GBrowse Details

Vigan.07G073600.01

Basic Information:
Name: Vigan.07G073600.01
Multiple alignment
Variant Information
Position: Chr07:5934108..5939547 (- strand)
Length: 5440
Functional Information:
Description: Similar to uncharacterized protein. [B8AC67, Oryza sativa subsp. indica]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.19,10.49,7.78,9.00,8.33,14.70,7.14,10.89
Automatic updates:
Name: NM_001248701 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499759 (LOC100499759), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:5934108..5934418 (- strand)
Length: 311
Type: three_prime_UTR
Position: Chr07:5934419..5934534 (- strand)
Length: 116
Type: CDS
Position: Chr07:5934944..5934989 (- strand)
Length: 46
Type: CDS
Position: Chr07:5938209..5938267 (- strand)
Length: 59
Type: CDS
Position: Chr07:5938998..5939049 (- strand)
Length: 52
Type: CDS
Position: Chr07:5939143..5939193 (- strand)
Length: 51
Type: CDS
Position: Chr07:5939268..5939366 (- strand)
Length: 99
Type: CDS
Position: Chr07:5939367..5939547 (- strand)
Length: 181
Type: five_prime_UTR

>Vigan.07G073600.01 class=Sequence position=Chr07:5934108..5939547 (- strand)
AATAATTTCT GTTATCTCTT CTAGCCCTGT TTACCTTTTT CGTTCTATTC TCTGCTTCGA ATTTTTGCAG TCGATTTGTA
TAGTTTGTTT CTTTGCACAA CCAAGACCAC GTGTGCGTTC CTGGTCTAGT AGTAGTACGA ATCAGAGAGA GGGTTCTTCT
GTGCTGATTA GGTTAAGCTG TATGCAGCAC AGTGATAATA ACATGGAAAC CTCCAAACTC AGTAACAGTA CTCAAAATAT
TCGATGCCAT CACTGCGCAG GACCCCTTTC AAACCGCATG GTATATTTCT TCCCAATAAT TGTTATTATT CTTTTATCTC
TTTCTCTCTT ACCAATTTCA TTCCTTTGAT TCAGGAAACT AGTCTCTGGA CCGTTTCGCC TCTCATCAGG GATAGCTTCT
CTATGGTGAA TTATTCTCAC CCATTTAGTT TATTTCTTCG ATATCTATGT GGGTGTGCGA AATTTCTGAT CTTTGTTTTT
GGGGTTGAAC ATTTTCAGAT TGGTTCTGCC GTTGGCGGCA CGGCGAGTGC ATTTTATGGA TTCAATCTTG GTATACACTC
TTGCTTCTCA TTTTTTGGTT ATTTTTTGAA AAAGCTTGCT AAGATTCTCT GAAATTAAAG GGGGTAATGC ATGGTGATCA
GTTGCAGACT GTTATTTGGA AATAGGAACA CTATGTATGT ATAGAAGTGC TTTGTCCATC ATGTCTATGT TAAATATCCA
TTTAACTGGT GTTGAATGTG TTTCCATACA CAGCTGAAGT TTGAGTGGTT TGCAAACTTT ATTTGTGGTA ACTGTTTACC
TTCCAAACTG TAGAATGTTA ATTTTTCATA GGTTTAATTA ATCATTTGTT CCTACATAAC CTTTTGTATT TGTTCCTATA
TCTAAAAGCT CTATATTTTA GTCTTATACA AGCATTTGTT TTTGTTTTAA CCCTTGTTAG CTTTCTGACA GTATAAAATT
