GBrowse Details

Vigan.07G065100.01

Basic Information:
Name: Vigan.07G065100.01
Multiple alignment
Variant Information
Position: Chr07:4975960..4978026 (+ strand)
Length: 2067
Functional Information:
Description: Similar to Uncharacterized protein. [O64999, Glycine max]
GO: Biological Process: transmembrane transport (GO:0055085)
Cellular Component: integral to membrane (GO:0016021)
InterPro: Major facilitator superfamily (IPR011701)
Major facilitator superfamily domain, general substrate transporter (IPR016196)
Major facilitator superfamily domain (IPR020846)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.46,0.02,0.32,0.00,0.53,0.74,269.92,0.05
Arabidopsis thaliana homolog: AT1G08090.1, AT1G08100.1, AT1G12940.1, AT3G45060.1, AT5G60770.1, AT5G60780.1
Automatic updates:
Name: NM_001249515 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max NRT2 protein (NRT2), mRNA.
PubMed ID: 9715532 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr07:4975960..4976080 (+ strand)
Length: 121
Type: five_prime_UTR
Position: Chr07:4976081..4976890 (+ strand)
Length: 810
Type: CDS
Position: Chr07:4977003..4977118 (+ strand)
Length: 116
Type: CDS
Position: Chr07:4977211..4977877 (+ strand)
Length: 667
Type: CDS
Position: Chr07:4977878..4978026 (+ strand)
Length: 149
Type: three_prime_UTR

>Vigan.07G065100.01 class=Sequence position=Chr07:4975960..4978026 (+ strand)
CTCTTACACA GTCAACTCCT TCCTCACTAT AAAGCCACAC CACACTCCTT CCTTCTTCTT CAAAGCACCA ACTCTTCAAT
TCCTATTCTA CCTCTTCATC CGCCATTGTT GTCAATATCA AATGGCTGAG ATTGAGGGCT CTCCTGGAAG CTCCATGCAT
GGAGTCACAG GAAGAGAGCA AACTTTTGTA GCCTCAGTTG CTTCTCCAAT GGTCCCCACC GACACCACAG CAAAGTTTGC
TCTCCCTGTA GATTCTGAAC ACAAGGCCAA GGTTTTCAAA CTCTTCTCCC TCGCCAATCC TCACATGAGA ACCTTCCACC
TTTCTTGGAT CTCCTTCTTC ACCTGCTTTG TCTCCACCTT CGCAGCAGCC CCTCTTGTTC CCATCATCCG CGACAACCTC
AATCTCACCA AAAGCGACAT TGGAAACGCC GGCGTTGCTT CTGTGTCCGG AAGCATTTTC TCTAGGCTCG CAATGGGTGC
AGTGTGCGAC CTCTTGGGTC CTCGTTATGG CTGCGCCTTC CTCATCATGC TCTCCGCTCC TACCGTGTTT TGCATGGCCT
