GBrowse Details

Vigan.07G082100.01

Basic Information:
Name: Vigan.07G082100.01
Multiple alignment
Variant Information
Position: Chr07:6785780..6789015 (+ strand)
Length: 3236
Functional Information:
Description: Similar to Membrane protein, putative. [G7IRI8, Medicago truncatula]
InterPro: Acid phosphatase/vanadium-dependent haloperoxidase-related (IPR003832)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:106.97,60.61,31.09,34.88,34.43,60.23,98.11,37.90
Arabidopsis thaliana homolog: AT3G21610.1
Automatic updates:
Name: NM_001251170 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306390 (LOC100306390), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:6785780..6785994 (+ strand)
Length: 215
Type: five_prime_UTR
Position: Chr07:6785995..6786140 (+ strand)
Length: 146
Type: CDS
Position: Chr07:6787069..6787225 (+ strand)
Length: 157
Type: CDS
Position: Chr07:6787931..6787981 (+ strand)
Length: 51
Type: CDS
Position: Chr07:6788087..6788179 (+ strand)
Length: 93
Type: CDS
Position: Chr07:6788488..6788547 (+ strand)
Length: 60
Type: CDS
Position: Chr07:6788548..6789015 (+ strand)
Length: 468
Type: three_prime_UTR

>Vigan.07G082100.01 class=Sequence position=Chr07:6785780..6789015 (+ strand)
GGGGAAAAAT GCATTTATTT TATTGAATCT CCAATGTGCA CTTTGATTTA ATTTATGAGT TGCAGTGGGA CATATAAAAT
GGGAGAATAT TAATTCCAAC AGGCTTTTTT GTCACTATAG AGTGAGGTAT CAGCAGAGAC GCGCGAGGGG AAGGTGGAGT
GCGGGTGAGG GTAAGCGTTC CGTTAGTTAC GTTAAGGTGT TATCGAGTTT GGTACATGGA CGAAGTGATG ACCATGGCGG
ATGTCGCAGC CAACACGCAA GGATCAACCA CCGCCTCTTC TTCCCTCCCT TCCAATTTCC CTCTCATCTC CGCCTTCCTC
TCCTTTGCCC TCGCACAGTT CCTCAAGATC TTCACCACCT GGTGCGTTCC TCCGTTTCTT ACACTTCCAC CAACGCGTAA
CGTTTCTTCT CTCTTTTTCT CTCGCGCGGT TAAGTCAAAC TCGATTATCT GCTTTACCGC TGTTATTTTC CTCGTCCGTT
AGATCAGAGC GTTGTGATAA CAAAAGCGCG CGTGCTTGCG TGTTTTAATA GGATCCAGCA TGTTACTCGC TGTTTTATGC
CTGCCTTGCT AATATCTGTG TTTTCATCGA TAATTCGTGT ATCGGTGTTG TGTATTTGGG TAAGGATTTG TTGAGATTTG
AGTTTTAGGG TTTGGAGTTA AAGTACTTTC CATACTTTTG TTCTATGCTC TGTATAGTGG AGTGTTGGGG ATGAATCAAT
CCGTTGGGAG TTATGATCTC TGTGTGCCTA CAGATATGCT TTTCTTAGCA TTTTTTTTCT TATCTGAGAA ATTGAATATT
TTATTTTGTA TTGTAGGGAT TGGATTCTGA AGCGCTGTTT GGTTTATTTT TTTTTATATA AGTACTAATT GGAGAAGAAA
ATGCAATAAG GTTCTCTCAA GTAATAAAAA TTAGCTTAAT GAATAAGTTA AAATCAGTTT TCTGAAGAAG CTAAGGAGTA
AACTTTTCTG AAAAACATAA TTTATGCATA AGTCCATTTT ATTTTATGAT AGAACTTTAT TTAATTTTAT CTTACCAGAA
