GBrowse Details

Vigan.07G160800.01

Basic Information:
Name: Vigan.07G160800.01
Multiple alignment
Variant Information
Position: Chr07:22316198..22319505 (+ strand)
Length: 3308
Functional Information:
Description: Similar to uncharacterized LOC101215285, partial. [XP_004171424.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:3.89,2.82,27.68,262.57,4.09,61.78,10.01,48.99
Arabidopsis thaliana homolog: AT5G07020.1
Automatic updates:
Name: NM_001289206 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100803864 (LOC100803864), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:22316198..22316445 (+ strand)
Length: 248
Type: five_prime_UTR
Position: Chr07:22316446..22316616 (+ strand)
Length: 171
Type: CDS
Position: Chr07:22317973..22318110 (+ strand)
Length: 138
Type: CDS
Position: Chr07:22318851..22319213 (+ strand)
Length: 363
Type: CDS
Position: Chr07:22319214..22319505 (+ strand)
Length: 292
Type: three_prime_UTR

>Vigan.07G160800.01 class=Sequence position=Chr07:22316198..22319505 (+ strand)
ATTTTCCCAA CAACACAAGT ACTTTCCATG TGTCCACACA TGGCATATCC CAATCAAATT GTCTACCTTC AAGGCTTAAA
CACAACCACG AAACACCAAT CCTCAACACA CAAAATTCTC TCAGGTTTCA CCCACTAAAC CATAACTCCA AGATCCTCTT
CAAAATCCTA AATTTCTAAG AACCCTTTTG TTGTTTTTGT TTTTCTCGAG AGCATTTTGG TTTTGAACTT CAATTTCAGA
CCCAAATAAT GGCTTGTGCA TTTCATGCAA CTTTAGCAGC AAACAGCTGT GCCTTTTCTT CCAGGAGATT CTCCTTGAAG
CATCCAAAAA CCAGTAAGAG AAGGTTTGAT TTGTTCACTG TTAGAGCTGA CTCTGATGAT TCTGACTGCA ATGACGAAGA
ATGTGCCCCG GAAAAGGAAG TGAGTTCTTT AGTTTTCTTA ATCAGTTTCG AGTTTCTTAG GTGTTTTGTT CCATTCGTTT
TGTTTCTTGT GCCCTTTTGG TGACTGAGGG AAAATATGAT AGTGAAAAAT TTGGAAATGT AATAATGAGA AATAAGTTCT
TTTAGTTCTA TAATTACATT TACATGTCTT GGCACATTGT TGTTCTCCAT AAAGATCCTT TGGAAGAAGT TGGAAGAAGA
AGAATTTGAC TTGTGCTCAT TTGTTTTGAT CAATTTAAGG GTCATAACTG TTAGGAATTC AAGTTGACTT AGAATTCCCA
CATTGGATAG ACAAGAATGA TGAGCTAATA GAAGCAAAAA AACACCACAA ACTCATTGTT GAATCTCTTA TATATGGGTT
TGTTTACATT TATTGGTGTC AAATCTCTTT ATGTCTCCCT GGAAGAATCT AACAGTAAAA GAGGTTAACG TTGAATGGAA
AAAGGAAGCT TGGTATGTGT AATATGATAA AATATCTTAG GAATTCAAGA TGAGATGAAA GTCTCATGTT TGGTAAAAAT
GAGCAGGATA AATAACATAA AAGATCCAAA AACCCATTAC CTCAAGGTTT TGGGTTAAAA TTGGTGTCAT GGTTTCTTAT
ATGAGCTTGT TCACGTTTAA TTGGTGCTGA ATCTCTCCAA TGTCTCTCCT CGAAAAACCT AACCATCTCT AGTGCCAGTG
TAGTTCACAA TAATGCTTTT CAGCTCAGGG ATGGACTTTT GGTCAATTTA AGGAGGTGTT TGAGAAATGT TATCATAATT