TTGTGCAAGA TGCTTCTGGG TATATAGCGG TTCGGTTTTT GATAGGGTTC TCCTTGGCCA CGTTCGTGTC GTGCCAGTAC
TGGATGAGCA CCATGTTCAA CAGCAAGATC ATAGGACTTG CAAATGGAAC TGCGGCAGGG TGGGGTAACA TGGGTGGTGG
AGCCACTCAG CTCATAATGC CTTTGGTGTA TGAACTTATC AGAAGAGCTG GGGCTACTCC CTTCACCGCT TGGAGGATTG
CCTTCTTTGT TCCTGGTTGG TTGCATGTCA TCATGGGGAT CTTGGTCCTA ACTCTAGGTC AGGACTTGCC TGATGGAAAC
CTTGGAGCCT TGCAGAAAAA GGGTGATGTA GCCAGAGATA AGTTTTCTAA GGTTAGTGAT CCAAAAAGAT ATTTTCAACA
TCCTTATATG AAAAATAATA AATTTATGAT TGGTGATATG GCATAACAAA TTATGAAGTA ACGAATTTCA ACTATTTGTT
CAGGTACTAT GGTATGCCAT AACAAATTAC AGAACATGGG TTTTTGCTCT TCTCTATGGG TACTCAATGG GAGTTGAATT
GACAACAGAC AATGTCATTG CCGAGTATTT CTATGATAGG TTAGTTCATT CATGCATCAG TTTAATTGTT GTTCTGCAAC
AAATTGGTGT TTGAACCTTA CATAATGAAC TAATAAATTA ATATGAAACA GATTTAATCT GAAGCTGCAC ACTGCTGGAA
TCATCGCTGC CTCGTTTGGA ATGGCAAACC TAGTTGCTCG ACCCTTTGGT GGGTATGTTT CCGATGTTGC AGCGAGGGTG
TTTGGAATGA GGGGAAGATT GTGGACGCTT TGGATACTCC AAACCTTAGG AGGGGTTTTC TGTATTTGGC TCGGGCGTGC
GAATTCTCTT CCTATTGCTG TCTTGGCTAT GATATTGTTC TCTATAGGAG CTCAAGCTGC ATGTGGTGCA ACTTTTGGTA
TCATTCCTTT CATCTCAAGA AGGTCTTTGG GGATCATATC AGGTCTTACT GGTGCGGGTG GAAACTTTGG GTCTGGCCTC
ACCCAATTGG TTTTCTTTTC AACCTCGAAA TTCTCCACTT CCACAGGTCT CTCGTTAATG GGAGCTATGA TAGTGGCTTG
CACTCTTCCT GTGACTCTTG TTCACTTCCC ACAGTGGGGT AGCATGTTCC TACCTCCCTC AAAAGATGTC AACAAATCCA
CTGAAGAATT CTATTACACC TCTGAATGGA ATGAAGAGGA GAGGCAGAAG GGCTTGCACC AGTCAAGTCT CAAGTTCGCC
GAGAATAGCC GATCTGAGAG AGGAAAACGC GTCGCATCAG CCCCAACACC TCCAAATACA ACTCCCACCC ATGTCTAACT
TAAATTGAAA CTTCATCAAA GACAATTCCA TAACAGTATT GAGACTTCAA ATTCCAATAT AAGTGAAGCT TTTTCTAATA
AAAGACCTTG TGCTTAGTTG TTCTTAGTTG TGCTTAGTGC CATACCATAA TCAATATATC TTGATGC

>Vigan.07G065100.01
CTCTTACACA GTCAACTCCT TCCTCACTAT AAAGCCACAC CACACTCCTT CCTTCTTCTT CAAAGCACCA ACTCTTCAAT
TCCTATTCTA CCTCTTCATC CGCCATTGTT GTCAATATCA AATGGCTGAG ATTGAGGGCT CTCCTGGAAG CTCCATGCAT
GGAGTCACAG GAAGAGAGCA AACTTTTGTA GCCTCAGTTG CTTCTCCAAT GGTCCCCACC GACACCACAG CAAAGTTTGC
TCTCCCTGTA GATTCTGAAC ACAAGGCCAA GGTTTTCAAA CTCTTCTCCC TCGCCAATCC TCACATGAGA ACCTTCCACC