AACATAAGAA AATGAGTAGA AAATAGTGTT TAAGCTACTA GCGCGAAATG AAATGAGAAT CATATCTAGT TAAAGTTGTG
TGCACGTGTT TGCTGACATC TCGTAAATTT TTGGACGTTT GGCTACACTG TACTGTGTCT TTTTTTTTTC TTTAGAACTG
GATTTTGGAT TTTTTTTCTT TGATCTGAAT TGTATGAGAT TGGAAATATG AGCTCAAATT TTTGCAAAAC TTTTCTCCTA
GATATTCAGG TATAAGGAAA AGCGATGGGA TTCTAAAAGG ATGCTTGATT CGGGTGGAAT GCCTTCGTCA CATTCTGCAA
CGGTGTCAGC TCTGGCTGTT GCTATAGGTC TCCAAGAAGG GGCAGGGTCA TCTGCTTTTG CTGTTGCCGT GGTCTTGGCA
TGTATTGTAT GTATGCTGTA TTGTCTTGTT TGTATTCAAA TATTTTTTAT TTTTCATTTT TTTTGGTGAT GACATGTCTG
GAAATATGTC CATATTTTAC TCTTCTTTCT TGTTTTTAGT CTGAATAAGT TTTATTAATT AATTATTAAC TATGATTTAA
TGTATTAAGA AACCATAGTA TGTTGCAGCA TTCGGAACAA AATTTATAGT AGCCTACATA AATTGGGATT TAGAAGAGAA
AAAAAGGGTT CATTTGGTAT GAATATCTAC CTTTTGAGTC GTCTGTTGTC CCAAATACAA ATTATTCCAC ATGTTCTGAA
AAACAACCCC ACTTGTAGAT TTACTTATCA CTTTCATTGT TATGATGCTT CCATTGGTGG AGCATTAAAG AATACATCGT
ATATGTTTGG AATTTACTAT GAGATCGATT TAATCTCATA ATGTTATTAG TTCTTATGTT AGTAACGTAT TCTTATATCA
TGTAAAATAC GTTTACCGAG GAGGATTCTG TAATATGCTG ATTGTTATTT CCATCATAAT TCTTTCACTA AAAGAAGGAG
TGTTTTGACC ACTTTCCCGT GCTTCCTTAT CTTCGGTATT ATAATTTGTT CAAGATGATT ATTATCCGAG CTTGGAAATG
CAAGTGTCTT TGCTGGTCCC GGTCTTTACT ACAGTCGAGT GGGATGATTA AGTTTTGGGT AACATTTGTA GGTTATGTAT
GATGCGTCAG GAGTTAGACT TCATGCAGGT CGGCAAGCAG AAGTAAGTTT TTATACATGA TACTAGTGTT TTTCTCTTGC
TTTACACTTT GCCATTAGTT TATATATACA TGTACATTTA ATACGTTGCT TCTGTGACGT ACCGCAGTTG CTTAATCAAA
TTGTGTGCGA ACTACCTCCT GAACATCCTT TGTCGAATGT CAGACCGCTG CGTGATTCAC TTGGTCATAC TCCATTTCAG
GTGCGTTGGG CTTTTTCCCT TGCTTAAGGA GCTTACTTGT TATGATTGAT GTAAACTCTT TACTCCTCTG TTTGCTAGCC
AGCAATTTCC TTCAATGTTC ATTCACAAGT ATATATGTTG TCGTTGATTG AGTATTTATG ACCAATACCA TGGCCAAGAA
CCGCATATAG CCATCCGTAC CTTTCATAGT CCAATCTCAA TGTTTATGTT AGATAGTTGC TAAACATTAT TGGTCCACTA
ATATCTTATT ATATCTGATT GTGCACACGT TTTTCAATCA TCAGAGACAA CTGTTTTGTT TGGTACAGGT TGTTGCTGGT
GGGGTATTGG GATGCATTAT AGCATTTCTT ATGAGAAAAT CAAATTAAGA TCCTTGTGAT GTGGCTGATA CTAGTCTTCA
GTGTCAAAAT TGTCGGTGCA TGAACGAAAC GAGAGCATCA TGGAAAGGAT ATAAAAAGCT GTTGATGCAA GTTGCAAGTG
TATAAAGTGC TTTGATGGTT CCTGAGGGAG ATCCTGCGTC CAGACTTTTG GACATTCAGA TTTCTCTTGT ACACATTAAT
TAATCGTTTT GTTAGTCCTG TCTTAATTGA TCGTTACACA ATTTGGGATC ACACGGGCTA TTCTTTGGCT TGTTGCAAAG
CACTCAAGGT TGCATTTTAT ATTTCATCCT TAAGTAGATT AATACTTATG TTTCTACATG GTTATCACAA TTTTGTTTTT
CAAGTTTTAA GCATCTGAAT TATACTGTGT CATTTTGATT GGTTGGCCGG GTTTATGGAG TAGTAGCTAT TAACATTTTA
TTGCTAATTT GATTGTCATA AATGATCACT CTTTGA