GTCTCAAAAT GTGGTATAAA GACTAAAATT TAAGAGAAGA ATCGCCGTGT GTAGGTACTG AAACATAGAA TTTTAGATAT
AGGGACTAAA ACGAAAACTT GGCACAAATG TTAGGATCAA ATGATTAATG AAACCTTTTT AATATTTAGA AACTAAACTA
TTTTGTTTTT TACTTAGCAT GAAACTCTAT ACGTATATAT TTTTGCTTAC TTTCTTAGAT GATTGCAACA TTACACTGAA
TCTTTTGTCC GTGAAGACTG CTTGTTTTAT GTATTTAACA TATTCAGATT TCCGAAGTAA TTTTTTGTTG TCCAATGCAG
TTATGCCAAT TGTCCAGAGA AGAATAAAAG GACCCATGTG GTTGCATTTT TTCATTGGTG TAAGTTCATT GTTTATATAT
ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT
ATATATATAT ATCTGTTGCT TTTAGTTTTT GTTCGTTGTT TTTTTTGCTT TTCATAACAC TAGTTCATGG TTTTTCCCCG
TATTCAATGC TTAGGAGATG TAAATCTTTG AATAGTTAAC TCTGAGTATA ACTTCAGCTC GTCATATTAT GTTCTTTTAA
ATAGTTATGA ACTTTGACAT TTCCTTTCTT CTTTAATAAG AAATCAGGGA AAGATTATTA ACCAAGAGAC TGCACTTCTT
TCTTGTTAAC CTTCTAATAA ACTGACGCTG TACTGTAGTT GGCAAAGTTA TGTAAATTCT TAAATGTACA AAGTTAAACC
ATTTGTCCCC TAACTAATTC TCGCTAGCTA TTGAAATTAT TCTATATCTG TGACATCATG AGACAGTTAA CTGATACTAT
AACCCTGTAA CTTTCATACA CTGGTAAAGG TACAGCCCTC GTGACCCAGA CTCCTTTGCT TTCTCTGATG ATCTGAACAC
ATTTTGTCAT TTTAAATAGA AGTGAGATGA CTTATATCAT TTTATTATCT GCAAAAGAAT CATAAAGTAT AAATAGAACT
TAAAACAGGA GAATTCACTG ATTATTAGTT AATTCTGGTT GTGTTTTCTA CTTACAGAAT TCTTTGATGG CTAAGTTTTG
AACCAGATAG ATAGTTTATT TTCAGTAAAC AAAAGGGGAA ACAATATTGT TGGGAAGAGT TATGGGAGGG TTTGGCTTTT
GTTATGTTCT TGAAGCGGCT TCTAAAAGTT ACCTTTCTCC ATCCACTTTG AACTCTTTTT TATGAAAAAT TTTGTTCACA
ATTTCTAAAA CTGCTGGTGT TGTTTGTCTG CACCATCTTG GATCATCATT GTTTTCCATT TTGTATCAGT CTTGTTTTGG
TGCATACATC ATTGGTTGGT TTCCAGGTAA ACAAGATTAG TATTTTTCTA TTACCTGTAA ATTCAGCTGG ACCCATTCTT
CTCCGTCTAA TTGTGTAATT TGTGCCATTG GGGGCATTCA TAGTATATTT TGCAATATCA TCGGGAAAGA ATTAAGCTTC
TTAGATGATG AAGCATCTTA GAGTTTTTCA CTAATAAGTT GTGTTGAATA TAGTGAAAAA CTATATTTAG ATTAATCTCC
CTTGTGTAAA ATACACACAT AGGGTTCTCT ATTTATAATA GAAGAAATAT GGACTAAGCC CAAAATACAA ATGAGAAATA
ATAACAAACC AACTAAAAGA TAAAAGATAA TATATCTAAC ACTCCCCCTC AAGCTGGAGC ATACAAATTG TATGAACTAA
GCTTGGAATA GATGAACTCA GTGTTAAACT AGATGATTTG TCTTCAAGAG TGTGAGGCAA ACATAGATGA ACTAACAGCA
GCTTGTGAAA CTTCAACTTC AAAAGTGGAT GAAGGAAAGC AGTGGTGGAC AATGACAATC TGCAAGGACT GATTCCCAAT
CAATGATGGA TGAGTGACGG GATCAACAGT GGTAGCTGAA AGCTAAGAGC TACAAAACTG CAGGGACTAC ACTAAATTCT
