GBrowse Details

Vigan.07G102400.01

Basic Information:
Name: Vigan.07G102400.01
Multiple alignment
Variant Information
Position: Chr07:9078231..9082111 (+ strand)
Length: 3881
Functional Information:
Description: Similar to Uncharacterized protein. [C6TGZ0, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Basic-leucine zipper domain (IPR004827)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.41,7.89,5.58,0.28,0.27,5.02,5.14
Automatic updates:
Name: NM_001254639 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max transcription factor bZIP58 (BZIP58), mRNA.
PubMed ID: 18365246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr07:9078231..9078691 (+ strand)
Length: 461
Type: five_prime_UTR
Position: Chr07:9078692..9079290 (+ strand)
Length: 599
Type: CDS
Position: Chr07:9079856..9079946 (+ strand)
Length: 91
Type: CDS
Position: Chr07:9080287..9080413 (+ strand)
Length: 127
Type: CDS
Position: Chr07:9081141..9081292 (+ strand)
Length: 152
Type: CDS
Position: Chr07:9081293..9082111 (+ strand)
Length: 819
Type: three_prime_UTR

>Vigan.07G102400.01 class=Sequence position=Chr07:9078231..9082111 (+ strand)
CCAACCCCTC CTCCCAGCTG TTCATAGCTG TCCAATCCCT TCCCATCCCC ATGTGACCCC ACTGCACAAA CACATACATA
CAGATACCCC AGAGATTTTT TTCCGATTTT TAAACCCCAG AACAAAATAT AACTATTCTA AATTATACCT TTTTTTTTTT
AATTTTCAAA ACTTAAGAAA GTTCATGATT GTGTTGTTTT TTGTTCGTGT GCCTTTCTTA CCTCTAACAA CATTCCCCTG
TGCTTGCTGG GAACGTGCAT ATATATTTAT AAAAGAGATG TGTTAAAGCC TTGTTTCATT TCTTCTCTCT CTTCTTCTGC
TGCATGTCAT ATGCAATATA CAGATACAAT AATGTGCATA TTTTTCATAG GGACATGTAC AACTGCAACA ACATTAACAT
CCGAGGTTAA TCTGTGGTAA CACTTTCTTT CTGGTTTGGT GTGTGTGTGT GTGTGTTTCA AATGGCGCAA TTGCCTCCAA
AGATCCCAAA CCTGTCACCA GGTTGGCCGG ACTTCTCTTC TCAACACCAG AAGATGCCAT TGCCACCTCT TATCAACGAC
ACCACCACCA CCACCCATCA AAATCAAAAC CCTTCTTGGG TGGACGAGTT CCTCGACTTC TCCTCCGCCC GCCGCGGCGC
TCACAGGCGG TCGGTGAGCG ACTCCATCAC CTACTTGGAC GCACCGATGA GGTGTGGTGA GAACAACAAC CATAACAATA
GTAATGGCAA TGGCAATGAG TTTGACAGGT TTGATGATGA ACAATTCATG TCCATGTTCA CGGATGAAGT AGTGCTCTCT
GGGGTCCCCT TGCCACCACC GACTACCTTG TCCTCCTCTA ACCCTTCTAG CCCTTCCGAT CAGAACTTCT TCCATGATGA
GAAAGAGAGC AGCCGGAAGG AGAGGAAGCT GCAGAAGGAG GAAGAGGAGC ACCACCACCA ACTGAAAAAT GAAGCAGCTG
AGGTTGAAAG CCAATGCATG CAGGAAATTG CGCAGCCTCC AAATGACACC AATACTTCTT CTTCCAATGA GAGAATTAGT
GACCCCAAGA GAGTCAAAAG GTACGTCTAC TATACTCATT AACCATTCAT ATTTTTTCTT CCTCCAGTTT TAAACCATTA
