GBrowse Details

Vigan.07G198400.01

Basic Information:
Name: Vigan.07G198400.01
Multiple alignment
Variant Information
Position: Chr07:27342698..27348598 (- strand)
Length: 5901
Functional Information:
Description: Similar to Uncharacterized protein. [I1MJH3, Glycine max]
InterPro: Calycin-like (IPR011038)
Domain of unknown function DUF1794 (IPR014878)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.86,7.47,9.62,11.04,10.12,12.91,5.01,6.45
Arabidopsis thaliana homolog: AT1G79260.1
Automatic updates:
Name: NM_001249150 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306509 (LOC100306509), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:27342698..27343313 (- strand)
Length: 616
Type: three_prime_UTR
Position: Chr07:27343314..27343433 (- strand)
Length: 120
Type: CDS
Position: Chr07:27346862..27346930 (- strand)
Length: 69
Type: CDS
Position: Chr07:27347607..27347747 (- strand)
Length: 141
Type: CDS
Position: Chr07:27348262..27348438 (- strand)
Length: 177
Type: CDS
Position: Chr07:27348439..27348598 (- strand)
Length: 160
Type: five_prime_UTR

>Vigan.07G198400.01 class=Sequence position=Chr07:27342698..27348598 (- strand)
TTTTTAGAAA GTCACCAGCT TTTGGACGTC TAGCTATCAT CACCTTCGTA AACACAGAAC AAAGTAACAC ACAAGTTAAG
TTACAGCAAT AAATCCAAAT ACCCATTTTG GATTCTACAA TAATTGGGTT CACATAAACA TTTTCCAAAG AAAAACAGAG
ATGGATGCTG AAAAGAATTC TCCGACGCCG GTAACATCAC CGCCTGTGAT ACACCCCGCG GTGGCACCGC TCTCCTTCCT
TCTGGGCACT TGGAGGGGCC AAGGAGAAGG AGGCTTCCCC ACTATACATT CCTTCTCCTA TGGCGAAGAG CTTTTCTTCT
CCCATTCCCC CAACAAGGTT TTCCTGTCTC TTTCTCCATA AACACTATCT GGGTCCCTTG AAGTTCTCTT TTTATTTACT
GGGTTGTTTT TGTTTTTTTA AGAATTTTAT TTTAATACAC CATTAGCTTA CATGGTCAAT CAATTCAAAA GTAAATCAAC
TAGTACGATG TTGTTTCAGT TTATCCAGTA GTACTAGTTC AGATCCGGAA TATGCTAAGG AACAATTTCG CCCTTTATAT
GTGACTAGTA AGATTGTTTA TGGTAAAATA CAATTCTCAC TCAGGCAAAG AAAATTAAAG GATTATCCGA AACATGATGT
TTAAAGTACA GAAAAGTAAA TGACTTCTAA TTATATGGCA ATGAACTATT AAATTTACAT TATTTGTGTT TTTCGATTAC
