GBrowse Details

Vigan.07G052400.01

Basic Information:
Name: Vigan.07G052400.01
Multiple alignment
Variant Information
Position: Chr07:3739825..3744058 (+ strand)
Length: 4234
Functional Information:
Description: Similar to Uncharacterized protein. [I1M4U9, Glycine max]
GO: Biological Process: cellular metabolic process (GO:0044237)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: coenzyme binding (GO:0050662)
InterPro: NAD-dependent epimerase/dehydratase (IPR001509)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.27,0.41,29.68,17.85,21.39,54.46,15.51,104.76
Arabidopsis thaliana homolog: AT2G28760.2, AT3G46440.1, AT5G59290.2
Automatic updates:
Name: NM_001252978 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max UDP-glucuronic acid decarboxylase 1-like (LOC100790835), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:3739825..3740466 (+ strand)
Length: 642
Type: five_prime_UTR
Position: Chr07:3740467..3740577 (+ strand)
Length: 111
Type: CDS
Position: Chr07:3740809..3740895 (+ strand)
Length: 87
Type: CDS
Position: Chr07:3741013..3741100 (+ strand)
Length: 88
Type: CDS
Position: Chr07:3741692..3741783 (+ strand)
Length: 92
Type: CDS
Position: Chr07:3741860..3741924 (+ strand)
Length: 65
Type: CDS
Position: Chr07:3742001..3742089 (+ strand)
Length: 89
Type: CDS
Position: Chr07:3742250..3742327 (+ strand)
Length: 78
Type: CDS
Position: Chr07:3742444..3742537 (+ strand)
Length: 94
Type: CDS
Position: Chr07:3742793..3742859 (+ strand)
Length: 67
Type: CDS
Position: Chr07:3742936..3742999 (+ strand)
Length: 64
Type: CDS
Position: Chr07:3743110..3743150 (+ strand)
Length: 41
Type: CDS
Position: Chr07:3743414..3743599 (+ strand)
Length: 186
Type: CDS
Position: Chr07:3743600..3744058 (+ strand)
Length: 459
Type: three_prime_UTR

>Vigan.07G052400.01 class=Sequence position=Chr07:3739825..3744058 (+ strand)
TAGTAAATTA TAGTCATAGA AGCAAAATTC AATGTGGGGT TTGGTTTGGT TGTGTCGGGT TTGGTTTGGT TTTTCTTTTC
TGAATCTTTA CTGCAGAATA ATAGTTTGGT GTGATTTCCA TTACTATTGT CGTTGTCCAG GAGCTTTCAT TATGTCCTTC
AACTTTCCGT GACTTTCAAG CTTTCCAAAT TGAATTATGT TTCTCAGGGG GTAATTTTAT CTATTCTATG CTTAAAGTTT
TGATTTTTTT TTTATCAAAC TTCCAAATTG AATTTAGAAG TTTGGTGGAA TAATTTTTCA TATCTTGGTT GTCATTCATC
TATATAAATG GGTCTGCGAT CTTGCAGTAG TGGTAAGACA AGAGTGGTTA GGGTTTTGGT TTGGTGCTTT TGTGAAGCTA