CACAGAATTT CAGTCTGTTT TTCTCAGACA AATTTTGCTG AACTTCATGT TACCAGAATA ATTCTTCGAG TAATTAGTCT
TTCACCACCC AGATAGTAAT CAAACTTGTT CTCATCTCTC GTATTATTTT CCTCTTTATT GTACGACCAG TCATATCAAT
TATTTATTTC TTTTTTATTA TTTTCTTCTG GAGTTTCTAA AGAGATGTCT ACCAATTTTT TTCTTGGAAG AAAGCGGTGA
ATGTCCATTC TAATTTTGAG GTGGATAGGT GAAGGAAGAA GAAAAAAAAA TATAATGAAA AAATAAAAGA TATAGGAAAA
ACATTAAAGA AAAAGTGGAT AAATGATCTT ATACTTGAGA ATTGATTCGC AAAATTAAGC GGTGTTTTTT TCTTTTCCAT
TGGCTTCTGT AAAATGTTTC GTTCTTTTTG GGAAACTGAA AATGAACCAT GAATTAGAAT TTTTGTATTT TTGGAGTTCT
GTTTCTAATT GTCGTCTTGC ATCAGAATCT TGGCTAATAG ACAATCTGCA CAAAGATCGC GAGTGAGGAA GCTGCAATAC
ATATCAGAGC TTGAGAGAAG TGCAACTTCA TTACAGGTTT GCGACGTAAC GTGATGTGAC TACAATAAAT CTTTGCTTGG
TGCTGATAAA AAAATCTTTG CCTTTATTAA AAAAATCTTT GTTTTTTTCC TTAGAGCCAC AATAAATACT TTTTTTTAAA
GTTAATTTTT ATATGCCATA ATAATAAATA ACATAATTTT TCTTCAATAT TTTTATATTC AAAATTCACT TTTTTTCTTA
ATTGTTTTCA TCACCTACCA CTTATTTTAT TTCACATTTT TCTATTGTTA TGAGAAGCAT TTTTTAATAC GTGTGGTTGA
AATAGCATTC ACGAAGATAA AATATTGACC CTTTCCCAAT CCGTTGACAA ATGAAGGCTG AAGTTTCAGT GCTGTCTCCA
AGGGTTGCAT TTTTGGATCA CCAACGTTTG CTTCTAAATG TGGACAATAG TGCTCTCAAG CAAAGGATCG CTGCCCTTGC
TCAAGACAAG ATCTTTAAAG ATGGTAATTA CTTTTCTTTA ATTAAAAGTC TAATTTTTAT TATGGATGAC ATAACTAACA
ACCCTGTTAA GATGAGGTTG ATGGAAGCAT TAATTAGTAC TTTATGGCAT TTAGAATCCA TGCTATTTGT CTGATCCAAT
GTGCTCTCCA TTTACTTTTT CCATGTAAGT GAAATAAAAA TTCCTCATAG TTTGGAAAAG TGTATTTGTC CACAAGAAGC
TCATTTTGCC AAGTGAACCT AACCTCGTGG CTTTACTTGT CTTGATACTT GCTTCATGCA TGTGATCTTA TTTTCTCTCT
CTTTTCTCTC AAAACTCTAT TTAATACCAA GAGAGAGAAA CAGAGAAATG TGGTTTAAAG AGAAACAGTA CCATCACTGG
TAAACTGCAG TTCTGGTTTC TGAAAACATA TTTTGTTATC AAATTGGTTC GAGAAACATG GAAGTTAATA TGAACTTACT
GTATAACTTT GTGTTTGTTT TAAAACCAAG AGGAAAAGAA AAAACATTTG TTTTAAGAAT GTAACGGAAA GAGAGAGAGA
GAGAGAGTGG TAATTATTTT ATTAACGTAG TTGCGAGAAA AAGACCAATT ATGAAAGTGC AAGAGTTATA TTGATTTTAG
CGAAAGCTTT TCGTGTGCAC GCGTATTTAA GTCTGTGTCC GATCATGTGT GATGTCTCCA AGTAGTTAAA ATTGTTTAAC
TGATTAATGA TAGAAATGAT ACAAATGCAG CTCATCAAGA GGCACTGAAG AGGGAGATAG AAAGACTGAG GCAAGTTTAT
CAGCAGCAGA GGCTGAAGAA GATGGAAAAT GCAGCAGAAT CAGGTCCATT ACCATTATGT GATGTTCAAA GAGAAAAGGA
AGTACAACTT CTGAACGTTT GAAGAAGATT TATGAGATGA GAGTGTGGTT GTTTACATAA AGAGAGAGAT GCATGGGAGA
AAGGAAAGGT TAAATTTTTG TTGTGCATTG AGTATTTTGA TTAGAGAATT GATGAAGTTT GAGTGAGTGA GTGAGTGAAT