ATTCTTCTTT TAACCATTTA TGATGATATA TGCTGAGGAC TTCAGTTTAA TTCATCTTGT TTCTCTTCTT TTGTGGGTGG
TTGTGAACTG ATTCTGTTTA TTTGGTTTGG TTGTGTGTGA AATGGGTATA GCCTGTGATA GGGTACACTC AGAAGACATG
GAAACTCAGC TCTGGAGAGC CTATGCACGG TGAGAGTGGA TACTGGCGTC CTAAACCTGA TGGCACCATG GAAGTTGTGA
TTGCTCAAAG CAATGGTCTT GTGGAAGTTC AGGTACTATT TTTCAATTTG ATTTGGTTTT TATTACGGAT ACACTGTTTG
ACCAATTGGC TTCATACTTG TGTCTGTATA ATCCGTATGC TATAGGAATG GTGTGGGTTT AGAAGCTCCA TGGACTCTTA
ATATGCATAA CTCCTCAGTT TAAATTTTGA GACAACTCTA TTTGAATATG AAATTTTGGG AATTGATTTA ATTTTGATGA
GTAATACCCT TTGGATCAAC CTAAATCCTT GACTTTTTTT GTTACTTGTC AAACAACAAG CACGTGTTTA TTATTTTGTA
CTTTGCTCCA ATTATTCTGT ATTTTGCTCC AAATAAACTC TATGGCAAAA CAGTCCACTT CTGCTACGTT TTGAGTCCCA
ATTTTCCTAA CATTGCATTC AATCCATTAT ACCCAGTTGC TTGCAATAAA TTTCCCTCTA TATGCATTGA TGCATAAGTT
ATGCAATGCG TTATGTATAC ACTGTTTTTC TTGTCATGTT GATATATTCT TCCAAATATA TGTTTGATTT ATAGCTTTCT
TCCTTAATTT AACTGTTTAA ACATAAAGGT CTTGATCATT TCATTGCTTC TAGGTCCATG GGGTTAGTTA CTTTCTTGCC
TTTCATTTTT TATTCCCTTC TAGTTCCCTT CTCTGCTATT AAGGTGTCAT TTGACATTGT GCTTCCAGAA AGGGACATAC
AGCTTTGAAG AGAATGTGAT ACAACTTCAG AGTGAAATGG TGGGGAATGC TTCTAAGGTA ATCTAAATTA GTATTGCCAA
TGCAACAATA CTGATGTTGA TGTCTCATGC TTATGATTGC ATTGTTCACA TACATTACAC TCTGACAATG ATTGGATTGT
TTCTTATATG TTACATTTAA AAAACAACCT TCTTAGTGAG GCATCTTCTG ATAATATGAA TGTGTCAAAA AAGTTGTATT
GTAAATGTTT CTTAAGAAAT TTTTTTATAA TCATCTGTGA GGATTATGGT TTTTATGTGA TGAACAAGGA TTGACTTATA
ATATGGAAGC ACTAGAAATT TATGAGGATG AATAAAGTTT AGATTCATGT TGTAGAATTC GTGTTGGAGA TAAAAGAAAT
CTTTAAGAGG ATGGATAATG GTGAAGAAAA ATGCCTACAT ATAGTTTTTA TTGACTTGGA AAAAGCTTGG AATCGAGTAT
CAAATGAAGC TATGTGGAAG CCTTTGGAAA AGTAGTCCAT GACTAAAACA TGTGATTGGA TAATTATTAG TGAGAAAACT
TGGTGGTGAG GCTAAAGTCT TTTCTATAAG AATTGGATTA CATCATGGCT CAATTTCAAG TCCTAACATG GTTAATCTAA
TCTTGGATGT GGTTACCAGG GTCAACATAA GACTGTCCTT AATTACATAC TTGTTTTGGA TGATATAGTG TGGATTGAGG
AATCAAAAGA AGATGTGAGC TCTAAACTTA AGCTTTGGAG ACAAACTTTG AAAGCAAAGG ACTTTTATTT GTGTAGGAAC
AAGACACAGT ATATGCATTG CAATTTTAGC TAGAAATAAG AGAAAACAGT TATAAGTAAA AAAGCAATAA GATGTTATGA