TATATCTTGG TGTTCTTTTG AGATCAGGTG CTTGACTTGC TCTGTTACTT TCTTATTCTG ATTGCTTTTA ATGGCATTTG
TCACTCTTTT CCCTATTTGT TGCTCCAATT GACCCCTTTT AAATAGATAT CAGTTCACAT GATTTGGGTT GGGAAATTTA
TATCTTATTT AGTTTAAATG TTCTGTGCTA AGCATTGATC ACCCGAACAT TTGTGTAGGA ATTAATTTCT GAGGTCCAAA
CAATGGCAAC GGATTCTTCC AATGGTAATG GACATCACCA GACGACAACA TCAATAACAA CAACAAAGAC ACCTCCTTCA
CCATCTCCCC TGCGCTTTTC CAAATTTTTT CAGGTGAAGC ATTGATCCTT TTAGCTTGAC TATCATTTTC CATACAAGAT
CATTTACGTT TCTTCTTTGA TCCAATTTCA TGTTCGTTCA GTTATTTAGT GTCATTTTTT TTACTAAAAG TACACTAATG
ATCATGAGGT GTTAGTAAAT TTAGAAAATG GTTACTTTGA GGATGGCCAT TTTGTCTCGT TTTGATGCCA TGTTTACATG
TATCTCTTTC ATTCTTGATA ATAGTCCAAC ATGAGGATCT TGGTCACTGG AGGAGCTGGA TTCATTGGAT CTCACTTAGT
TGACAGATTG ATGGAAAATG AAAAAAATGA GGTCAGCTGG TTGATTTTTT GCTCATAACC TGTAATCATC CTATATTTGA
TAAATACAGC ATCTGGAACT AAGTTTGATT TCATAAAGTT ATGCGACAAT ATCATTGTGT TTAATCAGGT CATTGTTGCT
GACAACTACT TCACTGGATC CAAGGACAAC CTCAAAAAAT GGATTGGCCA TCCAAGATTT GAGCTTATCC GTCATGGTAA
AGTATCATCT TTTTTTACTG TCAACTATCA ATGCCAATGA AATTGTCATA AGCAAGATAA AGTGAAGATT TTTGTTGATT
TATTTTTTGC TCAGTAAGCT GATATATTTG AGCTTGTAGA TCTTTTGCAT TCAGCGTAAG CTTCATAGTT GTTACACCAT
GAATTAAAGA AATCATTATT TTTAAACTGT TTATTTAATA ACCAGTTAGT TAACCATCCC ATGCTGTTGT AAGGGAACAA
TAATGAACTA ATGCTGATAG GATACTATTC TATTGACTAG TTATGTCTAA CTAAAGGGAT ACAAATAAGA GTAAATCATA
GTTCTCTGCC TTCTTTCATC CATCCAGGAA ATATATATAA GAAAAAACAT GTTTCAAAAA TTGGCTACAA TCGAGTAACA
GAAGGGAATC AAATAAATAA AAGACTCACT ACTTGCCGGT TAAAACCATT TTCTATATTG ACTTAATCCT TTTGGGTGGC
TTGGGTTGCT GTCAGATACT GATTCTGCAT TACTATGTTC AGCATTACTA GATCATTTTT GTAAACCAAT GATGTTGATG
CTAATTATGA ATTTGATACA TTGGTAGATG TCACGGAGCC TTTGCTGATA GAGGTTGATC AGATCTACCA TCTTGCATGC
CCTGCCTCTC CTATATTCTA CAAATACAAT CCAGTGAAGG TATAATTTTG AGAGTCTATT TGCCTTTCTA GTACTTCACA
TGCATACTAA CTTTAAGGGA GTGATTGCTT TACAGACTAT AAAGACTAAT GTCATAGGCA CTCTCAATAT GCTTGGGCTT
GCAAAGAGAG TAGGAGCAAG GTTATGATTC TTTTTTAACG ATAATCTCAA TTCGCTGCCA TTAGTTGGTC TTAATTAGTT
TGAATTTTAC TGACAGGATT TTGCTTACAT CAACTTCTGA GGTATATGGA GATCCTCTTG TGCACCCTCA ACCTGAAAGC
TATTGGGGAA ATGTTAACCC AATTGGTAGG TTCCTTTATT TCATTCCCAT CTTGAATAAA AGAGCTTCTT GAATGGAACT
GTTTCCATTG ATGAATATGA ACTCTAAATT ACTGGAGATA TATGTATCCT TTTATGCATA TTCTTAAAGC TGTAGTCTGA
GGTCTTTAAT ATATGATGAT ATCAGGAGTC CGTAGTTGCT ATGATGAGGG GAAACGGGTG GCTGAAACTT TGATGTTTGA
TTACCATAGG CAGCATGGGA TTGGTAATTT TCATGTCTTC TTTTCCTCAT AATAGCTTCT TATTTTTTCT AAGGCGTATG