GAGTGGTGGT AGGCTTCTGG TGTGAAACAG CGCAGGCACG TGATGTGTTT ACTTTAAAAG GAGGGGACCA CTGAAAGCTT
GCATGATTAG AATGCAGGGG ATCCACATGT GCAGCAGTGG CATCAAAAGA GAGGGTGGAA GAAACAGTTG TGTCTGTCTG
CTTTAACTTG ATAGATAGGA GTGTGGTATA TCTTCATCAT TCCTTTCACT TCTTTATTTC TTCTCTATCA TTCTTTTCTA
TTTTCCTTCT TCTTTTTCGA TGCATCTTCC AAAACAAACA CAACTGCCCA TGGATCATGC ATCAAATTAA TCAACCTGTA
TATCTCTGTC ATGGCTTTTC TGCTTTGCCT CTCTACTTTC TGTTATCTTA TCTTTTTTAT TATTTCACTT AATTATTTTC
TGAACCCAAA ATGTAAATAC TCACTTCACA CAATCTTCCA TGTATATATA TAATAGTAGT TTTTCTGCTT TCACTGTTTC
ACAACTTTCT GTGTTATGAA ATTGAATTAC GTCACACCTA TGCCAAAATG GTAAAAGATT GTGAGTGAAA TTGCATTGGA
GAAAGTGCAT GTATGTTATC TCAATCTCAT CTCACAATGT TTTTTTATCC ATTTCTTATT CTCTTTTTCT ATATTTGCAA
AGCTATACCT TTTTTCCTTT TCTTTTGTAC TTTGTTTGTC A

>Vigan.07G102400.01
CCAACCCCTC CTCCCAGCTG TTCATAGCTG TCCAATCCCT TCCCATCCCC ATGTGACCCC ACTGCACAAA CACATACATA
CAGATACCCC AGAGATTTTT TTCCGATTTT TAAACCCCAG AACAAAATAT AACTATTCTA AATTATACCT TTTTTTTTTT
AATTTTCAAA ACTTAAGAAA GTTCATGATT GTGTTGTTTT TTGTTCGTGT GCCTTTCTTA CCTCTAACAA CATTCCCCTG
TGCTTGCTGG GAACGTGCAT ATATATTTAT AAAAGAGATG TGTTAAAGCC TTGTTTCATT TCTTCTCTCT CTTCTTCTGC
TGCATGTCAT ATGCAATATA CAGATACAAT AATGTGCATA TTTTTCATAG GGACATGTAC AACTGCAACA ACATTAACAT
CCGAGGTTAA TCTGTGGTAA CACTTTCTTT CTGGTTTGGT GTGTGTGTGT GTGTGTTTCA AATGGCGCAA TTGCCTCCAA
AGATCCCAAA CCTGTCACCA GGTTGGCCGG ACTTCTCTTC TCAACACCAG AAGATGCCAT TGCCACCTCT TATCAACGAC
ACCACCACCA CCACCCATCA AAATCAAAAC CCTTCTTGGG TGGACGAGTT CCTCGACTTC TCCTCCGCCC GCCGCGGCGC
TCACAGGCGG TCGGTGAGCG ACTCCATCAC CTACTTGGAC GCACCGATGA GGTGTGGTGA GAACAACAAC CATAACAATA
GTAATGGCAA TGGCAATGAG TTTGACAGGT TTGATGATGA ACAATTCATG TCCATGTTCA CGGATGAAGT AGTGCTCTCT
GGGGTCCCCT TGCCACCACC GACTACCTTG TCCTCCTCTA ACCCTTCTAG CCCTTCCGAT CAGAACTTCT TCCATGATGA
GAAAGAGAGC AGCCGGAAGG AGAGGAAGCT GCAGAAGGAG GAAGAGGAGC ACCACCACCA ACTGAAAAAT GAAGCAGCTG
AGGTTGAAAG CCAATGCATG CAGGAAATTG CGCAGCCTCC AAATGACACC AATACTTCTT CTTCCAATGA GAGAATTAGT
GACCCCAAGA GAGTCAAAAG AATCTTGGCT AATAGACAAT CTGCACAAAG ATCGCGAGTG AGGAAGCTGC AATACATATC
AGAGCTTGAG AGAAGTGCAA CTTCATTACA GGCTGAAGTT TCAGTGCTGT CTCCAAGGGT TGCATTTTTG GATCACCAAC
GTTTGCTTCT AAATGTGGAC AATAGTGCTC TCAAGCAAAG GATCGCTGCC CTTGCTCAAG ACAAGATCTT TAAAGATGCT
CATCAAGAGG CACTGAAGAG GGAGATAGAA AGACTGAGGC AAGTTTATCA GCAGCAGAGG CTGAAGAAGA TGGAAAATGC
AGCAGAATCA GGTCCATTAC CATTATGTGA TGTTCAAAGA GAAAAGGAAG TACAACTTCT GAACGTTTGA AGAAGATTTA