CACGTGTTTC TAAGTTTAAT ACCCAGAATT AATTAATATT ACAAATAATG GAGGACTTAA TAAAGATGTA GCACACAATA
TAAGCTGGAT GGATAAAATG GAGAAAGGCA ACAGGGATCT ATTTCATATC TCAAGTATAA CAAACTCATG AAAGCTTTAT
TGCATTCTTG TCTATACAAC TATACATTAT GGTATTGAAT ATTAAGCTGG ATGTGTGGTC ACACAAAAAT TGATAGAATA
CAAACTAATT GTGAACTAGA AGAAATTTGT GACATTTACT TGGGAAAAAT AATAGAAAAT TGATTTTGTT GGTTTGAACA
CGTGAAAAGA AAGTCAATGG AAGCATTAAC GATGAGAATA GATTACATTT TTTCAGCTTT GCAAACAGAT AGAAAGGGAG
ATCAAGGACA TTGCAAATAA CTGTTTAGAC AGATTTTTAT GGTTAATAAT ATGCTTCAGA ATTTAATCTA GTTGAGCCTA
AAGGCGTATT GCAGTCCATA TAGTGAATCT CATCTAATGA GATAAAGACT TTTTGTTGTT GTGACAACAA TGATTAGTAA
ACAGAAATCT ACAGAAATAG AGGGAAGTCG GGTGAGGACT TCTGAACATT TGGTAGATGA AATCATTCAA TGTGCTTTTC
ATTTTACATG TATTTTAAAT AAATTGATGA ATCACTGACT AATAATAACC CCCATTGAAG TAATACCTCA TTTTGGTTGT
TACCTTTTGG CAAAAGATTT TTATGTAATG TTATCATGCA GATTGTTATC ATTGCTTCTT TATTCTCTCC TTAGATGGTA
TGTTATGTTT ACTGTAGGAA ATACTTTGTC ATACTTCACT CTATACCCCA ATGGTAAAAC AAATTAGATA ACTATGTTAG
ATTAAGGAAA CACCTTGCTA CCAACCTTAC TACGTTGATT AAAGAAGAAA GTTGGAATGT CTCATTTCTT TATGTGGTAT
TGCTACATGG TATGTGAAAG CTGAAAATGT ATGTTCTTCT AAGTAATGAC ATTGAATCTA CAAGAACCAC ATGCTTGATT
TTGTAGTCAT CTCTAATTAA TTTAATCTAA GGGATAAGTA ACTAAACTGA GTTTTCAGTT CAGAATAGAG AATTCAAGGA
GGAAATTTAG AATCAAAGCA AGAATGCAAT TTAATTTGGA TTAATTTAAT AGAAGAAAAC CTCGAGGGTC AAGTTTTACA
CCAAGACTTT TTATTGGCAT ACTTCTTTAT CTTCATAATC TTTTTACTCT CTTTAAAGAT GATTTAACCT AAGAATAACC
CCAGTTCTCG TAAGTGTTTT GTTTTTTAAT TGGTGCAATT TTGCACTATA TAATTATATA AATGTTTAAA ATTTACAAAC
ATGGGTGCAA GCACAATTTT AAAATGTAAT AGTTGTGCTT TCAAGCACGA ATTTTGGATC AATTTTTTTT ATTGATGCTG
TATTTCAAAA CAAAACTTCT CTCTTTATTT TAAATTGTGT TTCATAGCAA TAGTTGCTTC CTTTTTTTTT ATGTGAAAAT
AATTTTTTAA GGCATGGTTT TTATTTGTTA AAATCGTGCT TTATGGCATG ATTTTGGTTT TATTATTATT TTAAAGAATG
GTAATTGGAG GGCCCGAATA GGATTTGATT TTGAAAATAA ACTATAATAA AACAAAAGTT TAGCTTATTA CTTTGATATA
ATTGTTTGTA ATTGTATTTT TTAATGTTGT TTTATTTTCT TTTACTTTTG TTAGGTTATG TACTTTTTAT TTATTTGATA
