GBrowse Details

Vigan.07G190600.01

Basic Information:
Name: Vigan.07G190600.01
Multiple alignment
Variant Information
Position: Chr07:26366901..26369089 (- strand)
Length: 2189
Functional Information:
Description: Similar to Uncharacterized protein. [I1KTJ7, Glycine max]
InterPro: Protein of unknown function DUF953, thioredoxin-like (IPR010357)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.00,0.00,0.13,0.00,0.00,2.30,0.13
Arabidopsis thaliana homolog: AT5G42850.1
Automatic updates:
Name: NM_001252715 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max thioredoxin-like protein Clot-like (LOC100785157), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:26366901..26367637 (- strand)
Length: 737
Type: three_prime_UTR
Position: Chr07:26367638..26367888 (- strand)
Length: 251
Type: CDS
Position: Chr07:26368887..26369031 (- strand)
Length: 145
Type: CDS
Position: Chr07:26369032..26369089 (- strand)
Length: 58
Type: five_prime_UTR

>Vigan.07G190600.01 class=Sequence position=Chr07:26366901..26369089 (- strand)
TGTGTTGGAA AATAATCTGA CAACTTTTTG GAGTTGTTTT GTTTGCAGAG AAGAAAAAAT GCCGTTGAAG TTGTTGGAGG
CAACAGTGTC GAGTTTTGAT GGTGTTTTTG AGAAGTTCCG ATCAGAGGCT GCAGAAAACA AGGCGAATCT CATCCTTTTC
TTGGCTGACA AAGACCCTGC TACCTCTCTC AGCTGGTGCC CTGGTATCTA TATACCTATC ATGCTATCCA TGCATGCTCT
TTTTCTTCTT TCTCTTGCAT GTTCAAATCT GATTCTTTTT ACTCCAAAAC TTATGATTTA ATAGCTACTT CAGCTTCTGA
ATTTGATGAC TGGATGCACT AAATGCATTT TATTTCATGG AGCGTTTGAA AATATCAATG GAAATTCTTT GCCAATATAG
CACAAAACAT GTTGTAAAAT ATTAATATTA TTGCAAAAGA AACGTTTGTT TTTGAACGTT GGCAGAGAGT TCGGTTTCTC
ATTTTGCCAC ATGCAAACAT TACTTTATTT CTCTTTTGGC AACGTTCCAT TCCTTTTGCA ACGGTGCAAA ATCCACTTTT
GGTTGGCAAC GTTCATTTGG CTTTCCAACG GCATTATATA TTTGTTCTAT AAATAGAACA ACCATTTTCA TTCATAATAA
TCATCATAAA AATTCTCTTC TCTCATTCTC TCATTCTTTC TCTCAATTTT CCTCTCCAAA ACTATCCTGA GTATAAACTA
GAGAGTTTCT TGCTAGTTCT GTGATCCTCG AATATTATTC GAGAAGTTCA TGTTGTATCC TGGGGGACTT GCGCATACAC
CGCGGATAAG TCCTTAAGGA CAGTGAATCT ACACGCCTCA GGAAATAGCG GTTCAAGTTT TTGTCAGCAC AATTTACTAC
AAAACATTGG CTTGGATTTC ATTGGAGAAA GAATCTTTTC TGTCAATATT GCAGAAAACT TATAAGATAT TGGTTAACTA
GTGAGAAGAG CTTCTGATAG ATTGTTGTTC TGTATGTAGA ATGATATTTG TACCTATTAG CATATCTCTG GATAACTTAG
ATCTCTAACT TTGATGACGC TTAGTGTAAA TTACCAATTA AAGTATTATA TTAGACAAGA AAAAGGATTA AGAATGATGT
TGATTACAAT TTTTTTATCA TATTGTTAGA GAAGCATGAC TAGTTTAATC AGAACTGTGA TGTACACCTT TTCCTTCTTA
GATTGTGTGA GAGCAGAACC TGTGATCTAC AAGAAGCTGG AGGCGTCATC TGATGACATT GCACTTTTGA GAGCTTATGT
TGGAGATAGA CCAACATGGA GGAACCCCAA GCATCCATGG AGAGTGGAAC CTAGGTTCAA GCTCACTGGG GTGCCAACAT
TGATCCGTTG GGACAATGAC ACGGTCAAAG GTCGCCTAGA AGATCACGAA GCTCATCTAG AAAACAAAAT TGAAACTCTT
GTTGAAAAGT GACAAACGAT TCACGGTGCA TGGTTTTAGT TGGTACTGCA TATAGTTTAA ACAATGTGTG ATGTACTCAT
ATCAGCAATT TATCCCTCTC ATACTTTATA AACTTGCTGC TAAAGCATAT AATAAAAGGT GATAAGGGAT GGCTATAAAC
GAGGGTAGGT TCTTTTAGCT TATTTTGTGG CTTTGAGCAC TACAAATTTA CTGGTTAGTC CAAGGTAATG TTACCTATAG
TGTTTTTGCA GACTGAAAAT GCCAGTTAAA CGAATTTTGA TTCAGAATTC ATACAGTTCG TAGTTCATAA CGCATAATTG
AGTGAAGTCC GTATGTTAGA GAGACAACCG ATACATAAAT CTGCCTTTTC TTACTTTGTA CAGAGGACCT AAATATCACT
GTTTGACTGT TATACCGCTC TTTCTGTTTC AGCCTTCATT CATAATTAAC ATATATTACA TGTCAAGGTA TAAGAATCCT
CACTTTTGTA AAAAGCCTGA AAAGCCTAAT TTTAAATGCC ATGCTTGTTG ACAAAAATTC AGACCAAATT ACAAGGTGGA
CAATTTCAAT CCTAAATTAC AAGGTGGGCA AAATTAAATA AAAATAAGTT AATGATTGCA GTTTAATATA AACTAACCAG
ATACAGATAT ACATAGTGAC AAAAATCATC TCCTCAAGCT GGCCATTTCG CCTTATGTCT GCTATTATAC ATAACCGACT
GCGTTTCCAT TCTAGGCAAG AAATCCAAC

