GBrowse Details

Vigan.07G123700.01

Basic Information:
Name: Vigan.07G123700.01
Multiple alignment
Variant Information
Position: Chr07:12281709..12288166 (+ strand)
Length: 6458
Functional Information:
Description: Similar to uncharacterized LOC101224066. [XP_004171452.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:195.28,99.81,16.79,21.14,27.08,21.27,25.28,20.39
Automatic updates:
Name: NM_001255551 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100779923 (LOC100779923), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:12281709..12281819 (+ strand)
Length: 111
Type: five_prime_UTR
Position: Chr07:12281820..12281904 (+ strand)
Length: 85
Type: CDS
Position: Chr07:12282124..12282178 (+ strand)
Length: 55
Type: CDS
Position: Chr07:12287751..12287913 (+ strand)
Length: 163
Type: CDS
Position: Chr07:12287914..12288166 (+ strand)
Length: 253
Type: three_prime_UTR

>Vigan.07G123700.01 class=Sequence position=Chr07:12281709..12288166 (+ strand)
TTTCTTTCAG AAATACGTTT TAATACATAA TAGAAAAGGG TATTTGCTTT TGCCAAAACC AACCGCACTG CACTTTCTCT
GCTTCGCCGT CGCCTCCTCT TCCCAGCAAT CATGGCAAAA AATAGGAATA ATAAGAAGAG GAACGGCGTC GTTTCAATGG
ATACCACCGA CGCATCCGTT TCGGAACAAC CTCAAGGTAC CCGATTCATC CGTTTCTCTT CCTCTTTTAC TTTCTATGCT
TTTGGTTCAA ATAAACATTG AAAATAGTTG AGATTTTAAT TCTTTTAATC TTTCACTGGA ACTTAACTCC TGTCTTACAA
ATCTTATCCC TTTTAAACCA TTGTTTTGCT TTAATTTTAA ATTTTGGCTT CTACTTTCTT GTTGTGATTT AAAATTGAGA
TTTGTTTACT TGCAGCAATG GATACGTCAG AGTCAAGAGT TCAAAATGCG GTTTCCGGTG CTACCAATAT GTAAGTAACT
AATTGCTCTC TAGGTGATGA GAGATAGATG GTTAATTTTA CTTTACTGTA GAGAGGTTTT ATAATGATCT GATTTATGGA
TTTATTTCTC TAGAGTAAGC AGAGATAAAT TAAGTAATCT TGATTATTGA CGAGATAATC AGTTGTTAAT ATCAACACCT
TATGATTTGT TATACATGCG AACCTTAATG CTTTGGTCAT GGGTACTTGT GAATGTTGTC TGCATTTTTC CGAAATTATT
GCCTGGGAGT ACCGAACTCT GTAGAATAGT GTGTTGCATC TGTCATGTCC GAGACGTTTT TGGACATGCA CTTTCACAAT
TATAATTCTT TCTTAACTCA GACACCTCTT TGACACTTCT TTAGACATCT TGACACAACT TGAACATGAG TAAGGAAATG
AAGTTGATAC TTATTCTTGG CTAAAACACT TCCTAGACAA TACTGTAATA GAAAAGTAGT AAAGAAATTC AAATGAAACA
ATTTATGTAA CATTCCAAAA ATACAGTGTA AAACCATATT ATAGAATACT TACACTTAAT AAAACTACAA TGTAGTTAAG
AGGGGAAAGA GTACAGTTAT GGCTGAACGG CCTTACTAAA ATACTACAGA GTTTTTGAAT TTACAAAAAC GAGCTACTAT
GCCGAACGGT TCCAAAACTA AACTTTTAAC CGAACGGTTA TACAAAACAA AAATAACTCT CACTGCCGAA CGGTCTCAAG
