCCAAATACA GCTTGGCTCC TCTTGTATCT CGGATTTCTG AACTCCTTGG
TTTCCCGGTT GTCAAGGCTG AGGATAGTAT TGGTCCAGAA GTGGAAAAGT TGGTGGCTTC TCTTCCAGAA GGAGGTGTTC
TTCTTCTAGA AAATGTGAGG TTTTACAAGG AGGAAGAAAA GAATGATCCT GAGCATGCAA AAAAGCTTGC CTCTCTAGCA
GATCTGTTTG TGAATGATGC ATTTGGTACT GCTCATAGGG CACATGCATC AACAGAGGGG GTTACTAAAT ACTTGAAACC
ATCTGTTGCT GGTTTTCTTT TGCAAAAGGA ACTTGATTAC CTTGTTGGGG CAGTATCAAG CCCAAAAAGA CCATTTGCTG
CCATTGTTGG TGGTTCCAAG GTCTCATCTA AAATTGGAGT GATTGAGTCA CTTTTAGAAA AGGTTGATAT CCTTCTTCTT
GGTGGAGGAA TGATCTTCAC ATTTTACAAG GCACAAGGTC TTTCAGTGGG TTCTTCCCTT GTAGAGGAAG ATAAATTGGA
TCTTGCTACA TCACTACTTG CAAAAGCCAA GGAAAAGGGG GTGTCTCTCT TGTTACCAAG TGATGTGGTG ATTGCGGACA
AATTTGCTCC CGATGCAAAT AGCAAGGTCG TGCCAGCATC TGCCATCCCT GATGGCTGGA TGGGATTGGA TATTGGTCCA
GATTCTGTTA AATCATTCAG TGAAGCATTG GGTACAACCA AAACCATCAT ATGGAATGGA CCAATGGGAG TGTTTGAATT
TGACAAGTTT GCTGTTGGTA CAGAGGCTAT TGCCAAGAAG CTAGCTGACC TCAGTCAAAA TGGAGTCACC ACGATTATTG
GAGGAGGTGA TTCTGTTGCA GCTGTAGAGA AAGTTGGAGT TGCCAATGTC ATGAGCCACA TATCTACTGG TGGTGGTGCC
AGTTTGGAGT TATTGGAAGG CAAAGAGCTT CCTGGAGTCC TTGCTCTTGA TGAAGCCACA CCAGTCCCTG TGTAAGACAA
TTTTCAGCTT GGAAAATTTT CCCATCCTGA GTTGTCAGTC TTGTGAAAGA GCATGTGTTT TAGGACCGAT CCGAGTCTGT
TAGTGTAAAT TTAATCATGC TTGAGTTATT GACTTCACTC ATAAATTGCG TGTAACTGTA AACACTGGCT GAGAGCCATA
AATTCAAATA AATCCTTGAG TTGCTGCCAG AAGCATTTTG CACTTTGATT TGTCTTATGT CACACTCCTG ACTGGCGCCA
TTTGGTCCCG GGTACACTGT AACAAGTCTT AAACAACTAC GAGGATTATT GTAGGAACAG AAGATGAAAG GTATGGTGCA
AAATTTGCTG CCAGTGTAAT CTAATTTAAA TTCAAATAAA TCTATTGGTT GCTGCCAGAA GCTATTTACA CTTTGCTTTT
ATCTTATGTC TTCCTGCAAA ATCCTTGAAC ACGAACCAAG TTTTTGTCGG CATTGTATGC ATTTCTTTAT TTTATCTTCC
AGGGGCGAAA CTGTTTGCAC TCAATGACGT GACTGTCATC TGTCAAGAGA GATTGCAACC AATGATTCTT GTGAATTTAG
ACCTTTTAGC CAATGTTTAT TTCGGTTCAT TTGACGCTTA AGAGGATATG AGAAGATTAG AGAGGATTGG AATGGTTTGT
TTGAGTTGAT TTCCTAGAAG TGGCTAGGAA AGTTCTGGGA GCTCCACTAG TATTACTTTC AATGGGTTGT ACTTGGATTT
ATTTAATGAA AGATCAATTT AAACTTTTGA A

>Vigan.07G207300.01
ATGGCCTCAG CCGCAGCCCC CACCACTTTC TCTCTGCTCC ACTCCGCCAC CTCCACCTCG TCTTCCTCGC GCGTGAAGCT
