GBrowse Details

Vigan.07G186200.01

Basic Information:
Name: Vigan.07G186200.01
Multiple alignment
Variant Information
Position: Chr07:25701104..25704681 (- strand)
Length: 3578
Functional Information:
Description: Similar to uncharacterized protein. [C6T802, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:8.37,4.31,15.60,17.09,10.14,9.91,12.20,12.27
Arabidopsis thaliana homolog: AT1G33990.1, AT4G09900.1
Automatic updates:
Name: NM_001289331 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative methylesterase 12, chloroplastic-like (LOC100784567), mRNA; nuclear gene for chloroplast product.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:25701104..25701389 (- strand)
Length: 286
Type: three_prime_UTR
Position: Chr07:25701390..25701662 (- strand)
Length: 273
Type: CDS
Position: Chr07:25702416..25702550 (- strand)
Length: 135
Type: CDS
Position: Chr07:25702871..25703014 (- strand)
Length: 144
Type: CDS
Position: Chr07:25703106..25703345 (- strand)
Length: 240
Type: CDS
Position: Chr07:25704150..25704386 (- strand)
Length: 237
Type: CDS
Position: Chr07:25704387..25704681 (- strand)
Length: 295
Type: five_prime_UTR

>Vigan.07G186200.01 class=Sequence position=Chr07:25701104..25704681 (- strand)
AAAGGAATAG AAAGAGAAAT GAAACATGAA TTGAAAGTCT GGAGTCGTTG AAATCCAACG CAATTAATAA GCTCTAAAAT
CAGTTGGTTC CTTCCTTAGC ATATTTTTCC TTTTATATTT TTTGGCATTC ATACCCAACA ACTTAACAAC TCCTCCAACC
CTCCCTCACC ACGGAAAATA AAACAAAAAG ACAAGAGATA GCGATAAAGG GAGAAAATCA GGGACCATAG TAGGCAGAAA
AGAGGAAAAA CTTCGACTTT CTTTGTTTTC TGAAGAGCGG TGAAGAAAGT GAAAGATGGG TAACAGTTTT ATTTGCATGA
CTAAGAAGGA TTCGAAAGAT GTTGGATCGA GAAGCAAGAG AATGGGTAGA TCACAGAGGA AGCTTGTGAA CGAGGAAGAG
CTGCATCTTC AGGCACTGTC TATGGCACTT CAGCAGCATC AGTTGTCTCA GAGGTTTGAA GGGTCTATGT CTCGGAGAAT
TGGCTCCTCT AGAAGGCATG CTGTGTCTGA ATCTTTTTCA GCCAACAAGC AGGTGTGTGC CTGTTTTGTT TATTTAATTA
TTTATTATAT TATATTTACC ATGAATTGTG GATTTTGATT GAAAAGTTTT GATTTTTGAA TCATTTCTTC ACTGCCCAAA
AGTAGCTTGT CATGATTAAG ATCTTTGTGT ATGTGGGATG GGTAGAAGTG AAAACTAGTG TTTGTGATCA GTGGCCGCAT
GTTGACTCAA CATATCAAGC CAGGGCTGAA AAGTGCACAT ACATAAAGAA ATCAAAAGGG CTACTTTTTT CGATTTTTAT