GTTTAGCCTC AACCTCCACT TCTAAAGTTT CTTCCAACAA CTCTTCTCCT TCTTCTCACA TCCACAGGAT GATCATTGCA
ACAGGAAGAT TACAACCGAA CGGCTATATA GATAAGACAG GAAAATAAGA TAAGCTTATG TAATTTAATT AATTCAGTAA
ACATGTATTT CACATAAATC TGATATGATT CAATAGGTCA ATCATACAAC AACCAATTAT ACATTTTCAA TCATAACCAT
ACATCAATAT AAGCAAAAAC CGACCACTAT CAGACTATCC GGACTGTATG AATTTTGTGT AGTTAGGACG TTTTTGCACC
CGGGTGATGT AGTAGCTGGG ATGCACTTAA CAGCTGCCAC TCGAGGTTAG TCCGGTAAAA TTCGTCCATC TTAACTTATG
GACTAGGACC TCCTGCCATT CTCACACATG ATTTACTCCT CTCTACTTGA GAATGAGTAA TCATAGAATA TCACGATAAA
TGCCACCTTA GCATGACCAC ATTCATACTT TATCATTCAA TAACCAAATT CTGAGATATT CCTCCCTGGA ATACTCTTTC
ATAACTATAC TATTTCATTC ATTTCACAAT TTAAATACCA TCATACTTCA TCATCAATAC ATTCAAACTG ACCCAAGAAA
ATAATAACCC ATCTTAGAGA CAAGATCAAA CGAGAGAATA CCTCTTAAAC TTATCTAACC GAACACTTAG TGTAAGACCG
AGCGGTCTTT CACTTATCCA CAGAATAGGA CCGAACGGTC CATACGAGGC AAGACTCATC ATAAGCCTAA CAATTGTAAT
AATAATAAGA AACGTTTACT GGATACACAA CAATTTTGGC CGAAGAGTCT TTACTAGACA GAACTCATGG AAGTTGGGTA
ATACTTTATA ATACTTATAT TTAAACCTAA CTGACGATGA TGAAAGTTTT TATTTGAACT AAGTTTTAAA CCGAACACTA
CCAACTAGGG CCGAACACTC TTAATACCTA ATGCAGATAT ATTACAGAAT ATTATAAGAT CGAGCACTTA ATTTGAAGCC
AAGCACTACT GAGATCGAGT ACTTGGTTTA TGACCGAGCA CTATTGAGAC CGAGTACCTG GTCTATGACC GAACACTACT
GAGACTGAGT ACCTGGTCTG TGACCGAGCA CTACTGAGAC CGAGTACCTG GTCTATGACC GAACGCTTAC TTACAAATAT
ACTAAGATAA AACCGATCGG TCATTAACTG AAATTCTCCA CAGAAGAAGA ATTCAGTTTA GACCGAACGT TCGAAGGAAA
ACTGAATGGT CAATAATGAC TCTCGGTGAC AAATACAGGA TTACTCAGAA AACTACAGAT TTGAGATCAA ACCCTACACC
AACTCACTTC ACATTATTCA TAAATCATCC ACTCATATAA ACAACCATGC AGTAACACCT ATATTTCATA TTCATCAAAT
GATCAAACAA ACATACAACC ATTCATAACA AAGAATCATA ATCAAATTAT ATAAGCTTCC CTTACCTCTA AATATAGCTG
AACGCTCACA GTTGAAGTAT GTTGATCACC ACTACCACTC TTATACACTT AGAGCTCACC GATTTTAAAA CTAAACCAAA
TACAAGACCA GAATTGCTAT CAGAATGAGA TAATACACTC ATGCAACCAG AATTTGGGTT TGCATGTGAC AGAAAAATGA
ACGTTCTAAG AAGAGAAGTA CTCACCAACT TAAACCACAA CTTGATCGGT GCAAAGTGTA GCTCTTGGCA CCAGAAATAC
TCAGGCGTTG CCTGAATGAT GATCGGAAGA AGAAAAGGAT GAGAAATCGT AGAGAGAAGA TGGAGATTGT AGAGAGAAGG
AGGAGAAAAT GGAAGGTTTC AGAAGGTTGA AGATGAAGGG TGCATGTAGA AAAGTGGCAC GAAGTTTGAA ATTTCGCCTT
AAATACTACC GTCACTAAAA CCGATCGGCC ACTTAGCGCT GCACACCTAT CTTCCACTAT CTGAAGCTCT GATACCCTTC
CATTGACACC TGGCTTCCAC TCACACGAAA TTTAAGGGTT CTGACAATTT ATATTATAAA TAATGCATGA CTCTTTTTTT
CAAGCTTGTC TTTATAAAAC TTAACTAGTT ATTTTAACTA TTAAGATGCA TGTTTCTTAT TTAGAGTTAC TTTGTGAAAG