GGGACCTTTT TATATTTTTA GATAATTTGG TTAATCAATT AATTTTAATC ATATTATTTA TTATTTGAAT GAAATTTGAG
CAAATAAAAA AATAGCAGTA AATTAAACTC TTGATCAAGT AAACCAAATT CAAATGAAAA TAAAATTTTA ACAATAACAT
TGTTAAGGAA AGGTAAACAA AAAATTTGTA AGCTGGTGCT ATAAGTTGAT CTTTCTATTT GTCTTCTAGG TCTTGGGGTT
GACTTATATT CGATACATTT GTAAGACAAC TTGTACACAA ATTTGTGGTT TCTACATTTG TCAAAAAAAA ATAAAATTGT
GCCATGTAGC ACGATTTGAA AATGCTTTGA AGCACGACTT CAATAGAAAA CACTGAATTT TAAATTTAAA AGATTTACCC
ATTTACGTAG CTACATGAAG CATTTTTTCA ATCTATTGAT TTCTCAAAGG ATTTAAGCCT ATTATGGTGA TTGAAGTCCT
ACGATTAAGA TCCCTTTCCA GTCATTCCTT TGCTGTTTAT GGTTATGAAA AATGATCGTT TAAAGCTTCT CATAGATAAA
ATCAATGGAA GATAGTTCAA GAGAAAATAA AAAAGAACAA AAGTTAAATA AATTAAAATC TAATAGCTCT CAAGGGCTTG
GGCCCACTTT TAGAATTAGA GAAAGTTACT CTCTTAATTA AAGAAAACAT AAAAGAAAAG TAATAGTAAA CAAAGATGTT
AATTCTAACT TAAAGAAATG AAAATATTCA AAATTCAAGC TCAAACAATG TATTATGCTA AATTCTAACT AAAACAAGAT
TTAATTGACA TCAGTGCCTA AAATACTTGA TACCACTCTA CCCAGGTTAA AGAGATAAGA AGAAGTTTTA AGGTGGTTGA
TGGGGTTCTT TGTTATGAGG TTCAGATGGC TACCAACACA GTAAGTCTTC AACCACACTT GAAAGCAACA CTGAAGAAGC
TCTGAAGCAG TCACCACCTC TTGAAGAAGA AGCAACACTT GGCATTGTGA CCTCACCAAA TCTTTTTTAA CAACAATTTA
GACTACCCTG GTAATTCTCT GTTAACTAGC AAAATCAGCT GTTCAAAACT CTTCTATACA AGCTTTGCAA GGCCTCAACT
TTGAACAATC TGACATGACT TAATTTTATT GGAAGCAGCT AAGCAGGAAA AATGAGCTTA TCCTAATGTA CATCATACTT
TATGCTTGAT TTTAATTTCT TTCTTTGAAG CTATTATGAT GCTTGAAATA ATAACTATAT TTTATACTCA AACTGAAACT
AGATTTCTTC TCTACCTTCT GCTGATTTTG ATGAACCAGC ATCAAAAGGA ATTGTACACT AAGTTAGACT TGTACAGGCT
TAGTGGGTAT TCGGACAGTG ATTGATGAGG AGATGTAGAT GACCAGAAGA GCATGACTCA TTATTATGTT TTCTTCATGA
GAAATACAAC ATTTAATTGG TTCTCAAAGA AATAACCCAT TGTAACACTA TCAATGTGTA AAGCTGAATA TATGGCAGCA
TCTTGAAGTA TCCGACATGC AATCTAGCTT ATAAACTTGC TACGGAATTT GTAAATAATG T

>Vigan.07G198400.01
TTTTTAGAAA GTCACCAGCT TTTGGACGTC TAGCTATCAT CACCTTCGTA AACACAGAAC AAAGTAACAC ACAAGTTAAG
TTACAGCAAT AAATCCAAAT ACCCATTTTG GATTCTACAA TAATTGGGTT CACATAAACA TTTTCCAAAG AAAAACAGAG
ATGGATGCTG AAAAGAATTC TCCGACGCCG GTAACATCAC CGCCTGTGAT ACACCCCGCG GTGGCACCGC TCTCCTTCCT
