GBrowse Details

Vigan.07G104900.01

Basic Information:
Name: Vigan.07G104900.01
Multiple alignment
Variant Information
Position: Chr07:9294022..9298374 (+ strand)
Length: 4353
Functional Information:
Description: Similar to Ketol-acid reductoisomerase. [V7BUR4, Phaseolus vulgaris]
GO: Biological Process: cellular amino acid biosynthetic process (GO:0008652)
Biological Process: branched-chain amino acid biosynthetic process (GO:0009082)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: ketol-acid reductoisomerase activity (GO:0004455)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616)
Molecular Function: coenzyme binding (GO:0050662)
InterPro: Acetohydroxy acid isomeroreductase C-terminal (IPR000506)
6-phosphogluconate dehydrogenase, C-terminal-like (IPR008927)
Acetohydroxy acid isomeroreductase (IPR013023)
Acetohydroxy acid isomeroreductase, catalytic (IPR013116)
Dehydrogenase, multihelical (IPR013328)
NAD(P)-binding domain (IPR016040)
Ketol-acid reductoisomerase (IPR016206)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:812.11,569.89,107.05,103.55,174.34,336.18,135.79,165.30
Arabidopsis thaliana homolog: AT3G58610.1
Automatic updates:
Name: NM_001289357 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max ketol-acid reductoisomerase, chloroplastic-like (LOC100812763), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:9294022..9294242 (+ strand)
Length: 221
Type: five_prime_UTR
Position: Chr07:9294243..9294512 (+ strand)
Length: 270
Type: CDS
Position: Chr07:9294592..9294684 (+ strand)
Length: 93
Type: CDS
Position: Chr07:9295020..9295085 (+ strand)
Length: 66
Type: CDS
Position: Chr07:9295224..9295364 (+ strand)
Length: 141
Type: CDS
Position: Chr07:9296154..9296381 (+ strand)
Length: 228
Type: CDS
Position: Chr07:9296484..9296601 (+ strand)
Length: 118
Type: CDS
Position: Chr07:9296676..9296815 (+ strand)
Length: 140
Type: CDS
Position: Chr07:9296951..9297118 (+ strand)
Length: 168
Type: CDS
Position: Chr07:9297193..9297348 (+ strand)
Length: 156
Type: CDS
Position: Chr07:9297533..9297901 (+ strand)