CATCAATGAT GGATGGGTGA CGGGATCAAC AGTAGTAGCT GAAATCTACA AAACTGCAGG GACTACACCC ATATATATGT
GACTTGACTT GCAGTGTCTT GGAAACGTAC TCCCCCTCAG TGTGACGGCG GAAATGTGGA ATATCACAGT TGCTGGACCA
CTAAAACAAA ACAAAATATT AAGCTACAAT GCTGAAACAA AGACATCAAA GATCCAAAGA TACGTTGGAG GTCCAAAATT
CTTTGCTGGA CAACTCCCAA GTGGTGATAC TTAGCCGTGT ATCACAAGAA GATCGGGCTA AACTCTAGCC CAAGAAGAAC
TGACGCAATT GCGTCTGTCT GAGGCGATAG CGACTGTAGC GGCGGTTGAC TGCTATAAAA CTGTAGGGAC TAAATTGCCA
TCACTGACTG ATGGGGCCTG TAGTGGCGGG AAGCGACAAA ACTACAGGGA CTGCCATCAC TAACTGACGA GGTGATGGGG
GCCTACCGTG GTTGGAAGCA TACGGTGCTT GGACAGCGGC AAACGGCGCG GGACAGCGGG AAACGGCGCG GGACAGCGGG
AAACGGCGCG GGACAGCGGG AAACGGCGCG GGACAGCGGG AAACGGTGCG GGACAGCGGG AAACGGCGCG GGACAGCGGC
AAACGGCGCG GGACAGCGGC AAACGATGCC TGTACAATGG AAAACGGTGC TGGAACGACA TCAGCAGCTG AGACGAAGCA
CACAACGCAG AAAGGAAGGT CCGACAATGC GGAACGTGCG GCGAGATGAA GATGCTTTGA AGACAGACGA AGATGGCAGC
AATGGCTGCT CTGGAAGGTC TGAACAGAGA GAGGGAGGTC CGGCGAGACA ACCGGAAGCG TCGCGGTTTG ATGCCGATGC
TGGGAAGGCG GCGCGTGACG GAGCGTGGGA AAGAGTCAGA CGCCGGCACC GGTGGGGTTG GTCGTCGCGT GAAGAGGCGA
ACCAGATGCA GTGGTCGCCG GACGGAATTG TGACGGTGGC CGGCGACAAG GCGGCGGCGG ACTGGCCGGA AAGAAGCGCT
GCGTGGCGGC GCGTGACTGA TAGGTGGCTC TCGAAACCGG CGTGGTTGGC CGTCGCTCGA AGAGACGGTC CAGATCCGCA
GGTCACCCGT CGAATCTGTG ACGGTGGCCG GCGGTAGCGG CGGCGACGGT GGCCGGAGTT AGCAGTGACG GCAGCGGAAA
GTGGCGGCGA CAGCAGTGGC ACACTGGGTC TGGACTGGTG CTGACTGTGG CAAAGATTTA AGAAGAAAAG TGGACTGCCC
ACTAAGATTT TAGGGGCTGC CGGCAGACAG CAGAGACCAC CAAAAGAGGA TCAGAGAACT TGCTCTGATA CCATGTTGAA
TATAGTGAAA AACTATATTT AGATTAATCT CCCTTGTGTA AAATACACAC ATAGGGTTCT CTATTTATAA TAGAAGAAAT
ATGGGCTAAG CCCAAAATAC AAATGAGAAA TAATAACAAA CCAACTAAAA GATAAAAGAT AATATATCTA ACAAGTTGTA
CGTTTGAATA CTGTGTTCCT TCTTAATGCA GTCAAAACAT TTTTACCATC TTATTGACAT AACTTCTCTG TAATTCAGGC
ACCCCCTGTG ATAGTATTCT CTTCAGCATG CGCAGGACTG ACAGGTGAGT TCTGAATTTG ATGTTTTTTG CTGGCATGTG
TATAATACTC CTTCTGTGTT CTGTTTTCTG AATTCGTAAC TCTGTAGGGA AAGTTTTGGG AAAACAAAAA ACACCTACAA
GACTTAGTTG CGTTGAGAAC TAAAAAACTT TTATGACAAC ACCTACTTAA AATGTTTTCT GTTTCTATGG AGTGCTAGCC
ATTCTATTTG TACATTTGAA TAGTCTAGAT TCTTGATTGA AACCGTGAAC TTATTATTTT TTATTGCGTT AATTATTGAA
GAATCATAAC CTGTGTTTAT CATGTTATCA TCTGACAATT CAATTCAATT CAAGTATTGG AAGTCTTCAT TTATAGCAGG
