GBrowse Details

Vigan.07G096700.01

Basic Information:
Name: Vigan.07G096700.01
Multiple alignment
Variant Information
Position: Chr07:8402552..8405590 (- strand)
Length: 3039
Functional Information:
Description: Similar to Uncharacterized protein. [H9TN50, Glycine max]
GO: Biological Process: sexual reproduction (GO:0019953)
Cellular Component: extracellular region (GO:0005576)
InterPro: Major pollen allergen Lol pI (IPR005795)
Expansin/pollen allergen, DPBB domain (IPR007112)
Expansin, cellulose-binding-like domain (IPR007117)
Expansin/Lol pI (IPR007118)
RlpA-like double-psi beta-barrel domain (IPR009009)
Barwin-like endoglucanase (IPR014733)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,2.54,3.85,0.56,5.67,0.39,6.09
Automatic updates:
Name: NM_001261431 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max expansin-B3-like (EXPB8), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:8402552..8402938 (- strand)
Length: 387
Type: three_prime_UTR
Position: Chr07:8402939..8403133 (- strand)
Length: 195
Type: CDS
Position: Chr07:8404020..8404149 (- strand)
Length: 130
Type: CDS
Position: Chr07:8404810..8405110 (- strand)
Length: 301
Type: CDS
Position: Chr07:8405278..8405428 (- strand)
Length: 151
Type: CDS
Position: Chr07:8405429..8405590 (- strand)
Length: 162
Type: five_prime_UTR