Length: 369
Type: CDS
Position: Chr07:9297902..9298374 (+ strand)
Length: 473
Type: three_prime_UTR

>Vigan.07G104900.01 class=Sequence position=Chr07:9294022..9298374 (+ strand)
AAAATATTGG CAATGTGTGG CGTTAATCTC ACCTACTCGT GCACGCTTGC AGATATACAC GGGCGTACAA AAGAAGTGGA
GATTTCTCAC CGACACCGTA TGGGCGCACT TTAGCATACA CCACTCAATG CTCACAGTAT AAAACCCCCA ACAAATATAC
TGCCGCTTCA CTCATTGAAC CCTTCTCTTT ACACCCAAAC AGACACACTC TACTCCAAAT AATGGCGGCT GCGACGACGT
CGTGCTCTTC TGCAATCTCT GCCGCCTCTG AAACCCTTGC CAAACCTTCT TCCAGAAGCT TCTCTGCTAC CAGCCTCGCT
CTACAATCCT CTTCTTCCAA ACTCACCTTT AAATCCCTAA AGCTGAGCCG ATGCGGCGCC GCTCTCGGTG CTCGTATGGT
GGCGGCGCCG GCTGTGAAGG CTCCCACGCA GCTCGATTTC GACACGAAGG TTTTCAAGAA GGAGAAGGTT AACCTCGCCG
GACACGACGA GGTTCTCGAA AGATTTCTTC CATTTCCAGA TTCGTGAATA TAAGTTTCTT TTGTTTATTT TTTATTTTGA
TTCATTGCAG TACATCGTGA GAGGAGGCAG GGATTTGTTC CACTTTTTGC CCGACGCTTT CAAGGGGATC AAGCAGATTG
GTGTCATTGG CTGGGGATCT CAGGTGACTT TCGAGGATTC GTATTTAAGT AAAGGCTAAA ATGTGTTATA TGTGATATCA
TTTATAAGCT TGAAATATCC GATCCATGTT GTGGGGAATC CGTATAGTGG AGAATCTCGA TTCTCAGTGG TAAAAAACTT
TTCGGTTTAG CTCTTGCACT CTGGGCTTGG AATCCCGTGG CAAGCACAAA ATTAGTTAAT TTTATTTATA TTTGAGTTCG
GAGAGTCTGT ATTTAATATT TTGTTTAAGC TTAAAAGCTT ATGGCTTAGT ATTTTTGTTC CGATGATGTT GTACTTCCTA
GCTTTGATAT GATTGCTAAC AAGGCGCTGT GCTTCCAGGG ACCTGCCCAG GCTCAAAATC TTAGGGACTC GCTTGCTGAA
GCAAAGTCCG ATATTGTGGT CAAGGTGTGA TTCTTGTTTT CATTTGTTAT TTATTTCAGT TTCCTTTACT TATAATATAT
GAATGTATGC TGAAATTGTT GATTAATGGA TGGCTGGCTG ATTAAATGTA TTGTTTGTCG TTTCTATGAT TTAAAAATGC
AGATTGGACT CAGGAAAGGT TCTCGTTCCT TTGCTGAAGC TCGGGCAGCC GGGTTTACTG AGGAGAATGG GACTCTTGGT
GACATATGGG AAACTGTCTC GGGCAGTGAT CTTGTGATGT TGTTAATTTC TGATTCCGCA CAGGTTAATT AGTTTAACTC
AATGCTCCAT ATACGCATTC TGATTCTTCT GTTGCCGTTT ATTTTGTTTC TGAAACTGTC TGATTATTAC TATACGACGT
TATTCTGCAT TGCGTGAGTA ACAATAAGGT TTTCCGAGTA TCAGTGAGAA TTCTTTTTAT AAAATTGCTG GATTAATTTC
AACGTGAGTA ATCAGAAATC GGACTTGTCT TCTTTTGGAA CTGTAAGTGT TTAGATATTA TCATCTACTT CGCCAAAACT
GTACCGGTAA TGCAGCTTAC TATTACCAAT CCACCATGAT TTTCACACCC CAATGGCATT ATATATTCTT TTACTTACTT