TTTTTTTAGG TAAAAAAGGG GGTTGTTCTT TTGTGCCTCA AAAGGTGCAT CTAGAAAAGT ACATGGCCAT TTCACTGTGC
TTTCAAAAGA AGATGCGATT TGTTTATGAT TAGTTGCCTG CATCCTGTAC TGGTTAACAT ACCCCACTTT CCTTGATTCC
GCTATATACT TGTGCATTTT GACCCTAGCT GTTCTGAAGC TTCATGGGAA AATGCTTTTC TTCTAGCCTT TTAGGACAGT
CTAGCACAAT TGTCTAAGGA AAAAACTGGG GATGTTGTTT CATGTTTGCA GATAGATTGT TTTGTGAACT AGAATGGAAA
GGAAATGTGT AATCAGTACT TACGCTCTTC ACAACCTTGT TTTTGCCAAG AAAATTTGTT AGGAAGCGTT GTTGGTGGTC
AGACATTAGC TATAATAGCC TATAGGCTAT GACAATGCTA TCTCTTTTTT GATTGTTCAT GTTAAAAAGT TGAAATATGT
TTGCCCCTGT ATTTTGTATG AAATATTTAC CTGACTTGCT AGTGTATCCT GTGCAGGTTC CAATAAATCT GGAGAACATT
AAAATAAAAA AGTTTGTACT AATCCATGGA GAAGGTTTTG GGGCATGGTG CTGGTACAAG ACTGTTGCCT CTCTAGAAGA
AGCAGGGCTG CTCCCAGTTG CCTTAGATCT TACTGGCTCT GGAATTGATC TCACAGACAC TAACAGTGTC ACTACATTGG
CTGATTATTC AAAACCTTTG ACTGTTTATC TCGAAAACCT TCCTGAGGAT GAAAAGGTTT GGCTGTGTGA CATTCAACAT
TCTTTTAACT TGAAGCATGC TATTATACAA CATTCTTTTA TATTTCATGA AGATGGAAAC TTTGCAGGTT ATTCTTGTTG
GTCATAGTAT TGGTGGTGCA TGCATTTCTT ATGCGTTGGA GCATTATCCT CAGAAGATCT CAAAGGCAAT TTTCCTTTGT
GCTACAATGG TATCTGATGG TCAAAAACCT TTTGATGTCT ATGCTGAAGA GGTATCTAGT TAGCTTCTTT TTGTTGACTT
ATGTGATCAG TTGAATTTTT GAGAGTGGTG AAATACAATC CAACCTAAAT TATTCACCAA AGCTTCCCAA GTTTGGAACA
TTTCTTACCA ATTATGTTAT ATGTGGGACA TGTATTGCAC TTCATCCTTT CCTAAACCTC TAATATGCTA GTTCTGGAGG
AAAAAATTAT TTATTTTGTA TTTTCATCCT TGAGTGAACA TGTTTTATAT AATTAATTAT TTCTGTTATT CTGATTCCAT
CACATTTTAG TTTTATTTTG GAATAGTTCT CACCAATTAT CTGCACTGCA GCTGGGATCT GCTGAACGTT TTATTCAAGA
ATCAAAGTTT TTGATACATG GGAATGGTAA AGACAAACCC CCGACAGGAT TTATGTTTGA GAAGGAGCAG ATGAAAGGGT
TATATTTTAA CCAATCCCCA GCAAAGGTAC ACAGGATTGA AGACTATTTC TAACTTCTTT TCCTCCAAAT TTTTTTAACT
GCTATATTCT GACTGCCATT CAAATTAGAT ACTTGAAGTT GTATGATTTG TGCCCATATA CCTTCAATGA TGATCATACC
TTTTATCTTC ACTGTTTACT CGACATTCCA AGCTTCATGC TTGTAGAAGA TTTAAATTGA GTACAATTGA GTAGCTGAAT
GACCATCCCC ATTAGTGCAA TAAGGCAAAC ACAAATTTGT TCTCCAACCT ATAGTGGAGC TGAAAGGCAA TTTTGTAATT
GTTGCTGATC TATGAGCTCT GAGTGAGGTA GATAACGCCC TCAGAACTCA AAATTAGCTT GCTGGTGTTT AAGTTGAAGA
AGTAAACCCC TTCCTCAAAA CGCTCATGCG TTGTAGTTGT GTTATCCCCT TTCCAAATGC TTTGGGACAG AGTTATGATT