>Vigan.07G096700.01 class=Sequence position=Chr07:8402552..8405590 (- strand)
ATACAACCAA AGCAAAAAAA AAAACTCCGC CGCCACCAAT CAATAACTGT CGGCAACACA GCAATCCCAC TTTTCCATTA
ACTGCTTTTT CGTGCTCCGA GCTCGCCGGA GCCGACATTC GCAGCGGCGC GTTACCCCAT TTTCTTATTC TCTCAAAACA
AAATGCAGCG CCACCGTGTC TCCGCCGTGT TTATTCTAAG CCTGTGCTTT AACATTGCGC TAGGACAGAC TCCTACTCAC
AGTGTCCTGG ACCAACATTG GTACCCGGGA ACCGCCACGT GGTACGGCGA ACCCGAGGGC GACGGTAGCA CCGGTAAGGA
CTAAAACTGA GTCGAGATGT TGACTCAACA ATGCAAAGTG GAAATGAACC TTATAAGTTT GATAATTAAC ATGATTAACT
GGCTTTCTAA CACGTTTTAA GATGAGTTTT GTTGGGTGAT AGTGAATGAG GAACTGAATT TGATGAATTG ATTGGATCAG
GAGGAGCATG TGGGTATGGT ACATTGGTGG ACGTGAAGCC GTTGAAGGCA AGGGTGGGTG CAGTGGGGTC AGTGTTGTTC
AAGAAAGGAG AAGGATGCGG GGCTTGTTAT AAGGTGAAGT GTTTGGACCA TAGCATATGT TCCAAGCGGG CAGTGACGGT
TATAGTAACA GATGAGTGCC CGGGCTGCCC GTCTGACCGA ACGCACTTCG ACCTCAGTGG CTCCGCCTTC GGCCGCATGG
CGTTTGCCGG TGAAAACGGT CAGCTCCGCA ACCGTGGGGA AATCCCAGTC ATTTACCGAA GGTATGGATC ACATTTACAG
TCACATTTAC ACATACCATT TTATGTTTTT TTTTTCTTAA TCTTGTTGGA CTAGAATACT ATGATAGATA GAGCAGTTGA
ATGAACATTC TTGGGTGAAA CTGAGTGTGA AATGTGAAGT AGAATTTCAA CGAAAATATC ATGAGTTTTA GTCAATCTTT
GCCGTGGAAG TGTTCAACTT GGTACAAAAA AGATAAAACC GTAATAATGT TGAGAAAGGA CTACCTCCTT TTGTCTTTTG
GTTCTGTTTT TAGTTTTTGA CAGTGACATC GGGTTAAGTG AATTGTGATA TGTAAAAAGA TTTTTTGACA AGAAAAAAGA
AAAAGAAAGG ATAATGTTAA AGTGTGTAAA AATTTGTTAA CACAGTAATT CATCTATAAA GAACTAAAGT GATGACATTA
TAAAGAAAAT CGTTGAGATT TTTCAATTGA GAATTTCTCT TACACAGTGA AGAATTTGCA GACTTTTTGG TATTTGCTGG
TGAGCATTGA CTATTCTCTT GCTACTTCTT TTCATGTCCT ATATTTTTAG AAGATGTTTT GAAAAACGAC GTTGAAACTA
CCCTTTTGTT CTGTGGATTA AAAAGGGAAA ATTTATAGTG ATAATGACCT TTGTCCTGAT TTGTTATTAT ATTTTCGGCA
GAACACCATG CAAGTATGCT GGGAAAAACA TCGCCTTCCA TGTCAATGAA GGTTCCACAC CTTTCTGGCT ATCACTTCTT
GTGGAGTTTG AAGATGGAGA TGGTGACATC GGCTCCATGT ATATACAAGA GGTACACTTC TTTCATCTTT CTTCCCCGCA
TTCCTTAACA AGCATCCACG AATAATTATA TCTAACTCTG AGTATATATA TGTATAGAGA GAGACATGTA TAAGAGTGAG
AGAAAAAGAA ACCTTGAAAT TCTGGTGTCC AGAAAATCAT ATATACAGCC ACTTTATAGT AGCATCTTAC ATATCAATAA
GAACATAACG AGATGCTCTA TATATTTCAG TAATTCATAG CTAGAAAGTA CAAATATTCG ATTTAATTAA TCTAGTACTA
ATGCATTGCA TATGGGTCCA AGGAATTTTC ATACCATCAA ACTGATGAGC TGTTAAATTA CCCGTGGACT TCCAAGTTTA
ATTTTTTTTT TAAAAGAGTG GAAAAATTTG TATGTCTAAA AGAAAATAAT AGCAAAAAGC ATAGACAACA AGGACATGAT
TGAGTGGAGA ATTCCACTTC CAAGTGTTGT GGGACGATCT TTTAGATCAC GTGGCGAAGC TATGCAGTTC CACCTTTTGT
ACTTTAGATT GGAATCATTG TATGATCTGC TAAAGTTGCT GTAATCCAAT TCTACCCAAT TAAAAATACC ATATATCCAG
AGTGTTATCT TCACATAATG TGGACCATTG GCACACAATG TCTCTCTTGT GTACCTTCTA TCTGTATCTT TTGAACCAGA
AGCATGTGAC AGGGGACCTC TAAAAAAATT CCTTTTTTTC CATTTCTCCC CCACAATAAA GAATATCTGC TGAGTAGGTC
ACAGGTGCAT GTGTCAGATG AACCCCTAAC CTGCATATTA TTCTTATGGT ACTTTGGCAA CATGCAGAAT AGTAAATATT
TTTTCTTTTG ATCTGGGTGT TAAATTTTTG TGATTGTTGA GTATTTTATG ATGGCAGGGA GGGTCAAGTG AGTGGGTGCA
GATGAGTCAT GTTTGGGGTG CAAATTGGTG CATTGTAAGA GGGCCTTTGA GAGGACCTTT TTCTGTTAAA GTAAGCACTT
CCACAGGGAA AAGCCTCACT GCCAAAGATG TTATTCCAAG CAATTGGACT CCCAAAGCAA CTTATACATC ACGCTTGAAT
TTCCTTTCTT AAACCATTTC CAAGCCTCAG GGAAGCACTT TTTACCTTTG CTCAAATTCC ACTTGGAAGA TACAGTTCTT
GGCCTTAGTG TCTTTATGTT TTTAAATAAG AAACAAAAGT AGAAGTTGAG TGCACAAGGT TATTCAATGG TGTTTTTGTT
TCTTAATTTT ACTTCTTTTT TTGCATTTGT ATACCTGTAA CTTTGTCATT TCTGTGGTGT GCAACTGTTT GTATTTTGTA
TTCAAAGTGA TGGGGTTGCC CTCTCCAAAT TGGAGGGAGA GCTTGTAGTG GTAGTGTAGT ATATATTTAG TAAAATGTGT
GTATTATTCC AATGTACTTT AAATGATGAA TGTATAAGTT TTAGAACCAG AGATGATAGA TTACTATATT TTATTTTCA