TTTCTTGGAT CTCCTTCTTC ACCTGCTTTG TCTCCACCTT CGCAGCAGCC CCTCTTGTTC CCATCATCCG CGACAACCTC
AATCTCACCA AAAGCGACAT TGGAAACGCC GGCGTTGCTT CTGTGTCCGG AAGCATTTTC TCTAGGCTCG CAATGGGTGC
AGTGTGCGAC CTCTTGGGTC CTCGTTATGG CTGCGCCTTC CTCATCATGC TCTCCGCTCC TACCGTGTTT TGCATGGCCT
TTGTGCAAGA TGCTTCTGGG TATATAGCGG TTCGGTTTTT GATAGGGTTC TCCTTGGCCA CGTTCGTGTC GTGCCAGTAC
TGGATGAGCA CCATGTTCAA CAGCAAGATC ATAGGACTTG CAAATGGAAC TGCGGCAGGG TGGGGTAACA TGGGTGGTGG
AGCCACTCAG CTCATAATGC CTTTGGTGTA TGAACTTATC AGAAGAGCTG GGGCTACTCC CTTCACCGCT TGGAGGATTG
CCTTCTTTGT TCCTGGTTGG TTGCATGTCA TCATGGGGAT CTTGGTCCTA ACTCTAGGTC AGGACTTGCC TGATGGAAAC
CTTGGAGCCT TGCAGAAAAA GGGTGATGTA GCCAGAGATA AGTTTTCTAA GGTACTATGG TATGCCATAA CAAATTACAG
AACATGGGTT TTTGCTCTTC TCTATGGGTA CTCAATGGGA GTTGAATTGA CAACAGACAA TGTCATTGCC GAGTATTTCT
ATGATAGATT TAATCTGAAG CTGCACACTG CTGGAATCAT CGCTGCCTCG TTTGGAATGG CAAACCTAGT TGCTCGACCC
TTTGGTGGGT ATGTTTCCGA TGTTGCAGCG AGGGTGTTTG GAATGAGGGG AAGATTGTGG ACGCTTTGGA TACTCCAAAC
CTTAGGAGGG GTTTTCTGTA TTTGGCTCGG GCGTGCGAAT TCTCTTCCTA TTGCTGTCTT GGCTATGATA TTGTTCTCTA
TAGGAGCTCA AGCTGCATGT GGTGCAACTT TTGGTATCAT TCCTTTCATC TCAAGAAGGT CTTTGGGGAT CATATCAGGT
CTTACTGGTG CGGGTGGAAA CTTTGGGTCT GGCCTCACCC AATTGGTTTT CTTTTCAACC TCGAAATTCT CCACTTCCAC
AGGTCTCTCG TTAATGGGAG CTATGATAGT GGCTTGCACT CTTCCTGTGA CTCTTGTTCA CTTCCCACAG TGGGGTAGCA
TGTTCCTACC TCCCTCAAAA GATGTCAACA AATCCACTGA AGAATTCTAT TACACCTCTG AATGGAATGA AGAGGAGAGG
CAGAAGGGCT TGCACCAGTC AAGTCTCAAG TTCGCCGAGA ATAGCCGATC TGAGAGAGGA AAACGCGTCG CATCAGCCCC
AACACCTCCA AATACAACTC CCACCCATGT CTAACTTAAA TTGAAACTTC ATCAAAGACA ATTCCATAAC AGTATTGAGA
CTTCAAATTC CAATATAAGT GAAGCTTTTT CTAATAAAAG ACCTTGTGCT TAGTTGTTCT TAGTTGTGCT TAGTGCCATA
CCATAATCAA TATATCTTGA TGC

>Vigan.07G065100.01
ATGGCTGAGA TTGAGGGCTC TCCTGGAAGC TCCATGCATG GAGTCACAGG AAGAGAGCAA ACTTTTGTAG CCTCAGTTGC
TTCTCCAATG GTCCCCACCG ACACCACAGC AAAGTTTGCT CTCCCTGTAG ATTCTGAACA CAAGGCCAAG GTTTTCAAAC
TCTTCTCCCT CGCCAATCCT CACATGAGAA CCTTCCACCT TTCTTGGATC TCCTTCTTCA CCTGCTTTGT CTCCACCTTC
GCAGCAGCCC CTCTTGTTCC CATCATCCGC GACAACCTCA ATCTCACCAA AAGCGACATT GGAAACGCCG GCGTTGCTTC