TGTTGTTGTG GCTGGAATGA TTAGGAAAAT GGTCATTGTC ATTAGATCTA TGCAAGGAAC ACCCCACTTA CATTGAGCAA
TAAGTTAAGT TAGCTTCAAA GTTTTTTATA TGCATATTTT TGTTTTGACC AATTTGTCAT TGACATTTCT TATATAGCTT
ACTACCTGGA TGTTGTGTTC TTATCCTTTT TGATGTTCAA ACATAGTTCC AACAGTTCGT TCTCTAGTTA GCAGAATTTT
GTTTTTTGTG CTCAATGCAA ATTTTTTGAA AAAAAGGAGG CATTTTATAA AAGCTGTCTC AAGAACCACT GTTTCTGGGT
AATTAGCAGA ATTGAAAGAC ATTATATCAT TGTGTGTTAG TAAAATTTGC ACCATTGTTT CACCTAATCA TTAGTATGTT
TCCAATATTA TACCATATCA TCTTTGGCCA GGCTTTGTAA TTGAAGTATC CTGCATATAT ATATTCATGC ATTAACAAAA
GATGAGTGGT GTATCATTAT CCTCCATGTG TGTTTAGCTT CTGCATTCAT CACAGACAAA GGAAGTTAAT CAATCCTCCG
TTGGTGGTGA TTTAGGTTGG AAAGGTCAGT GTGGAATGGC TAGCCGGAGA GAAGACAAAG GTAGTCGGTA CTTTCCCACC
ACGTCGAAAG CCGGGTTGGA CCGGATATGT TGAGAAGGAC ACTGCTGGGC AGACAAACAT TTACTCTGTT GAGGTTAGTA
TTGATCTTTT TTGACTTATT AAATGCAATG TTTTACCATG TTCCCTTGAA CTTTTTATGT ATATTATTCT TTAATTTGTT
GAAGTTTAAT GTTCATTTTG TAAGCATGAA AATGAGTAGC AAACATTAGT AACATGATAG CTGATAAGGG ACTATTATTT
GGGCAATCAT GCATACATTG CTAGTGTTAT ACATGAATTC TGAGGCTAGT CATTGGTATT GCTATCTTGT GTCAAATTGA
AGAATTCATG TTTTTAGAAT TTGAGTTTAA GTCAAACTCA ACCTCAAAAA CTAACTTGTA AAGTAAGAAT TGTCTTCAGT
TATACTTCAA ACAGATATGG TAGAATACCC TTCAAGATAT TAGAAGACAT AATGGTCCAA AATGAGTAGG CCAAGATCTA
CTTGGCCAAC TGAAAGGCTT TACCAATACT TAAATACTTA TAAACCTAAT TATTCTCAGA AGTATGACTT AGGTTTAGAA
TGATTTGAAT GAATGGGAAG CCTTTGAGAG GATCAACTCA ATTTCGGCCT GCTTGCTTTG AACTGTTATG TCTTCTACTA
TTTTTTATTT GTAAGGGATT CGGCCATACT TTTCTTGTAC AGGACTATTT AAACCACATT AGTAATTCAT TTGAGATCTC
TAACACATGT CAGCATAAGC TTGCTTGTTT TGAACTTGAA AACAAAGAGA AATATGATGA TTCAATTTGT CTAACACCTT
GTGATCTTTT CAGCCAGCAG TTTATGTGGC AGAAAGTGCT ATAAGTTCAG GAAGTGCTGG CTCTTCTTCT GATGGAGCTG
AGAACACTGC AGCAATTGTT GCAGGCCTTG CCCTGATCTC AGTTGCTGCA GCATCCTCAA TACTCTTACA AGTTGGTAAG
AATGCTCCTC CTCAGATCCA GCCAACTGAA TACACAGGGC CATCACTTAC TTACTACATC AACAAGTTCA AGCCACCGGA
GATTACTGAA GTGTCCGTGC GTAGTGAGGC AGAACCACCG GCGGCCGTTC AACCAGACTC AGCCACCGAT CTTTCCCAGG
TTCAGGTCGA AGCTCAAATC CAGCCAGAGA CCTCGGATGT GAACATTCAA TCATAGGTGT ATCAGATGGT TGCCACTTTT
GCTACAAAGA CACATCAAAG AATTTATTTT TGTGTCAACA GTATGAGCCA GTGTATACAT ATATAACTCT AAAGATTAAT
GGATGCAAAT GTTTCTGTTA AACATCATTC TTGGTATGCT AGTGTTTCTT GTTTATCCTT TGCTGTGTGT CACCATGTTT
ATCAGAAAGA CGTATGAACA ATGAAATAGT ATAATGTAAA TATGACCTTT CATATTAGTA TTATTTTTTT GAAAGTTATC
CATTTTAATA AAATTAAGAA ATAAACAA