ACAAAGGGTG AAGTTTGTTT CATGCTGATA AAAGTTTCAT TGACATAATG CAGGTGGTGC TATTCCTGCT GCGGCACAAC
TTGTTTCCTC CTCTTATCAT GCAGCATACT CATCTCCTAC CGTACCTCCG CCATCAGAGA ATGAAAATAT TCAAAAGTCA
ATAAAATGAG ATAATTGCTT TCATCATAAT GTGTGTGCTG ATGAGAGTTT TGTTTTTTTA CCTGTGTAAA TACTGCTCCA
TGATTTCTGT GATTTCTTTT TATCTTACAA CACATAGGTA GTGTTTCACA ATGTAATTTC AGTTCATATG AACCAGTTGC
TTAGATTAGA GAGATATACC GGGAATTCAC TTTGGTAATA ACTTAATTAG AGGGAAGTAT ATAATGTAAT CACGCCGTTG
TCTTACATTT CCATTCGAGT ACCATAAGAT TTTAATAAAG ACTTTTCTAG AAAAAATAAA TAAAAATTAA GATTAGTTTA

>Vigan.07G073600.01
AATAATTTCT GTTATCTCTT CTAGCCCTGT TTACCTTTTT CGTTCTATTC TCTGCTTCGA ATTTTTGCAG TCGATTTGTA
TAGTTTGTTT CTTTGCACAA CCAAGACCAC GTGTGCGTTC CTGGTCTAGT AGTAGTACGA ATCAGAGAGA GGGTTCTTCT
GTGCTGATTA GGTTAAGCTG TATGCAGCAC AGTGATAATA ACATGGAAAC CTCCAAACTC AGTAACAGTA CTCAAAATAT
TCGATGCCAT CACTGCGCAG GACCCCTTTC AAACCGCATG GAAACTAGTC TCTGGACCGT TTCGCCTCTC ATCAGGGATA
GCTTCTCTAT GATTGGTTCT GCCGTTGGCG GCACGGCGAG TGCATTTTAT GGATTCAATC TTGTTATGCC AATTGTCCAG
AGAAGAATAA AAGGACCCAT GTGGTTGCAT TTTTTCATTG GTGCACCCCC TGTGATAGTA TTCTCTTCAG CATGCGCAGG
ACTGACAGGT GGTGCTATTC CTGCTGCGGC ACAACTTGTT TCCTCCTCTT ATCATGCAGC ATACTCATCT CCTACCGTAC
CTCCGCCATC AGAGAATGAA AATATTCAAA AGTCAATAAA ATGAGATAAT TGCTTTCATC ATAATGTGTG TGCTGATGAG
AGTTTTGTTT TTTTACCTGT GTAAATACTG CTCCATGATT TCTGTGATTT CTTTTTATCT TACAACACAT AGGTAGTGTT
TCACAATGTA ATTTCAGTTC ATATGAACCA GTTGCTTAGA TTAGAGAGAT ATACCGGGAA TTCACTTTGG TAATAACTTA
ATTAGAGGGA AGTATATAAT GTAATCACGC CGTTGTCTTA CATTTCCATT CGAGTACCAT AAGATTTTAA TAAAGACTTT
TCTAGAAAAA ATAAATAAAA ATTAAGATTA GTTTA

>Vigan.07G073600.01
ATGCAGCACA GTGATAATAA CATGGAAACC TCCAAACTCA GTAACAGTAC TCAAAATATT CGATGCCATC ACTGCGCAGG
ACCCCTTTCA AACCGCATGG AAACTAGTCT CTGGACCGTT TCGCCTCTCA TCAGGGATAG CTTCTCTATG ATTGGTTCTG
CCGTTGGCGG CACGGCGAGT GCATTTTATG GATTCAATCT TGTTATGCCA ATTGTCCAGA GAAGAATAAA AGGACCCATG
TGGTTGCATT TTTTCATTGG TGCACCCCCT GTGATAGTAT TCTCTTCAGC ATGCGCAGGA CTGACAGGTG GTGCTATTCC
TGCTGCGGCA CAACTTGTTT CCTCCTCTTA TCATGCAGCA TACTCATCTC CTACCGTACC TCCGCCATCA GAGAATGAAA
ATATTCAAAA GTCAATAAAA TGA

>Vigan.07G073600.01
MQHSDNNMET SKLSNSTQNI RCHHCAGPLS NRMETSLWTV SPLIRDSFSM IGSAVGGTAS AFYGFNLVMP IVQRRIKGPM
WLHFFIGAPP VIVFSSACAG LTGGAIPAAA QLVSSSYHAA YSSPTVPPPS ENENIQKSIK *