ATTTTATTAC GGGAAACTGT AACACATTTG TTTTTATAGT TTGAAAATTC TGAATTGAGA TTTTTGTCTC ATTGATTATA
TATATTAGCG GTGTTGCCTT ATCCTATATT TTGGATGTTA GCAATGTTCC GGTGTCTGTG ATAGTGTCAT GTCCGATGAA
TGCCTTACAG ATTATTGCAA TTGAGTCCTG GCATAACCTT TTTTCTGTGC AATAGAAGGG TATGAATATT GCCTTTCCTT
TTGGCCTTTA TTCTCACTCA CTCAAATGCA TGGTTTTAGA TTGTGGTTAT GATTATATTG GGAATATCAT AGTAGTGGTT
TGCAATTGCT GTTGCGATAT GGTTGAGTAG ATTTTAACTT CTCAGCAAAC TTACCAATTG ATGTTGCTTA TTGATAAATC
AAGTCATCTT TATAGCGATT TGCACTAGTT GGACAATTTA GATATTCATT AATTAAGACT TAAAAAACTT TAAATCAATA
TTGAAGCAAA GACAATAAAT ACTATCCTAC AATTGAAACA ACAAATTGAA TAAGATTTAT ATAGTTTTTC TAAAGGACTT
GCAAGCTTAT AAAAACTGAT TAAAAGGGTA TAAAGATGTC ACCATGGTTG GGTTTCATGA ACTGGACACA ATAGTTTCCA
AAACTTTAAT TATAATTTCG AATATAACTC TTACAATGTT TGGATTAAAT GAATTTCACA AAGAGGTTAA GCCAATATTT
GTTTGATAAG CTATTTGTAT AACCGAAAAG TAATCATAGA CACTTTTATA CTAATTTACT AACTCAAATT GAGCTACATC
TAGTTTTACT TCAAGTAACT TATAAAGGAT TCCTGTCTAA ACTTATTACA ACAATTATTT CAACTTCTTC TGGTTCACGA
GTTCATCAAG TCACTCCTGC TGACTAACTT TCTCAATCTC TTCCTGAAAT TATGAAATTG AGTATTCTTT CACACAAAGT
CACTCCAAAG TGTCATGAGT ATTGTTTTCT TTGTCACTCT TGACTTACAA ACAAGAGTTT GATGGAAACA AGATCAACTC
TTAGAAGAGA GGATTTACAA ATAAGACTAC TCCTGAAAAG ACACCAACTT CAGTAAGTGG ATAATTTACT GGTAAAAGCT
CTTTCTTAAA CTAGAAGACG TAGGTAGACT GTTTAGTGTT CACTTTTTTA TGTCAAGATT TTTGTGTGCA ATCTTTTTGC
ATGAATTGGA CGTGATTCTC TTTTATTTTT TTGGTAATAT TCCAGTGGTC CTTGCATGAG TTTGAGCATC TCCTTGTATA
GGCATCTTAG ATATGACTGG TGGAGCTTGC ATGTGTTTCT TCATAAGGTT TTGAGCTTTC CAAAGTGAGG TTTGCACCCA
CTTATATACT CTAAATTGGC TTTATATCTG TCGATGTGGG ACTTTCAACA CATTTCCCTC ACGCCGAGGT ATATACATCT
CGAGCGTGAG ACTAGACATT AATGGGTGGT CCGCTAGTGG CTCGATAGCG GATGGAACAA CATGTCCAAC AAACAACAAA
TATCACTAGG ATAGGCTCTA ACTATAGCTA TGATATCATG TTAAAAAGTG TACTTTAAGC CTAATTCAAC CCCACAAAAT
TGGCTTGTAA AGTAAGGTTT GCACCCATTT ATATACTCTA AATTAACCTT ATTTTTAGTC GATGTGGGAC TTCCAACAAG
ATGTGTGTTT GACCTTTTTC ATGTTTTTTC CAGAAAGTTA GTTGCATGGC GAAGCATGTA AGTCTCATGA CACGAGATAA
CATGCTTTTG TGTGTAGAGG GTTGTAGGAA GTCATTTGTT GACATAGAAC ATGTTACTTT TTATCAAAAT AAACCTCAAA
TTCAGGATGG TCAACCTGTA TTGTTTATAG ACAGTCTGCC AGTGCTTTGA GCTTACACGT CTTGTGCTAC AAGGCTTTGT
CTATATGTAG AAGTTTCTTG TGAGCTCTTA GATGGTAGAT GGCTTGACGT ATATGACCTA ATAGATGTTT GAATATGGCT
TGCGTGTTTT TGTTCAGCTT TAAGTCTTTG CAATTACTAG TAATACATGA TAATTAATAG TAGGGATTGC CTTACTATGT