>Vigan.07G160800.01
ATTTTCCCAA CAACACAAGT ACTTTCCATG TGTCCACACA TGGCATATCC CAATCAAATT GTCTACCTTC AAGGCTTAAA
CACAACCACG AAACACCAAT CCTCAACACA CAAAATTCTC TCAGGTTTCA CCCACTAAAC CATAACTCCA AGATCCTCTT
CAAAATCCTA AATTTCTAAG AACCCTTTTG TTGTTTTTGT TTTTCTCGAG AGCATTTTGG TTTTGAACTT CAATTTCAGA
CCCAAATAAT GGCTTGTGCA TTTCATGCAA CTTTAGCAGC AAACAGCTGT GCCTTTTCTT CCAGGAGATT CTCCTTGAAG
CATCCAAAAA CCAGTAAGAG AAGGTTTGAT TTGTTCACTG TTAGAGCTGA CTCTGATGAT TCTGACTGCA ATGACGAAGA
ATGTGCCCCG GAAAAGGAAG TTGGAAAGGT CAGTGTGGAA TGGCTAGCCG GAGAGAAGAC AAAGGTAGTC GGTACTTTCC
CACCACGTCG AAAGCCGGGT TGGACCGGAT ATGTTGAGAA GGACACTGCT GGGCAGACAA ACATTTACTC TGTTGAGCCA
GCAGTTTATG TGGCAGAAAG TGCTATAAGT TCAGGAAGTG CTGGCTCTTC TTCTGATGGA GCTGAGAACA CTGCAGCAAT
TGTTGCAGGC CTTGCCCTGA TCTCAGTTGC TGCAGCATCC TCAATACTCT TACAAGTTGG TAAGAATGCT CCTCCTCAGA
TCCAGCCAAC TGAATACACA GGGCCATCAC TTACTTACTA CATCAACAAG TTCAAGCCAC CGGAGATTAC TGAAGTGTCC
GTGCGTAGTG AGGCAGAACC ACCGGCGGCC GTTCAACCAG ACTCAGCCAC CGATCTTTCC CAGGTTCAGG TCGAAGCTCA
AATCCAGCCA GAGACCTCGG ATGTGAACAT TCAATCATAG GTGTATCAGA TGGTTGCCAC TTTTGCTACA AAGACACATC
AAAGAATTTA TTTTTGTGTC AACAGTATGA GCCAGTGTAT ACATATATAA CTCTAAAGAT TAATGGATGC AAATGTTTCT
GTTAAACATC ATTCTTGGTA TGCTAGTGTT TCTTGTTTAT CCTTTGCTGT GTGTCACCAT GTTTATCAGA AAGACGTATG
AACAATGAAA TAGTATAATG TAAATATGAC CTTTCATATT AGTATTATTT TTTTGAAAGT TATCCATTTT AATAAAATTA
AGAAATAAAC AA

>Vigan.07G160800.01
ATGGCTTGTG CATTTCATGC AACTTTAGCA GCAAACAGCT GTGCCTTTTC TTCCAGGAGA TTCTCCTTGA AGCATCCAAA
AACCAGTAAG AGAAGGTTTG ATTTGTTCAC TGTTAGAGCT GACTCTGATG ATTCTGACTG CAATGACGAA GAATGTGCCC
CGGAAAAGGA AGTTGGAAAG GTCAGTGTGG AATGGCTAGC CGGAGAGAAG ACAAAGGTAG TCGGTACTTT CCCACCACGT
CGAAAGCCGG GTTGGACCGG ATATGTTGAG AAGGACACTG CTGGGCAGAC AAACATTTAC TCTGTTGAGC CAGCAGTTTA
TGTGGCAGAA AGTGCTATAA GTTCAGGAAG TGCTGGCTCT TCTTCTGATG GAGCTGAGAA CACTGCAGCA ATTGTTGCAG
GCCTTGCCCT GATCTCAGTT GCTGCAGCAT CCTCAATACT CTTACAAGTT GGTAAGAATG CTCCTCCTCA GATCCAGCCA
ACTGAATACA CAGGGCCATC ACTTACTTAC TACATCAACA AGTTCAAGCC ACCGGAGATT ACTGAAGTGT CCGTGCGTAG
TGAGGCAGAA CCACCGGCGG CCGTTCAACC AGACTCAGCC ACCGATCTTT CCCAGGTTCA GGTCGAAGCT CAAATCCAGC
CAGAGACCTC GGATGTGAAC ATTCAATCAT AG

>Vigan.07G160800.01
MACAFHATLA ANSCAFSSRR FSLKHPKTSK RRFDLFTVRA DSDDSDCNDE ECAPEKEVGK VSVEWLAGEK TKVVGTFPPR
RKPGWTGYVE KDTAGQTNIY SVEPAVYVAE SAISSGSAGS SSDGAENTAA IVAGLALISV AAASSILLQV GKNAPPQIQP
TEYTGPSLTY YINKFKPPEI TEVSVRSEAE PPAAVQPDSA TDLSQVQVEA QIQPETSDVN IQS*