GATCACCATC CGTTTACAGT TAGCTCCTAC CGGTTTCCAT CACCACCAGT TAACCGTTTG CTATTACCAG CTTCCATCAC
TGTCACAATT CTTAATTTTC CCCATTTATT ATTTTAAATA AAAAAAATTA TTTTATAGTT CTGTTTAACA TTTTCTGAAA
ATATTATTCC AACATATTTG TAGCAGGGCA AGATAAGATT TGTCCCAAAT CTCAAATGTT TTCTAAGAAT GTGATACAAT
TTGTTTTCTG AATTCCTATC AGGTTACAGA CCTGTTGGTA TCGTGGTGCC TTAGTTTTTG CTACAGCATT CTAACACTAA
TGAAAAATGT ACTTTCGAAT ATCTGTTTTG TCAATATAAG TAGACAAAGT ATGTCTTGCT GTAGTAATTT TGGGGTTTTC
TCATATAGTT GCTTTCAATA CATAAACTTT AATATTTTTA TTTATCTTGC AGGCTGATAA TTATGAAAAA ATATTTTCTC
ATATGAAACC AAATAGCATA CTTGGGCTTT CCCATGGTTT TCTTCTCGGG CATTTGCAGT CAATTGGACT TGACTTTCCA
CAGAACATTA GTGTAATTGC TGTGTGCCCA AAGGGGATGG GTCCATCTGT AAGGAGGCTC TATGTGCAAG GCAAAGAAAT
AAATGGTGCT GGAATTAATG CAAGTTTTGC CGTCCACCAG GTTACTTTTG CTCTACCTCA GTTTCTGTCT TCACTTCCTT
CGGGTCTTCT CATGTGTTGA TTGAATAGTT TATTTTATTT GAGTAACTAT TTGTGCATGC AGGATGTGGA TGGTAGGGCT
ACTGATGTTG CTTTGGGATG GTCTGTTGCC CTTGGTTCTC CATTCACTTT CGCCACTACA TTAGAGCAAG AGTACAAGAG
TGATATCTTT GGGGAGAGAG GTGAGAACTT TGCAACGTTT TGTTGTTTTT TCCTTGATGG CGTAAGTTCT AACTACAGCC
ATGGATGTTT GTAGGCATTT TACTTGGCGC TGTTCATGGA GTTGTGGAAT CCTTGTTTAG GAGATACACT GATAATGGAA
TGGACGAAGA TCTGGCGTAT AAGAATACTG TTGAGTCTAT AACTGGAATT ATATCTAAAA CCATCTCAAC CAAGGTTGTA
TTTTCACTAG TCTAGCATTA ATTTTTGTCT GTTGGACACC AACACCCTTT CCGAAAACCC TGTACAATGT GCTGGATTGG
GATTTCTCTG AGTTCTGACT AGCCTTTTGC GCGTATTGGT TTTGGACAGG GCATGCTAGC TGTATACAAT GCTTTATCTG
AAGATGAGAA AAGGGAATTT GAGAAAGCTT ACAGTGCTTC TTATTATCCT TGCATGGATA TTCTGTACGA GTGCTACGAG
GATGTAGCCA GTGGTAGTGA GATTCGCAGT GTTGTTCTGG CTGGACGCCG CTTTTATGTA AGGACATATA CTTTCCCCTT
TAGAGTAGTC AGCCTTTGCA CCACCGACTT TAAACAATAC ATGTTTTACA GGAGAAAGAG GGTCTACCTG CTTTCCCCAT
GGGTAACATT GATCAAACCC GCATGTGGAA GGTTGGTGAG CGTGTCCGTT CTACAAGACC AGCAGGTGAT CAAGGCCCGT
TATATCCTTT TACTGCTGGT GTCTTTGTGG CATTGATGAT GGCCCAGGTA CTCTTGGAAT TTTACTTGCT TTTATTTTGG
GAATGGATCC ACATAGTTTC CTGCCTGTAC ATTTGTCTCC GTTTGCTTTC AATTTTGTGC TTGTGACTGA TTAAGGGATG
TTTTTTTTCT GCGATAGATA TGTAGAGCAA AAATGAATTA TGTATTTACT CTGTGATTAT TAAATTTCTA GATTGAGATC
CTGAGGAAGA AAGGGCATTC CTACTCCGAA ATCATTAACG AGAGTGTCAT CGAGGCAGTT GATTCTTTGA ATCCATTCAT