CTCCTCCTCC CTCCGCGTCC GCCCGCTCAC GCGCCACCTG GGGTTCAGGG TGGCCGACCC GCTGCTGGCA GCGAATGTGG
CGGCGCGGGT GGCCGCGGTG AGGGTCGGGA GGGGCAGGAG AGGGGTGGTG TCGATGGCTA AGAAAAGCGT GGGCGACCTG
ACTACTGCGG ACTTGAAAGG AAAGAAGGTG TTCGTGAGGG CTGACCTCAA CGTCCCGCTC GACGACAACC AGAACATCAC
TGACGACACC AGAATCCGAG CCGCCATTCC CACCATCAAA TACCTCGTTG AAAACGGCGC CAAAGTCATC CTCTCTAGCC
ACTTGGGGCG ACCGAAGGGT GTCACTCCCA AATACAGCTT GGCTCCTCTT GTATCTCGGA TTTCTGAACT CCTTGGTTTC
CCGGTTGTCA AGGCTGAGGA TAGTATTGGT CCAGAAGTGG AAAAGTTGGT GGCTTCTCTT CCAGAAGGAG GTGTTCTTCT
TCTAGAAAAT GTGAGGTTTT ACAAGGAGGA AGAAAAGAAT GATCCTGAGC ATGCAAAAAA GCTTGCCTCT CTAGCAGATC
TGTTTGTGAA TGATGCATTT GGTACTGCTC ATAGGGCACA TGCATCAACA GAGGGGGTTA CTAAATACTT GAAACCATCT
GTTGCTGGTT TTCTTTTGCA AAAGGAACTT GATTACCTTG TTGGGGCAGT ATCAAGCCCA AAAAGACCAT TTGCTGCCAT
TGTTGGTGGT TCCAAGGTCT CATCTAAAAT TGGAGTGATT GAGTCACTTT TAGAAAAGGT TGATATCCTT CTTCTTGGTG
GAGGAATGAT CTTCACATTT TACAAGGCAC AAGGTCTTTC AGTGGGTTCT TCCCTTGTAG AGGAAGATAA ATTGGATCTT
GCTACATCAC TACTTGCAAA AGCCAAGGAA AAGGGGGTGT CTCTCTTGTT ACCAAGTGAT GTGGTGATTG CGGACAAATT
TGCTCCCGAT GCAAATAGCA AGGTCGTGCC AGCATCTGCC ATCCCTGATG GCTGGATGGG ATTGGATATT GGTCCAGATT
CTGTTAAATC ATTCAGTGAA GCATTGGGTA CAACCAAAAC CATCATATGG AATGGACCAA TGGGAGTGTT TGAATTTGAC
AAGTTTGCTG TTGGTACAGA GGCTATTGCC AAGAAGCTAG CTGACCTCAG TCAAAATGGA GTCACCACGA TTATTGGAGG
AGGTGATTCT GTTGCAGCTG TAGAGAAAGT TGGAGTTGCC AATGTCATGA GCCACATATC TACTGGTGGT GGTGCCAGTT
TGGAGTTATT GGAAGGCAAA GAGCTTCCTG GAGTCCTTGC TCTTGATGAA GCCACACCAG TCCCTGTGTA A

>Vigan.07G207300.01
MASAAAPTTF SLLHSATSTS SSSRVKLSSS LRVRPLTRHL GFRVADPLLA ANVAARVAAV RVGRGRRGVV SMAKKSVGDL
TTADLKGKKV FVRADLNVPL DDNQNITDDT RIRAAIPTIK YLVENGAKVI LSSHLGRPKG VTPKYSLAPL VSRISELLGF
PVVKAEDSIG PEVEKLVASL PEGGVLLLEN VRFYKEEEKN DPEHAKKLAS LADLFVNDAF GTAHRAHAST EGVTKYLKPS
VAGFLLQKEL DYLVGAVSSP KRPFAAIVGG SKVSSKIGVI ESLLEKVDIL LLGGGMIFTF YKAQGLSVGS SLVEEDKLDL
ATSLLAKAKE KGVSLLLPSD VVIADKFAPD ANSKVVPASA IPDGWMGLDI GPDSVKSFSE ALGTTKTIIW NGPMGVFEFD
KFAVGTEAIA KKLADLSQNG VTTIIGGGDS VAAVEKVGVA NVMSHISTGG GASLELLEGK ELPGVLALDE ATPVPV*