TGAGATGAGA GTGTGGTTGT TTACATAAAG AGAGAGATGC ATGGGAGAAA GGAAAGGTTA AATTTTTGTT GTGCATTGAG
TATTTTGATT AGAGAATTGA TGAAGTTTGA GTGAGTGAGT GAGTGAATGA GTGGTGGTAG GCTTCTGGTG TGAAACAGCG
CAGGCACGTG ATGTGTTTAC TTTAAAAGGA GGGGACCACT GAAAGCTTGC ATGATTAGAA TGCAGGGGAT CCACATGTGC
AGCAGTGGCA TCAAAAGAGA GGGTGGAAGA AACAGTTGTG TCTGTCTGCT TTAACTTGAT AGATAGGAGT GTGGTATATC
TTCATCATTC CTTTCACTTC TTTATTTCTT CTCTATCATT CTTTTCTATT TTCCTTCTTC TTTTTCGATG CATCTTCCAA
AACAAACACA ACTGCCCATG GATCATGCAT CAAATTAATC AACCTGTATA TCTCTGTCAT GGCTTTTCTG CTTTGCCTCT
CTACTTTCTG TTATCTTATC TTTTTTATTA TTTCACTTAA TTATTTTCTG AACCCAAAAT GTAAATACTC ACTTCACACA
ATCTTCCATG TATATATATA ATAGTAGTTT TTCTGCTTTC ACTGTTTCAC AACTTTCTGT GTTATGAAAT TGAATTACGT
CACACCTATG CCAAAATGGT AAAAGATTGT GAGTGAAATT GCATTGGAGA AAGTGCATGT ATGTTATCTC AATCTCATCT
CACAATGTTT TTTTATCCAT TTCTTATTCT CTTTTTCTAT ATTTGCAAAG CTATACCTTT TTTCCTTTTC TTTTGTACTT
TGTTTGTCA

>Vigan.07G102400.01
ATGGCGCAAT TGCCTCCAAA GATCCCAAAC CTGTCACCAG GTTGGCCGGA CTTCTCTTCT CAACACCAGA AGATGCCATT
GCCACCTCTT ATCAACGACA CCACCACCAC CACCCATCAA AATCAAAACC CTTCTTGGGT GGACGAGTTC CTCGACTTCT
CCTCCGCCCG CCGCGGCGCT CACAGGCGGT CGGTGAGCGA CTCCATCACC TACTTGGACG CACCGATGAG GTGTGGTGAG
AACAACAACC ATAACAATAG TAATGGCAAT GGCAATGAGT TTGACAGGTT TGATGATGAA CAATTCATGT CCATGTTCAC
GGATGAAGTA GTGCTCTCTG GGGTCCCCTT GCCACCACCG ACTACCTTGT CCTCCTCTAA CCCTTCTAGC CCTTCCGATC
AGAACTTCTT CCATGATGAG AAAGAGAGCA GCCGGAAGGA GAGGAAGCTG CAGAAGGAGG AAGAGGAGCA CCACCACCAA
CTGAAAAATG AAGCAGCTGA GGTTGAAAGC CAATGCATGC AGGAAATTGC GCAGCCTCCA AATGACACCA ATACTTCTTC
TTCCAATGAG AGAATTAGTG ACCCCAAGAG AGTCAAAAGA ATCTTGGCTA ATAGACAATC TGCACAAAGA TCGCGAGTGA
GGAAGCTGCA ATACATATCA GAGCTTGAGA GAAGTGCAAC TTCATTACAG GCTGAAGTTT CAGTGCTGTC TCCAAGGGTT
GCATTTTTGG ATCACCAACG TTTGCTTCTA AATGTGGACA ATAGTGCTCT CAAGCAAAGG ATCGCTGCCC TTGCTCAAGA
CAAGATCTTT AAAGATGCTC ATCAAGAGGC ACTGAAGAGG GAGATAGAAA GACTGAGGCA AGTTTATCAG CAGCAGAGGC
TGAAGAAGAT GGAAAATGCA GCAGAATCAG GTCCATTACC ATTATGTGAT GTTCAAAGAG AAAAGGAAGT ACAACTTCTG
AACGTTTGA

>Vigan.07G102400.01
MAQLPPKIPN LSPGWPDFSS QHQKMPLPPL INDTTTTTHQ NQNPSWVDEF LDFSSARRGA HRRSVSDSIT YLDAPMRCGE
NNNHNNSNGN GNEFDRFDDE QFMSMFTDEV VLSGVPLPPP TTLSSSNPSS PSDQNFFHDE KESSRKERKL QKEEEEHHHQ
LKNEAAEVES QCMQEIAQPP NDTNTSSSNE RISDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSATSLQ AEVSVLSPRV
AFLDHQRLLL NVDNSALKQR IAALAQDKIF KDAHQEALKR EIERLRQVYQ QQRLKKMENA AESGPLPLCD VQREKEVQLL
NV*