>Vigan.07G190600.01
TGTGTTGGAA AATAATCTGA CAACTTTTTG GAGTTGTTTT GTTTGCAGAG AAGAAAAAAT GCCGTTGAAG TTGTTGGAGG
CAACAGTGTC GAGTTTTGAT GGTGTTTTTG AGAAGTTCCG ATCAGAGGCT GCAGAAAACA AGGCGAATCT CATCCTTTTC
TTGGCTGACA AAGACCCTGC TACCTCTCTC AGCTGGTGCC CTGATTGTGT GAGAGCAGAA CCTGTGATCT ACAAGAAGCT
GGAGGCGTCA TCTGATGACA TTGCACTTTT GAGAGCTTAT GTTGGAGATA GACCAACATG GAGGAACCCC AAGCATCCAT
GGAGAGTGGA ACCTAGGTTC AAGCTCACTG GGGTGCCAAC ATTGATCCGT TGGGACAATG ACACGGTCAA AGGTCGCCTA
GAAGATCACG AAGCTCATCT AGAAAACAAA ATTGAAACTC TTGTTGAAAA GTGACAAACG ATTCACGGTG CATGGTTTTA
GTTGGTACTG CATATAGTTT AAACAATGTG TGATGTACTC ATATCAGCAA TTTATCCCTC TCATACTTTA TAAACTTGCT
GCTAAAGCAT ATAATAAAAG GTGATAAGGG ATGGCTATAA ACGAGGGTAG GTTCTTTTAG CTTATTTTGT GGCTTTGAGC
ACTACAAATT TACTGGTTAG TCCAAGGTAA TGTTACCTAT AGTGTTTTTG CAGACTGAAA ATGCCAGTTA AACGAATTTT
GATTCAGAAT TCATACAGTT CGTAGTTCAT AACGCATAAT TGAGTGAAGT CCGTATGTTA GAGAGACAAC CGATACATAA
ATCTGCCTTT TCTTACTTTG TACAGAGGAC CTAAATATCA CTGTTTGACT GTTATACCGC TCTTTCTGTT TCAGCCTTCA
TTCATAATTA ACATATATTA CATGTCAAGG TATAAGAATC CTCACTTTTG TAAAAAGCCT GAAAAGCCTA ATTTTAAATG
CCATGCTTGT TGACAAAAAT TCAGACCAAA TTACAAGGTG GACAATTTCA ATCCTAAATT ACAAGGTGGG CAAAATTAAA
TAAAAATAAG TTAATGATTG CAGTTTAATA TAAACTAACC AGATACAGAT ATACATAGTG ACAAAAATCA TCTCCTCAAG
CTGGCCATTT CGCCTTATGT CTGCTATTAT ACATAACCGA CTGCGTTTCC ATTCTAGGCA AGAAATCCAA C

>Vigan.07G190600.01
ATGCCGTTGA AGTTGTTGGA GGCAACAGTG TCGAGTTTTG ATGGTGTTTT TGAGAAGTTC CGATCAGAGG CTGCAGAAAA
CAAGGCGAAT CTCATCCTTT TCTTGGCTGA CAAAGACCCT GCTACCTCTC TCAGCTGGTG CCCTGATTGT GTGAGAGCAG
AACCTGTGAT CTACAAGAAG CTGGAGGCGT CATCTGATGA CATTGCACTT TTGAGAGCTT ATGTTGGAGA TAGACCAACA
TGGAGGAACC CCAAGCATCC ATGGAGAGTG GAACCTAGGT TCAAGCTCAC TGGGGTGCCA ACATTGATCC GTTGGGACAA
TGACACGGTC AAAGGTCGCC TAGAAGATCA CGAAGCTCAT CTAGAAAACA AAATTGAAAC TCTTGTTGAA AAGTGA

>Vigan.07G190600.01
MPLKLLEATV SSFDGVFEKF RSEAAENKAN LILFLADKDP ATSLSWCPDC VRAEPVIYKK LEASSDDIAL LRAYVGDRPT
WRNPKHPWRV EPRFKLTGVP TLIRWDNDTV KGRLEDHEAH LENKIETLVE K*