>Vigan.07G096700.01
ATACAACCAA AGCAAAAAAA AAAACTCCGC CGCCACCAAT CAATAACTGT CGGCAACACA GCAATCCCAC TTTTCCATTA
ACTGCTTTTT CGTGCTCCGA GCTCGCCGGA GCCGACATTC GCAGCGGCGC GTTACCCCAT TTTCTTATTC TCTCAAAACA
AAATGCAGCG CCACCGTGTC TCCGCCGTGT TTATTCTAAG CCTGTGCTTT AACATTGCGC TAGGACAGAC TCCTACTCAC
AGTGTCCTGG ACCAACATTG GTACCCGGGA ACCGCCACGT GGTACGGCGA ACCCGAGGGC GACGGTAGCA CCGGAGGAGC
ATGTGGGTAT GGTACATTGG TGGACGTGAA GCCGTTGAAG GCAAGGGTGG GTGCAGTGGG GTCAGTGTTG TTCAAGAAAG
GAGAAGGATG CGGGGCTTGT TATAAGGTGA AGTGTTTGGA CCATAGCATA TGTTCCAAGC GGGCAGTGAC GGTTATAGTA
ACAGATGAGT GCCCGGGCTG CCCGTCTGAC CGAACGCACT TCGACCTCAG TGGCTCCGCC TTCGGCCGCA TGGCGTTTGC
CGGTGAAAAC GGTCAGCTCC GCAACCGTGG GGAAATCCCA GTCATTTACC GAAGAACACC ATGCAAGTAT GCTGGGAAAA
ACATCGCCTT CCATGTCAAT GAAGGTTCCA CACCTTTCTG GCTATCACTT CTTGTGGAGT TTGAAGATGG AGATGGTGAC
ATCGGCTCCA TGTATATACA AGAGGGAGGG TCAAGTGAGT GGGTGCAGAT GAGTCATGTT TGGGGTGCAA ATTGGTGCAT
TGTAAGAGGG CCTTTGAGAG GACCTTTTTC TGTTAAAGTA AGCACTTCCA CAGGGAAAAG CCTCACTGCC AAAGATGTTA
TTCCAAGCAA TTGGACTCCC AAAGCAACTT ATACATCACG CTTGAATTTC CTTTCTTAAA CCATTTCCAA GCCTCAGGGA
AGCACTTTTT ACCTTTGCTC AAATTCCACT TGGAAGATAC AGTTCTTGGC CTTAGTGTCT TTATGTTTTT AAATAAGAAA
CAAAAGTAGA AGTTGAGTGC ACAAGGTTAT TCAATGGTGT TTTTGTTTCT TAATTTTACT TCTTTTTTTG CATTTGTATA
CCTGTAACTT TGTCATTTCT GTGGTGTGCA ACTGTTTGTA TTTTGTATTC AAAGTGATGG GGTTGCCCTC TCCAAATTGG
AGGGAGAGCT TGTAGTGGTA GTGTAGTATA TATTTAGTAA AATGTGTGTA TTATTCCAAT GTACTTTAAA TGATGAATGT
ATAAGTTTTA GAACCAGAGA TGATAGATTA CTATATTTTA TTTTCA

>Vigan.07G096700.01
ATGCAGCGCC ACCGTGTCTC CGCCGTGTTT ATTCTAAGCC TGTGCTTTAA CATTGCGCTA GGACAGACTC CTACTCACAG
TGTCCTGGAC CAACATTGGT ACCCGGGAAC CGCCACGTGG TACGGCGAAC CCGAGGGCGA CGGTAGCACC GGAGGAGCAT
GTGGGTATGG TACATTGGTG GACGTGAAGC CGTTGAAGGC AAGGGTGGGT GCAGTGGGGT CAGTGTTGTT CAAGAAAGGA
GAAGGATGCG GGGCTTGTTA TAAGGTGAAG TGTTTGGACC ATAGCATATG TTCCAAGCGG GCAGTGACGG TTATAGTAAC
AGATGAGTGC CCGGGCTGCC CGTCTGACCG AACGCACTTC GACCTCAGTG GCTCCGCCTT CGGCCGCATG GCGTTTGCCG
GTGAAAACGG TCAGCTCCGC AACCGTGGGG AAATCCCAGT CATTTACCGA AGAACACCAT GCAAGTATGC TGGGAAAAAC
ATCGCCTTCC ATGTCAATGA AGGTTCCACA CCTTTCTGGC TATCACTTCT TGTGGAGTTT GAAGATGGAG ATGGTGACAT
CGGCTCCATG TATATACAAG AGGGAGGGTC AAGTGAGTGG GTGCAGATGA GTCATGTTTG GGGTGCAAAT TGGTGCATTG
TAAGAGGGCC TTTGAGAGGA CCTTTTTCTG TTAAAGTAAG CACTTCCACA GGGAAAAGCC TCACTGCCAA AGATGTTATT
CCAAGCAATT GGACTCCCAA AGCAACTTAT ACATCACGCT TGAATTTCCT TTCTTAA

>Vigan.07G096700.01
MQRHRVSAVF ILSLCFNIAL GQTPTHSVLD QHWYPGTATW YGEPEGDGST GGACGYGTLV DVKPLKARVG AVGSVLFKKG
EGCGACYKVK CLDHSICSKR AVTVIVTDEC PGCPSDRTHF DLSGSAFGRM AFAGENGQLR NRGEIPVIYR RTPCKYAGKN
IAFHVNEGST PFWLSLLVEF EDGDGDIGSM YIQEGGSSEW VQMSHVWGAN WCIVRGPLRG PFSVKVSTST GKSLTAKDVI
PSNWTPKATY TSRLNFLS*