TGTGTCCGGA AGCATTTTCT CTAGGCTCGC AATGGGTGCA GTGTGCGACC TCTTGGGTCC TCGTTATGGC TGCGCCTTCC
TCATCATGCT CTCCGCTCCT ACCGTGTTTT GCATGGCCTT TGTGCAAGAT GCTTCTGGGT ATATAGCGGT TCGGTTTTTG
ATAGGGTTCT CCTTGGCCAC GTTCGTGTCG TGCCAGTACT GGATGAGCAC CATGTTCAAC AGCAAGATCA TAGGACTTGC
AAATGGAACT GCGGCAGGGT GGGGTAACAT GGGTGGTGGA GCCACTCAGC TCATAATGCC TTTGGTGTAT GAACTTATCA
GAAGAGCTGG GGCTACTCCC TTCACCGCTT GGAGGATTGC CTTCTTTGTT CCTGGTTGGT TGCATGTCAT CATGGGGATC
TTGGTCCTAA CTCTAGGTCA GGACTTGCCT GATGGAAACC TTGGAGCCTT GCAGAAAAAG GGTGATGTAG CCAGAGATAA
GTTTTCTAAG GTACTATGGT ATGCCATAAC AAATTACAGA ACATGGGTTT TTGCTCTTCT CTATGGGTAC TCAATGGGAG
TTGAATTGAC AACAGACAAT GTCATTGCCG AGTATTTCTA TGATAGATTT AATCTGAAGC TGCACACTGC TGGAATCATC
GCTGCCTCGT TTGGAATGGC AAACCTAGTT GCTCGACCCT TTGGTGGGTA TGTTTCCGAT GTTGCAGCGA GGGTGTTTGG
AATGAGGGGA AGATTGTGGA CGCTTTGGAT ACTCCAAACC TTAGGAGGGG TTTTCTGTAT TTGGCTCGGG CGTGCGAATT
CTCTTCCTAT TGCTGTCTTG GCTATGATAT TGTTCTCTAT AGGAGCTCAA GCTGCATGTG GTGCAACTTT TGGTATCATT
CCTTTCATCT CAAGAAGGTC TTTGGGGATC ATATCAGGTC TTACTGGTGC GGGTGGAAAC TTTGGGTCTG GCCTCACCCA
ATTGGTTTTC TTTTCAACCT CGAAATTCTC CACTTCCACA GGTCTCTCGT TAATGGGAGC TATGATAGTG GCTTGCACTC
TTCCTGTGAC TCTTGTTCAC TTCCCACAGT GGGGTAGCAT GTTCCTACCT CCCTCAAAAG ATGTCAACAA ATCCACTGAA
GAATTCTATT ACACCTCTGA ATGGAATGAA GAGGAGAGGC AGAAGGGCTT GCACCAGTCA AGTCTCAAGT TCGCCGAGAA
TAGCCGATCT GAGAGAGGAA AACGCGTCGC ATCAGCCCCA ACACCTCCAA ATACAACTCC CACCCATGTC TAA

>Vigan.07G065100.01
MAEIEGSPGS SMHGVTGREQ TFVASVASPM VPTDTTAKFA LPVDSEHKAK VFKLFSLANP HMRTFHLSWI SFFTCFVSTF
AAAPLVPIIR DNLNLTKSDI GNAGVASVSG SIFSRLAMGA VCDLLGPRYG CAFLIMLSAP TVFCMAFVQD ASGYIAVRFL
IGFSLATFVS CQYWMSTMFN SKIIGLANGT AAGWGNMGGG ATQLIMPLVY ELIRRAGATP FTAWRIAFFV PGWLHVIMGI
LVLTLGQDLP DGNLGALQKK GDVARDKFSK VLWYAITNYR TWVFALLYGY SMGVELTTDN VIAEYFYDRF NLKLHTAGII
AASFGMANLV ARPFGGYVSD VAARVFGMRG RLWTLWILQT LGGVFCIWLG RANSLPIAVL AMILFSIGAQ AACGATFGII
PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSKFSTST GLSLMGAMIV ACTLPVTLVH FPQWGSMFLP PSKDVNKSTE
EFYYTSEWNE EERQKGLHQS SLKFAENSRS ERGKRVASAP TPPNTTPTHV *