GCATGCTCGT GGCGTTTCTT TCATGGTTGA TAACTGTTCA ACCACGGCTA GGTTGGGTTC GAGGAAATGG GCTCCACGAT
TTGATTACAT TCTTACCCAG CAGGCCTTGG TGGCGGTGGA CAATGGAACC CCTGTTAACC AGGACTTACT CAGCAACTTT
CTTTCGGACC CAGTGCATGG AGCCATTGAA GTCTGCGCCA AATTGAGACC CACAGTTGAC ATTTCTGTGC CAGCAGATGC
AGACTTCGTT CGTCCAGAGT TGCGCCACTC CAGCAATTAG AACAAATTAT GGCTTTTACC TGGAATCATT TTCCTATATG
CTCAGAACTG CAGTTTCTTG TTAGTTTGGG GTTTCTAGTT TTGTTTTTAT GAAAGAATGC TAGTATGTAA GTTGTATTAT
CATTTTGTAG TTTGTACCTC CTGTGTTTCT GCTACCGAGG AAGGAACTAT AGCTTAAGTA ATCTACGTCC ACAAATGCGA
CCCATGTCAA TTCAACTTTT CAATCATGTC CTCGCTAACC TTTCAATAAT TTCAGTACCG GCAATTTCTT TAAAGCAATT
CGAACCATTT TTAGTGCTCC TGGACAATGC TTGTCGACCA CCAAGCTTTG TCTGGAAAGC TTATGCCAAA TCGTTAAATA
ACCTAAAAAC AATGTAAATA TGAACTGACA TACATAGCTT TCATGCTATC AGTTTCCGTT TAAATATTTT TTATCATTTT
CCAGAAGCCC AATCTAGGGC GTTACTATGT GTC

>Vigan.07G104900.01
AAAATATTGG CAATGTGTGG CGTTAATCTC ACCTACTCGT GCACGCTTGC AGATATACAC GGGCGTACAA AAGAAGTGGA
GATTTCTCAC CGACACCGTA TGGGCGCACT TTAGCATACA CCACTCAATG CTCACAGTAT AAAACCCCCA ACAAATATAC
TGCCGCTTCA CTCATTGAAC CCTTCTCTTT ACACCCAAAC AGACACACTC TACTCCAAAT AATGGCGGCT GCGACGACGT
CGTGCTCTTC TGCAATCTCT GCCGCCTCTG AAACCCTTGC CAAACCTTCT TCCAGAAGCT TCTCTGCTAC CAGCCTCGCT
CTACAATCCT CTTCTTCCAA ACTCACCTTT AAATCCCTAA AGCTGAGCCG ATGCGGCGCC GCTCTCGGTG CTCGTATGGT
GGCGGCGCCG GCTGTGAAGG CTCCCACGCA GCTCGATTTC GACACGAAGG TTTTCAAGAA GGAGAAGGTT AACCTCGCCG
GACACGACGA GTACATCGTG AGAGGAGGCA GGGATTTGTT CCACTTTTTG CCCGACGCTT TCAAGGGGAT CAAGCAGATT
GGTGTCATTG GCTGGGGATC TCAGGGACCT GCCCAGGCTC AAAATCTTAG GGACTCGCTT GCTGAAGCAA AGTCCGATAT
TGTGGTCAAG ATTGGACTCA GGAAAGGTTC TCGTTCCTTT GCTGAAGCTC GGGCAGCCGG GTTTACTGAG GAGAATGGGA
CTCTTGGTGA CATATGGGAA ACTGTCTCGG GCAGTGATCT TGTGATGTTG TTAATTTCTG ATTCCGCACA GGCTGATAAT
TATGAAAAAA TATTTTCTCA TATGAAACCA AATAGCATAC TTGGGCTTTC CCATGGTTTT CTTCTCGGGC ATTTGCAGTC
AATTGGACTT GACTTTCCAC AGAACATTAG TGTAATTGCT GTGTGCCCAA AGGGGATGGG TCCATCTGTA AGGAGGCTCT
ATGTGCAAGG CAAAGAAATA AATGGTGCTG GAATTAATGC AAGTTTTGCC GTCCACCAGG ATGTGGATGG TAGGGCTACT
