GBrowse Details

Vigan.07G149900.01

Basic Information:
Name: Vigan.07G149900.01
Multiple alignment
Variant Information
Position: Chr07:19678768..19683253 (+ strand)
Length: 4486
Functional Information:
Description: Similar to Uncharacterized protein. [V7BWY8, Phaseolus vulgaris]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:45.84,4.99,14.63,13.78,17.34,27.61,18.16,10.63
Arabidopsis thaliana homolog: AT1G53400.1
Automatic updates:
Name: NM_001251317 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ubiquitin-binding domain-containing protein (LOC100306399), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:19678768..19678996 (+ strand)
Length: 229
Type: five_prime_UTR
Position: Chr07:19678997..19679033 (+ strand)
Length: 37
Type: CDS
Position: Chr07:19680620..19680742 (+ strand)
Length: 123
Type: CDS
Position: Chr07:19682142..19682261 (+ strand)
Length: 120
Type: CDS
Position: Chr07:19682937..19683001 (+ strand)
Length: 65
Type: CDS
Position: Chr07:19683002..19683253 (+ strand)
Length: 252
Type: three_prime_UTR

>Vigan.07G149900.01 class=Sequence position=Chr07:19678768..19683253 (+ strand)
GGAAGGTAAG GTAGTAGAGT GTAGCCATTA CCGTTACCCA CTGCAGTGGT TATCGTGACA AAGCGACGTC ATTGACTTCT
CATCTCACTC ACAAGCAATC CCCTTCTTTT TCTTTCACCT CTTTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCCCT CTCTCTCTCT CCTTCTGCGA TGGGTTGTGC
TGGATCTTCA CAATCCAAGC CTGATGGTGA GCCACCCCAT TCCTTTGATT CCTCCAAAAC CTCATTTTTG CATTACCTTT
TAGTTAAATC TTTGGGAATT TTATTCTGGG TTGGTGTCAA AATCGGTTCT TTCTGGTTGT TGTTAATTGG GGTGCTGATA
TTTGCGAACG ATCGTATCTG GGGGACTGTG TAAAATTGTA ATTTCGAAGA GGAAGGAAAC CAAGAGAGGT GCATGGGGTG
AACGAATTAC AAATCTGTAT TTTGGGTTTT GGATATTTTG CGACATTTTG TATTGAATAA TGAAAATCCT ACCTTGTGAA
ACTGTTTCGA GCATTTCTTG TTTCATGCTT GATTTTCCAA GAAATTTTTG GCGTTGTTAT GTTTATTAAT CTGTTGGATG
ACTTGGGGGT AAGAGTTAGG AATGGTTTGC CAAACTTATT AACACCGCAT GGTGCCTTGA TTTGTTTTTA ATTTCAACTC
TTTTGTTTGG TACGTGTTTG GGCGAGTATT GGCAAAATTT ATTCTGAGTG AAATTGATTC TTTAGTGATG TGGTTCATCT
TTGGCTGCTT TTTATTCTAA AATCTAGGTA GTTTTAAAAT TCGGTGTAAA CTATTTTTGA TTCAACTCAA AAAGCTAAAG
TTGCTTTAAC TCACTCAATT TTCAACCTAG AATCAGTGGG TTTCTGATTT AGCATCACAT CAAAGGTGAT GTACGTCCAT
GATCACTTCA AAGCAGAAGC GGCTCTGTGT AGCTTCTCTT TTTCTGAGTG TGAGAACATA CTCTCAATTT CTCAATGTGG
AAATCATGTT ACTTGTTTTT GTCAGCATGA TTTTGGATAA GTCAACATGA AACCAAGAAC ACTTGGTATC CTTCTCTTAT
TTGTAGTTTC AGAAACATTA GTCTCGAATG AGGACACTCC GTGTGAGTTT TTTTTTACTG AATTGAGTTT GGAATAGTTG
GTTTTGAAAT GGACCCTACT GCTGTTGGGT TTAGTTTAGA TCATTGAGGT TTTGACTAAA TTTCAGTAGT TTGGTGTAAA
CATGTGAAAG TTCTTGAGTG AAGCCAGTTT ATAAGCTTGT TGCTGTACGA ATTTTAGAAA ACAAAGAAAA TTAAATTTAT
GACAGAATAC TGATGGATTT ATTTTCTAGA ATTATGTGTG ATTTTATTGA TGATGCCAGC TGAGTATCCT CGCTTTTAGT
AAGGCCTATT CCCTCATTAC CCCTTTCACC TGACCCGAAT GGTGAGTTGT GTGGTCTAAA CTTTCTGATA GTCTTACCTC
AAATTTGTTC TGTATTGGTG GTGCTGATCT GATATCATGA AGGGGGGAAT ATCCTTGGTA AAGATGGCTT AAATTTAAAC
CACAAAACGA ATGCATAGAA TAAGGTGGTG CAGCACATTA CTATCTTCTA TTATGCTTCA TCTCATAGTA TAAGTGTTCT
TGTTGTGTTG CTAATCTGAA TTCTTGATAT TCATTATTTC AAATGCTTGT GGTTAGATTT TTCATTTTTT ACATCCTCCA