AAGAGATTAT GTGTATTAGA TTGTTCGGGG CCAACAAACA TAAAGTAAGT TCTATTCTTA ATGCCAGTTT GCTGAGTTGA
TGGATTGTCT ATGTTGTTGA ACAAAACATG ACAGATTTTC TTTGAGTGTT GCTTAAGGTT CATGTAATAG ATTTTATTAA
TTGCTTTCAA TTACTAAAAA TATTCAGTTA TTTACGTTTT TACTTTTAAG AATAAAAGAA CTTATGATCA TTTCTCATTA
ACCAATATCA TAAAATCACT AACATGGTTA CTCCTTAACC AGTGTCATCA AAAGCACCAA TAAGCATTGG TTTATACTTT
CGAGTATAAA TTATACTTTT TGTTTCATTA ACTATTGTCA CTAAAACGCT TATTAAATTG TTTCTCCTTT GATACTTTTG
CTCTGTTTGC CCCTCAAGTA TGGGCAGAGG TCTTGTGCCG GCTAAAGAGT TTCATCCCTT TGAGTCTATT TAACTCTGGC
ACCTCAAATA AGGATCACCT GCTTCATGTT TTCCATATAT TTGCAAAAAG ATATGACGTG GCCGCTCTCT TAATATTTTC
TTCTTCTAAA CTGCCTTTAA CTATTGATCT CTTATAAAAC AGGAAGATGA AGCAGAAAGG AAGGCCAATG AAGAGATCAA
AAAATGTCCG AAAGATGAAA GCAATAGCCA AAGCTGTATC CTCTAACGAG AAGTCCATTG AGAAGGTGTC GAAGAATGAA
AACAAAAGAA GTAGAGTTAA ATCTGCAAAA TCACTCTATG AATGAACGAT CAAGTGCCTC ATATCACTTG AAGAAAGTTT
GATATATCAA GATACATGCC TTTTAAATTT AATGTAGCTA GATATAATTA ATTATTAGTT TAAGAGTTCT TTTTAAGAAT
GAAGTTCCTT TCTTGTTGCA TCCTTATGGT AATTATGATT TATAGTTTTA TGTACTTTCT TTCTGCTGTC TAAATGATGT
TAAGGTAAAG TCATAGCTCC GTTTCTACTA TTAAGCATTT GAGTTCATTC ACAGCCCA

>Vigan.07G123700.01
TTTCTTTCAG AAATACGTTT TAATACATAA TAGAAAAGGG TATTTGCTTT TGCCAAAACC AACCGCACTG CACTTTCTCT
GCTTCGCCGT CGCCTCCTCT TCCCAGCAAT CATGGCAAAA AATAGGAATA ATAAGAAGAG GAACGGCGTC GTTTCAATGG
ATACCACCGA CGCATCCGTT TCGGAACAAC CTCAAGCAAT GGATACGTCA GAGTCAAGAG TTCAAAATGC GGTTTCCGGT
GCTACCAATA TGAAGATGAA GCAGAAAGGA AGGCCAATGA AGAGATCAAA AAATGTCCGA AAGATGAAAG CAATAGCCAA
AGCTGTATCC TCTAACGAGA AGTCCATTGA GAAGGTGTCG AAGAATGAAA ACAAAAGAAG TAGAGTTAAA TCTGCAAAAT
CACTCTATGA ATGAACGATC AAGTGCCTCA TATCACTTGA AGAAAGTTTG ATATATCAAG ATACATGCCT TTTAAATTTA
ATGTAGCTAG ATATAATTAA TTATTAGTTT AAGAGTTCTT TTTAAGAATG AAGTTCCTTT CTTGTTGCAT CCTTATGGTA
ATTATGATTT ATAGTTTTAT GTACTTTCTT TCTGCTGTCT AAATGATGTT AAGGTAAAGT CATAGCTCCG TTTCTACTAT
TAAGCATTTG AGTTCATTCA CAGCCCA

>Vigan.07G123700.01
ATGGCAAAAA ATAGGAATAA TAAGAAGAGG AACGGCGTCG TTTCAATGGA TACCACCGAC GCATCCGTTT CGGAACAACC
TCAAGCAATG GATACGTCAG AGTCAAGAGT TCAAAATGCG GTTTCCGGTG CTACCAATAT GAAGATGAAG CAGAAAGGAA
GGCCAATGAA GAGATCAAAA AATGTCCGAA AGATGAAAGC AATAGCCAAA GCTGTATCCT CTAACGAGAA GTCCATTGAG
AAGGTGTCGA AGAATGAAAA CAAAAGAAGT AGAGTTAAAT CTGCAAAATC ACTCTATGAA TGA

>Vigan.07G123700.01
MAKNRNNKKR NGVVSMDTTD ASVSEQPQAM DTSESRVQNA VSGATNMKMK QKGRPMKRSK NVRKMKAIAK AVSSNEKSIE
KVSKNENKRS RVKSAKSLYE *