GATGTTGCTT TGGGATGGTC TGTTGCCCTT GGTTCTCCAT TCACTTTCGC CACTACATTA GAGCAAGAGT ACAAGAGTGA
TATCTTTGGG GAGAGAGGCA TTTTACTTGG CGCTGTTCAT GGAGTTGTGG AATCCTTGTT TAGGAGATAC ACTGATAATG
GAATGGACGA AGATCTGGCG TATAAGAATA CTGTTGAGTC TATAACTGGA ATTATATCTA AAACCATCTC AACCAAGGGC
ATGCTAGCTG TATACAATGC TTTATCTGAA GATGAGAAAA GGGAATTTGA GAAAGCTTAC AGTGCTTCTT ATTATCCTTG
CATGGATATT CTGTACGAGT GCTACGAGGA TGTAGCCAGT GGTAGTGAGA TTCGCAGTGT TGTTCTGGCT GGACGCCGCT
TTTATGAGAA AGAGGGTCTA CCTGCTTTCC CCATGGGTAA CATTGATCAA ACCCGCATGT GGAAGGTTGG TGAGCGTGTC
CGTTCTACAA GACCAGCAGG TGATCAAGGC CCGTTATATC CTTTTACTGC TGGTGTCTTT GTGGCATTGA TGATGGCCCA
GATTGAGATC CTGAGGAAGA AAGGGCATTC CTACTCCGAA ATCATTAACG AGAGTGTCAT CGAGGCAGTT GATTCTTTGA
ATCCATTCAT GCATGCTCGT GGCGTTTCTT TCATGGTTGA TAACTGTTCA ACCACGGCTA GGTTGGGTTC GAGGAAATGG
GCTCCACGAT TTGATTACAT TCTTACCCAG CAGGCCTTGG TGGCGGTGGA CAATGGAACC CCTGTTAACC AGGACTTACT
CAGCAACTTT CTTTCGGACC CAGTGCATGG AGCCATTGAA GTCTGCGCCA AATTGAGACC CACAGTTGAC ATTTCTGTGC
CAGCAGATGC AGACTTCGTT CGTCCAGAGT TGCGCCACTC CAGCAATTAG AACAAATTAT GGCTTTTACC TGGAATCATT
TTCCTATATG CTCAGAACTG CAGTTTCTTG TTAGTTTGGG GTTTCTAGTT TTGTTTTTAT GAAAGAATGC TAGTATGTAA
GTTGTATTAT CATTTTGTAG TTTGTACCTC CTGTGTTTCT GCTACCGAGG AAGGAACTAT AGCTTAAGTA ATCTACGTCC
ACAAATGCGA CCCATGTCAA TTCAACTTTT CAATCATGTC CTCGCTAACC TTTCAATAAT TTCAGTACCG GCAATTTCTT
TAAAGCAATT CGAACCATTT TTAGTGCTCC TGGACAATGC TTGTCGACCA CCAAGCTTTG TCTGGAAAGC TTATGCCAAA
TCGTTAAATA ACCTAAAAAC AATGTAAATA TGAACTGACA TACATAGCTT TCATGCTATC AGTTTCCGTT TAAATATTTT
TTATCATTTT CCAGAAGCCC AATCTAGGGC GTTACTATGT GTC

>Vigan.07G104900.01
ATGGCGGCTG CGACGACGTC GTGCTCTTCT GCAATCTCTG CCGCCTCTGA AACCCTTGCC AAACCTTCTT CCAGAAGCTT
CTCTGCTACC AGCCTCGCTC TACAATCCTC TTCTTCCAAA CTCACCTTTA AATCCCTAAA GCTGAGCCGA TGCGGCGCCG
CTCTCGGTGC TCGTATGGTG GCGGCGCCGG CTGTGAAGGC TCCCACGCAG CTCGATTTCG ACACGAAGGT TTTCAAGAAG
GAGAAGGTTA ACCTCGCCGG ACACGACGAG TACATCGTGA GAGGAGGCAG GGATTTGTTC CACTTTTTGC CCGACGCTTT
CAAGGGGATC AAGCAGATTG GTGTCATTGG CTGGGGATCT CAGGGACCTG CCCAGGCTCA AAATCTTAGG GACTCGCTTG
CTGAAGCAAA GTCCGATATT GTGGTCAAGA TTGGACTCAG GAAAGGTTCT CGTTCCTTTG CTGAAGCTCG GGCAGCCGGG