TCATAAAGAC AGGTCTTTAT GGACAAATAT TCGAAAACGA TTTCTTAAAC TTGTGTTTTT TATTTTGAAA GTTGTTTAAT
TGCCCCAGAA AAGGAAAGAA TTTCTTAAAG CAGATAACAC TAAGCAGAAA GTAGTCAAGT GAATCCTTGA AAGCTTGTGT
CAAGGGATTG TGGTCAAATT AGGATTGTTA TTGATTCTGA TTTTTTCACA CAAGTAACCA GAATGATAGC TTGAGCATTT
GTGGTTGTTG CATTAACACT TTAAAGTTCT GATGATATTT GGAATGAGTT GTATTTCAGG ATGTTGCTTT AGCCATGGTT
TCCATGAGGC ACAGCCCTCT TGGTCCAATC ATGGAGAAGC TGTCTTTATC TACTGACAAA TATGGCAGCG GGCGCCGGTT
TTACATTCAA ACATTGGATG ATCGTGCACT TTCACCAGAT GTCCAAGAGA AGCTTGTGAG GGAAAATCCA CCTGAAGGAG
TTTTCAAGAT CAAAGGCAGT GATCACTGTC CATTCTTCTC CAAGCCGCAA TCTCTACACA AAATTTTGGT GGAAATAGCT
CAAATTCCAT AGCTTAATGC ACAACATAAT TTGTTCTATC ATTTCATCTC TTAGGACCAC ACAATTGTAG AGTTGATATT
GCTTTTTCTA TATTGACCGT GAAACAGGAA GCCCAATTGG GAGAAGTATT TTTATTTTTT ATAATCTTCA AATATAACAG
AGGAAGAAAC GTGATTTCAT CCCATTTAAG ACAAAATATT ATTCAATCAG TAAGTGACCT CTGTAAGTTT TCTTTTTCAT
GTGTATAGAA ATATTTTCTA GTTCTCATTC TGCTTTGACA ACTAATTTTC ATTGCGAG

>Vigan.07G186200.01
AAAGGAATAG AAAGAGAAAT GAAACATGAA TTGAAAGTCT GGAGTCGTTG AAATCCAACG CAATTAATAA GCTCTAAAAT
CAGTTGGTTC CTTCCTTAGC ATATTTTTCC TTTTATATTT TTTGGCATTC ATACCCAACA ACTTAACAAC TCCTCCAACC
CTCCCTCACC ACGGAAAATA AAACAAAAAG ACAAGAGATA GCGATAAAGG GAGAAAATCA GGGACCATAG TAGGCAGAAA
AGAGGAAAAA CTTCGACTTT CTTTGTTTTC TGAAGAGCGG TGAAGAAAGT GAAAGATGGG TAACAGTTTT ATTTGCATGA
CTAAGAAGGA TTCGAAAGAT GTTGGATCGA GAAGCAAGAG AATGGGTAGA TCACAGAGGA AGCTTGTGAA CGAGGAAGAG
CTGCATCTTC AGGCACTGTC TATGGCACTT CAGCAGCATC AGTTGTCTCA GAGGTTTGAA GGGTCTATGT CTCGGAGAAT
TGGCTCCTCT AGAAGGCATG CTGTGTCTGA ATCTTTTTCA GCCAACAAGC AGGTTCCAAT AAATCTGGAG AACATTAAAA
TAAAAAAGTT TGTACTAATC CATGGAGAAG GTTTTGGGGC ATGGTGCTGG TACAAGACTG TTGCCTCTCT AGAAGAAGCA
GGGCTGCTCC CAGTTGCCTT AGATCTTACT GGCTCTGGAA TTGATCTCAC AGACACTAAC AGTGTCACTA CATTGGCTGA
TTATTCAAAA CCTTTGACTG TTTATCTCGA AAACCTTCCT GAGGATGAAA AGGTTATTCT TGTTGGTCAT AGTATTGGTG
GTGCATGCAT TTCTTATGCG TTGGAGCATT ATCCTCAGAA GATCTCAAAG GCAATTTTCC TTTGTGCTAC AATGGTATCT
GATGGTCAAA AACCTTTTGA TGTCTATGCT GAAGAGCTGG GATCTGCTGA ACGTTTTATT CAAGAATCAA AGTTTTTGAT
ACATGGGAAT GGTAAAGACA AACCCCCGAC AGGATTTATG TTTGAGAAGG AGCAGATGAA AGGGTTATAT TTTAACCAAT
CCCCAGCAAA GGATGTTGCT TTAGCCATGG TTTCCATGAG GCACAGCCCT CTTGGTCCAA TCATGGAGAA GCTGTCTTTA