CAGTGTTGAA CTATCCTTGT AATGGCCTGT TCCTGATGAC ACTGCTTAAA TTTTAAGTTT AATATCGTTT GCCATTTACA
CCAACATAAC AGGTGCAGTA AAAAAGATCC GGAAGCCTAA GCCATGGAAG CATCCTCAGC CAATAACGAA GACTCAGCTA
ACGCAATTAC GTGATGAGTT TTGGGACACA GCTCCTCACT ATGGTGGCCG GAAAGGTATT ATTACAAAAC GATAAATGAC
CATATTTAGA ATGTTTAAAG GCCTACTGCA GATTAAATTG GCTTTAGAGG AATAGTAGTT TAAGTGGAAG TGATTTCTTT
AAAATGAATC AGCTCACCTC CCATAGTTTG CTGCTGTTTG CCAATTTCTT TATTTTTATT AGTGTTTTTA GTGGTTAAAA
TTAGTTATTT ATTGCTTTGC AAATTTTCCT TAATCTCCTC TAACACGGTT ATCTTCTAAG AACTTTTTAT CATTATTGAC
ATGATTTTGT TCAACAAGGT TTGTAATTAT TGAAGATGTA AATTGACAAT AACCAAAGTT TGTTATTTGT AATCCCAAGC
TAAACTAGTT CTTCCATTAG TTCATATTCT TGTTAGAGAA TGCATAGAAA GTTGATCAAT TATGGGTTGT TATTTCTTTA
CCAAGAAGAA ATTCTTGAAA ATGTTGTTTG CAGAGAGTCT GTATATTGTT TGTTCACATG TGGATGCAAT AACTTGCAAT
GAGACTGAAG AGTGTTTATC AGGAAAAAGT TGGACATGGG AACTTTAACT TGAAGGGAGT AGATGGCTGC TGGCCTGAGG
CAGTAGAGAT TGAACATCGT AGTTTGATAA ATATGCAATA CTGCATGTTG GGTTAGAACA GCTTTCCAAT AATTTTTTTA
TGGTATTTTT TCTCTTTAAG GGAACCATTA TTCTCTTGAC AATTTGTGGA GAGGGAGGGA GGGAGAGAGA GAAGATTGGA
TGATCATCCT TTGAACTTTG TATTCTTGTT ATCTTATTGC ATATCATAAG CAAAAGGTTT TATCCATTCT TACATCTATT
AAATATGATG CCTCAGATAT AGAATATTTT TTCTAAGTTG TACTTTGATT CTCCATGTAA AGACTGAAAG TGGATTTTTA
ATTTTGTCTT TCTATTACGT TATTGTTTAA AGCTAATTTT GGAAAAAAGG ATGATAAGGT TAGAATTTAC ATTAAGGAAG
AAATGGAAAA TGTCGTACTT TTATAAGAAT CATGTTTGGT TGTTGGTGGC TTATCTGTGA TATTTAACAC TGCTTTATCT
GTCGTGCTTT ATATATAGAA AACTGCACAG ACAAGAAACA TGTGAATGAA AGCAAATTAA TTACAATTGG TTTAGATGAT
TGGTTGACTT GATGTTTGAG TATTGTTGCC AAAGGAATCA TCCATTGCAT TCAGTTGTAT AAAACCAATT TCTGCAAAAA
TGGTATATGT TATTATGTTT AACAAATGCC ACTAAAATAT AATACTTATC CTTATTAAAA GATCAGATTC TATAGGTTTA
CACAACATTT TATTTGTTAA TCACTCTTTA TTTCATTTTT TCCTTAATTA CATTCTTAAT TGAAGTGCAT ATATATTTTT
GTGCTTGCTA CTAGAGATTT GGGATGCTCT TCGAGCTGCT GCTGAGGCTG ATCTAACTTT AGCACAAGCA ATTGTGGATA
GTGCTGGTGT AATTGTCCAA AGTTCTGATT TGACAGTATG TTATGATGAA AGAGGTAATT GTTTCATGTT GCATTCCATT
ATCTACAAAT AGAAAGGAAC ATTAAAATTA TGGAAGATAC AATGTTTATT TGGTTTCCGC AATCTGAATT GAATTAGTCT
TGAAAACTCA GTGTCTTTTG TTTAATTTTG AAATCATTAT ATGGCTAATG AAATCAGAAA TGAAGTTGAA AAGCATCTAA
AGAACTTTTA TGCCATGAAC TAGTGGGCTT CTTGCAGCAC TCTCACACTT TTCCCTTAAT TATCCAACTG TGGTCCACAT
TTAGTTGAAT CATGTGACAC CCACCTTTAT TGTGGATTAT GGTGGAAAGC TCTCTAAACC CCACCATTTC TTTTCTCAAC
TCAACTACCC TATTACATAA ATAAGTACTA TCACTCTTAC AACAAAAACC TTTATGATGA TGATATATTT TATTTCATTG
TTCATCTCTC ACCTCAGAAA ACAACACAGT TGGTGTCAGT ACAGAAGGAT ATGTATTTGA AGGATATGTA CAAGGAAATT
CAGTACAGAA AGTTAAAAAT AGCTTAGCCT GAGATACTAT GATGATGAAA ACAAAATCCT TGAAAATGTC TACCAGAATT
TGAGCTATTT CACCTTGTGT TTGTTATTAT GGGGCTAGAA TATCATGTTC ATCTTGTTCT GATCCTTTGC ATTGAACACT
TTTTTGCAGG AGCAAAGTAT GAGCTGCCCA AGTACGTATT GAGTGAGCCA ACTAACCTGA TTCGGGACAG TTAATAACAG
AGTATAAATA GAAAGATTAA TGGGAAAGAG ATTGTAAATC TTGGTGTATA TGGTTATCTC ATTGATTTGG TAACTTGCAT
AGGGTAGCAA CTCTTTTTCC TTCCTGTTAT GTTTCCTCAA TCAATTAAAC AAAAAAAAAA TGTTTGTTCT GTATCAGATG
ATCGAATCCC TCTTCTTTGG TAAATACAAA CTCCATTTAT GTATTTCCGA AATATCTCAT TCAACACGTC CATATATTTT
TGTAAA