>Vigan.07G082100.01
GGGGAAAAAT GCATTTATTT TATTGAATCT CCAATGTGCA CTTTGATTTA ATTTATGAGT TGCAGTGGGA CATATAAAAT
GGGAGAATAT TAATTCCAAC AGGCTTTTTT GTCACTATAG AGTGAGGTAT CAGCAGAGAC GCGCGAGGGG AAGGTGGAGT
GCGGGTGAGG GTAAGCGTTC CGTTAGTTAC GTTAAGGTGT TATCGAGTTT GGTACATGGA CGAAGTGATG ACCATGGCGG
ATGTCGCAGC CAACACGCAA GGATCAACCA CCGCCTCTTC TTCCCTCCCT TCCAATTTCC CTCTCATCTC CGCCTTCCTC
TCCTTTGCCC TCGCACAGTT CCTCAAGATC TTCACCACCT GGTATAAGGA AAAGCGATGG GATTCTAAAA GGATGCTTGA
TTCGGGTGGA ATGCCTTCGT CACATTCTGC AACGGTGTCA GCTCTGGCTG TTGCTATAGG TCTCCAAGAA GGGGCAGGGT
CATCTGCTTT TGCTGTTGCC GTGGTCTTGG CATGTATTGT TATGTATGAT GCGTCAGGAG TTAGACTTCA TGCAGGTCGG
CAAGCAGAAT TGCTTAATCA AATTGTGTGC GAACTACCTC CTGAACATCC TTTGTCGAAT GTCAGACCGC TGCGTGATTC
ACTTGGTCAT ACTCCATTTC AGGTTGTTGC TGGTGGGGTA TTGGGATGCA TTATAGCATT TCTTATGAGA AAATCAAATT
AAGATCCTTG TGATGTGGCT GATACTAGTC TTCAGTGTCA AAATTGTCGG TGCATGAACG AAACGAGAGC ATCATGGAAA
GGATATAAAA AGCTGTTGAT GCAAGTTGCA AGTGTATAAA GTGCTTTGAT GGTTCCTGAG GGAGATCCTG CGTCCAGACT
TTTGGACATT CAGATTTCTC TTGTACACAT TAATTAATCG TTTTGTTAGT CCTGTCTTAA TTGATCGTTA CACAATTTGG
GATCACACGG GCTATTCTTT GGCTTGTTGC AAAGCACTCA AGGTTGCATT TTATATTTCA TCCTTAAGTA GATTAATACT
TATGTTTCTA CATGGTTATC ACAATTTTGT TTTTCAAGTT TTAAGCATCT GAATTATACT GTGTCATTTT GATTGGTTGG
CCGGGTTTAT GGAGTAGTAG CTATTAACAT TTTATTGCTA ATTTGATTGT CATAAATGAT CACTCTTTGA 

>Vigan.07G082100.01
ATGGACGAAG TGATGACCAT GGCGGATGTC GCAGCCAACA CGCAAGGATC AACCACCGCC TCTTCTTCCC TCCCTTCCAA
TTTCCCTCTC ATCTCCGCCT TCCTCTCCTT TGCCCTCGCA CAGTTCCTCA AGATCTTCAC CACCTGGTAT AAGGAAAAGC
GATGGGATTC TAAAAGGATG CTTGATTCGG GTGGAATGCC TTCGTCACAT TCTGCAACGG TGTCAGCTCT GGCTGTTGCT
ATAGGTCTCC AAGAAGGGGC AGGGTCATCT GCTTTTGCTG TTGCCGTGGT CTTGGCATGT ATTGTTATGT ATGATGCGTC
AGGAGTTAGA CTTCATGCAG GTCGGCAAGC AGAATTGCTT AATCAAATTG TGTGCGAACT ACCTCCTGAA CATCCTTTGT
CGAATGTCAG ACCGCTGCGT GATTCACTTG GTCATACTCC ATTTCAGGTT GTTGCTGGTG GGGTATTGGG ATGCATTATA
GCATTTCTTA TGAGAAAATC AAATTAA

>Vigan.07G082100.01
MDEVMTMADV AANTQGSTTA SSSLPSNFPL ISAFLSFALA QFLKIFTTWY KEKRWDSKRM LDSGGMPSSH SATVSALAVA
IGLQEGAGSS AFAVAVVLAC IVMYDASGVR LHAGRQAELL NQIVCELPPE HPLSNVRPLR DSLGHTPFQV VAGGVLGCII
AFLMRKSN*