TCTACTGACA AATATGGCAG CGGGCGCCGG TTTTACATTC AAACATTGGA TGATCGTGCA CTTTCACCAG ATGTCCAAGA
GAAGCTTGTG AGGGAAAATC CACCTGAAGG AGTTTTCAAG ATCAAAGGCA GTGATCACTG TCCATTCTTC TCCAAGCCGC
AATCTCTACA CAAAATTTTG GTGGAAATAG CTCAAATTCC ATAGCTTAAT GCACAACATA ATTTGTTCTA TCATTTCATC
TCTTAGGACC ACACAATTGT AGAGTTGATA TTGCTTTTTC TATATTGACC GTGAAACAGG AAGCCCAATT GGGAGAAGTA
TTTTTATTTT TTATAATCTT CAAATATAAC AGAGGAAGAA ACGTGATTTC ATCCCATTTA AGACAAAATA TTATTCAATC
AGTAAGTGAC CTCTGTAAGT TTTCTTTTTC ATGTGTATAG AAATATTTTC TAGTTCTCAT TCTGCTTTGA CAACTAATTT
TCATTGCGAG 

>Vigan.07G186200.01
ATGGGTAACA GTTTTATTTG CATGACTAAG AAGGATTCGA AAGATGTTGG ATCGAGAAGC AAGAGAATGG GTAGATCACA
GAGGAAGCTT GTGAACGAGG AAGAGCTGCA TCTTCAGGCA CTGTCTATGG CACTTCAGCA GCATCAGTTG TCTCAGAGGT
TTGAAGGGTC TATGTCTCGG AGAATTGGCT CCTCTAGAAG GCATGCTGTG TCTGAATCTT TTTCAGCCAA CAAGCAGGTT
CCAATAAATC TGGAGAACAT TAAAATAAAA AAGTTTGTAC TAATCCATGG AGAAGGTTTT GGGGCATGGT GCTGGTACAA
GACTGTTGCC TCTCTAGAAG AAGCAGGGCT GCTCCCAGTT GCCTTAGATC TTACTGGCTC TGGAATTGAT CTCACAGACA
CTAACAGTGT CACTACATTG GCTGATTATT CAAAACCTTT GACTGTTTAT CTCGAAAACC TTCCTGAGGA TGAAAAGGTT
ATTCTTGTTG GTCATAGTAT TGGTGGTGCA TGCATTTCTT ATGCGTTGGA GCATTATCCT CAGAAGATCT CAAAGGCAAT
TTTCCTTTGT GCTACAATGG TATCTGATGG TCAAAAACCT TTTGATGTCT ATGCTGAAGA GCTGGGATCT GCTGAACGTT
TTATTCAAGA ATCAAAGTTT TTGATACATG GGAATGGTAA AGACAAACCC CCGACAGGAT TTATGTTTGA GAAGGAGCAG
ATGAAAGGGT TATATTTTAA CCAATCCCCA GCAAAGGATG TTGCTTTAGC CATGGTTTCC ATGAGGCACA GCCCTCTTGG
TCCAATCATG GAGAAGCTGT CTTTATCTAC TGACAAATAT GGCAGCGGGC GCCGGTTTTA CATTCAAACA TTGGATGATC
GTGCACTTTC ACCAGATGTC CAAGAGAAGC TTGTGAGGGA AAATCCACCT GAAGGAGTTT TCAAGATCAA AGGCAGTGAT
CACTGTCCAT TCTTCTCCAA GCCGCAATCT CTACACAAAA TTTTGGTGGA AATAGCTCAA ATTCCATAG

>Vigan.07G186200.01
MGNSFICMTK KDSKDVGSRS KRMGRSQRKL VNEEELHLQA LSMALQQHQL SQRFEGSMSR RIGSSRRHAV SESFSANKQV
PINLENIKIK KFVLIHGEGF GAWCWYKTVA SLEEAGLLPV ALDLTGSGID LTDTNSVTTL ADYSKPLTVY LENLPEDEKV
ILVGHSIGGA CISYALEHYP QKISKAIFLC ATMVSDGQKP FDVYAEELGS AERFIQESKF LIHGNGKDKP PTGFMFEKEQ
MKGLYFNQSP AKDVALAMVS MRHSPLGPIM EKLSLSTDKY GSGRRFYIQT LDDRALSPDV QEKLVRENPP EGVFKIKGSD
HCPFFSKPQS LHKILVEIAQ IP*