>Vigan.07G149900.01
GGAAGGTAAG GTAGTAGAGT GTAGCCATTA CCGTTACCCA CTGCAGTGGT TATCGTGACA AAGCGACGTC ATTGACTTCT
CATCTCACTC ACAAGCAATC CCCTTCTTTT TCTTTCACCT CTTTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCCCT CTCTCTCTCT CCTTCTGCGA TGGGTTGTGC
TGGATCTTCA CAATCCAAGC CTGATGGTGC AGTAAAAAAG ATCCGGAAGC CTAAGCCATG GAAGCATCCT CAGCCAATAA
CGAAGACTCA GCTAACGCAA TTACGTGATG AGTTTTGGGA CACAGCTCCT CACTATGGTG GCCGGAAAGA GATTTGGGAT
GCTCTTCGAG CTGCTGCTGA GGCTGATCTA ACTTTAGCAC AAGCAATTGT GGATAGTGCT GGTGTAATTG TCCAAAGTTC
TGATTTGACA GTATGTTATG ATGAAAGAGG AGCAAAGTAT GAGCTGCCCA AGTACGTATT GAGTGAGCCA ACTAACCTGA
TTCGGGACAG TTAATAACAG AGTATAAATA GAAAGATTAA TGGGAAAGAG ATTGTAAATC TTGGTGTATA TGGTTATCTC
ATTGATTTGG TAACTTGCAT AGGGTAGCAA CTCTTTTTCC TTCCTGTTAT GTTTCCTCAA TCAATTAAAC AAAAAAAAAA
TGTTTGTTCT GTATCAGATG ATCGAATCCC TCTTCTTTGG TAAATACAAA CTCCATTTAT GTATTTCCGA AATATCTCAT
TCAACACGTC CATATATTTT TGTAAA

>Vigan.07G149900.01
ATGGGTTGTG CTGGATCTTC ACAATCCAAG CCTGATGGTG CAGTAAAAAA GATCCGGAAG CCTAAGCCAT GGAAGCATCC
TCAGCCAATA ACGAAGACTC AGCTAACGCA ATTACGTGAT GAGTTTTGGG ACACAGCTCC TCACTATGGT GGCCGGAAAG
AGATTTGGGA TGCTCTTCGA GCTGCTGCTG AGGCTGATCT AACTTTAGCA CAAGCAATTG TGGATAGTGC TGGTGTAATT
GTCCAAAGTT CTGATTTGAC AGTATGTTAT GATGAAAGAG GAGCAAAGTA TGAGCTGCCC AAGTACGTAT TGAGTGAGCC
AACTAACCTG ATTCGGGACA GTTAA

>Vigan.07G149900.01
MGCAGSSQSK PDGAVKKIRK PKPWKHPQPI TKTQLTQLRD EFWDTAPHYG GRKEIWDALR AAAEADLTLA QAIVDSAGVI
VQSSDLTVCY DERGAKYELP KYVLSEPTNL IRDS*