TTTACTGAGG AGAATGGGAC TCTTGGTGAC ATATGGGAAA CTGTCTCGGG CAGTGATCTT GTGATGTTGT TAATTTCTGA
TTCCGCACAG GCTGATAATT ATGAAAAAAT ATTTTCTCAT ATGAAACCAA ATAGCATACT TGGGCTTTCC CATGGTTTTC
TTCTCGGGCA TTTGCAGTCA ATTGGACTTG ACTTTCCACA GAACATTAGT GTAATTGCTG TGTGCCCAAA GGGGATGGGT
CCATCTGTAA GGAGGCTCTA TGTGCAAGGC AAAGAAATAA ATGGTGCTGG AATTAATGCA AGTTTTGCCG TCCACCAGGA
TGTGGATGGT AGGGCTACTG ATGTTGCTTT GGGATGGTCT GTTGCCCTTG GTTCTCCATT CACTTTCGCC ACTACATTAG
AGCAAGAGTA CAAGAGTGAT ATCTTTGGGG AGAGAGGCAT TTTACTTGGC GCTGTTCATG GAGTTGTGGA ATCCTTGTTT
AGGAGATACA CTGATAATGG AATGGACGAA GATCTGGCGT ATAAGAATAC TGTTGAGTCT ATAACTGGAA TTATATCTAA
AACCATCTCA ACCAAGGGCA TGCTAGCTGT ATACAATGCT TTATCTGAAG ATGAGAAAAG GGAATTTGAG AAAGCTTACA
GTGCTTCTTA TTATCCTTGC ATGGATATTC TGTACGAGTG CTACGAGGAT GTAGCCAGTG GTAGTGAGAT TCGCAGTGTT
GTTCTGGCTG GACGCCGCTT TTATGAGAAA GAGGGTCTAC CTGCTTTCCC CATGGGTAAC ATTGATCAAA CCCGCATGTG
GAAGGTTGGT GAGCGTGTCC GTTCTACAAG ACCAGCAGGT GATCAAGGCC CGTTATATCC TTTTACTGCT GGTGTCTTTG
TGGCATTGAT GATGGCCCAG ATTGAGATCC TGAGGAAGAA AGGGCATTCC TACTCCGAAA TCATTAACGA GAGTGTCATC
GAGGCAGTTG ATTCTTTGAA TCCATTCATG CATGCTCGTG GCGTTTCTTT CATGGTTGAT AACTGTTCAA CCACGGCTAG
GTTGGGTTCG AGGAAATGGG CTCCACGATT TGATTACATT CTTACCCAGC AGGCCTTGGT GGCGGTGGAC AATGGAACCC
CTGTTAACCA GGACTTACTC AGCAACTTTC TTTCGGACCC AGTGCATGGA GCCATTGAAG TCTGCGCCAA ATTGAGACCC
ACAGTTGACA TTTCTGTGCC AGCAGATGCA GACTTCGTTC GTCCAGAGTT GCGCCACTCC AGCAATTAG

>Vigan.07G104900.01
MAAATTSCSS AISAASETLA KPSSRSFSAT SLALQSSSSK LTFKSLKLSR CGAALGARMV AAPAVKAPTQ LDFDTKVFKK
EKVNLAGHDE YIVRGGRDLF HFLPDAFKGI KQIGVIGWGS QGPAQAQNLR DSLAEAKSDI VVKIGLRKGS RSFAEARAAG
FTEENGTLGD IWETVSGSDL VMLLISDSAQ ADNYEKIFSH MKPNSILGLS HGFLLGHLQS IGLDFPQNIS VIAVCPKGMG
PSVRRLYVQG KEINGAGINA SFAVHQDVDG RATDVALGWS VALGSPFTFA TTLEQEYKSD IFGERGILLG AVHGVVESLF
RRYTDNGMDE DLAYKNTVES ITGIISKTIS TKGMLAVYNA LSEDEKREFE KAYSASYYPC MDILYECYED VASGSEIRSV
VLAGRRFYEK EGLPAFPMGN IDQTRMWKVG ERVRSTRPAG DQGPLYPFTA GVFVALMMAQ IEILRKKGHS YSEIINESVI
EAVDSLNPFM HARGVSFMVD NCSTTARLGS RKWAPRFDYI LTQQALVAVD NGTPVNQDLL SNFLSDPVHG AIEVCAKLRP
TVDISVPADA DFVRPELRHS SN*