TCTGGGCACT TGGAGGGGCC AAGGAGAAGG AGGCTTCCCC ACTATACATT CCTTCTCCTA TGGCGAAGAG CTTTTCTTCT
CCCATTCCCC CAACAAGCCT GTGATAGGGT ACACTCAGAA GACATGGAAA CTCAGCTCTG GAGAGCCTAT GCACGGTGAG
AGTGGATACT GGCGTCCTAA ACCTGATGGC ACCATGGAAG TTGTGATTGC TCAAAGCAAT GGTCTTGTGG AAGTTCAGAA
AGGGACATAC AGCTTTGAAG AGAATGTGAT ACAACTTCAG AGTGAAATGG TGGGGAATGC TTCTAAGGTT AAAGAGATAA
GAAGAAGTTT TAAGGTGGTT GATGGGGTTC TTTGTTATGA GGTTCAGATG GCTACCAACA CAGTAAGTCT TCAACCACAC
TTGAAAGCAA CACTGAAGAA GCTCTGAAGC AGTCACCACC TCTTGAAGAA GAAGCAACAC TTGGCATTGT GACCTCACCA
AATCTTTTTT AACAACAATT TAGACTACCC TGGTAATTCT CTGTTAACTA GCAAAATCAG CTGTTCAAAA CTCTTCTATA
CAAGCTTTGC AAGGCCTCAA CTTTGAACAA TCTGACATGA CTTAATTTTA TTGGAAGCAG CTAAGCAGGA AAAATGAGCT
TATCCTAATG TACATCATAC TTTATGCTTG ATTTTAATTT CTTTCTTTGA AGCTATTATG ATGCTTGAAA TAATAACTAT
ATTTTATACT CAAACTGAAA CTAGATTTCT TCTCTACCTT CTGCTGATTT TGATGAACCA GCATCAAAAG GAATTGTACA
CTAAGTTAGA CTTGTACAGG CTTAGTGGGT ATTCGGACAG TGATTGATGA GGAGATGTAG ATGACCAGAA GAGCATGACT
CATTATTATG TTTTCTTCAT GAGAAATACA ACATTTAATT GGTTCTCAAA GAAATAACCC ATTGTAACAC TATCAATGTG
TAAAGCTGAA TATATGGCAG CATCTTGAAG TATCCGACAT GCAATCTAGC TTATAAACTT GCTACGGAAT TTGTAAATAA
TGT

>Vigan.07G198400.01
ATGGATGCTG AAAAGAATTC TCCGACGCCG GTAACATCAC CGCCTGTGAT ACACCCCGCG GTGGCACCGC TCTCCTTCCT
TCTGGGCACT TGGAGGGGCC AAGGAGAAGG AGGCTTCCCC ACTATACATT CCTTCTCCTA TGGCGAAGAG CTTTTCTTCT
CCCATTCCCC CAACAAGCCT GTGATAGGGT ACACTCAGAA GACATGGAAA CTCAGCTCTG GAGAGCCTAT GCACGGTGAG
AGTGGATACT GGCGTCCTAA ACCTGATGGC ACCATGGAAG TTGTGATTGC TCAAAGCAAT GGTCTTGTGG AAGTTCAGAA
AGGGACATAC AGCTTTGAAG AGAATGTGAT ACAACTTCAG AGTGAAATGG TGGGGAATGC TTCTAAGGTT AAAGAGATAA
GAAGAAGTTT TAAGGTGGTT GATGGGGTTC TTTGTTATGA GGTTCAGATG GCTACCAACA CAGTAAGTCT TCAACCACAC
TTGAAAGCAA CACTGAAGAA GCTCTGA

>Vigan.07G198400.01
MDAEKNSPTP VTSPPVIHPA VAPLSFLLGT WRGQGEGGFP TIHSFSYGEE LFFSHSPNKP VIGYTQKTWK LSSGEPMHGE
SGYWRPKPDG TMEVVIAQSN GLVEVQKGTY SFEENVIQLQ SEMVGNASKV KEIRRSFKVV DGVLCYEVQM ATNTVSLQPH
LKATLKKL*