CAGTAAGTGT TTCCTTTAGT TTTTTAACTC TTCGCGGTGT TTTTATCTTT TCAAAATAGA AATACGCATT GCAAGAATCT
TTAACACATA TGGACCACGC ATGAATATTG ACGATGGGCG TGTTGTTAGC AATTTCATTG CTCAAGCACT TCGGTAATTA
CTTGACTGTT TTCTGGTATA AATTCGTGCT ATAATGTTGT TACCTCTGCA TGTTTTGTTA TGGTTTAACC ATTGCATGAT
TTGTTCAATG ATCATGCTTG ATTGCAACTC TAGATCGATC ATTGATATAA TATAATTGTT TTAAATTTTA ATACTTTAAG
TTTGGTGACT CGCTATAATT TTTTTTTCTT TCTTAGACTT ATTGTTATTT TGATTCAATC TCATTATATA ATCAATGGTT
CGTTATAGGG GGGAGTCCTT GACAGTCCAA AGTCCAGGAA CTCAAACTCG AAGTTTCTGT TATGTCTCTG ACCTGGTATA
TATCCCGTAA TCTTTGTATC TTTGAATTAC TACTACCTGA ATGTGATTAT GATTTTTATG ACATGTCCCA GGTTGATGGT
CTTATTCGCC TCATGGAAGG GCCAAACACC GGGCCAATCA ACCTTGGAAA CCCCGGTTAG TTTCTACTGT AATACCTGTA
TTTGAGTTTT CTTAGTTCCT TAGTTGGGAA AGTATGTTTA CTTTCTCTGC ACCCAGTTAC TTACCAGAGT ACATTTACAT
TTCAGGTGAA TTTACAATGA TTGAACTTGC TCAGACTGTG AAAGAGGTAA GTTTTAAGCC TTTATTTTCT TTGCAAGCAG
CATTCAATTC TCCTTTTTTT ATTCACACGC TTGCTTTCAT CAAGTTCAAG CTGTGAGTAG TAAAATGTCG CTTGGAATCC
TTGGTTGCCC ATATCTGGCT ATTTCCTGGA GTAGAACAGC ATGTCCATAG TACCAAATCA ATAATACATC ATCATCTATA
TTTATGTGCA GTGTTTGAAT GAAAACATTT GCTAAAAGTT TTCATCTAAT GCTTTGTGAG TGGTTGCAGC TTATCAATCC
TGATGTTGAA ATCAAGATGG TGGAGAACAC TCCTGATGAT CCGAGACAAA GAAAACCAGA CATAACAAAA GCAAAAGAAT
TGTTGGGATG GGAGCCAAAG GTGAAGTTGA GGGATGGTCT TCCTCTTATG GAAGAAAATT TCCGTCTGAG GCTTGGAGTT
GACAAGAAGA AGTAGCTGAA TTTCTCTCCT TTGGTGGCAT GTCAAAAGTA GAAATAATAA GTGAAATGAG TCTGGCTGTT
TTCAAAACCT TCATCATTAT AGGTATTATG ATACTGAGAA CGTTGGGGTA CCTAAAATTT GGAGTCTATA GCTATCACAC
TGCTATATTT TGTTTTCATT TGGCAAAAGA CTACATCATG TCACTTCAAA TTTTGCGGGT TAAAAGACGA GTGAATTGAG
CTTTTTTTTT CCTGTATTCT GGTTATATTT TCAACTTTTC TTTCTTTAAA GTCTTGGAGA ACTGAGCTTT AGGATGTTAT
TTAGTGTGGA GTCATGCCAT TTACTTTGAA GTGAAACTGA TTCACAATAT CGAAATTCAT TTTATGTTGT ATAATTGACA
ACGATTGTTT TGTAATAAAG TTATGTTCAA GCTTCATTAT CATCTTGTCT GGTGTTGGAA GGAACTAATC TCAG

>Vigan.07G052400.01
TAGTAAATTA TAGTCATAGA AGCAAAATTC AATGTGGGGT TTGGTTTGGT TGTGTCGGGT TTGGTTTGGT TTTTCTTTTC
TGAATCTTTA CTGCAGAATA ATAGTTTGGT GTGATTTCCA TTACTATTGT CGTTGTCCAG GAGCTTTCAT TATGTCCTTC
AACTTTCCGT GACTTTCAAG CTTTCCAAAT TGAATTATGT TTCTCAGGGG GTAATTTTAT CTATTCTATG CTTAAAGTTT
TGATTTTTTT TTTATCAAAC TTCCAAATTG AATTTAGAAG TTTGGTGGAA TAATTTTTCA TATCTTGGTT GTCATTCATC
TATATAAATG GGTCTGCGAT CTTGCAGTAG TGGTAAGACA AGAGTGGTTA GGGTTTTGGT TTGGTGCTTT TGTGAAGCTA
TATATCTTGG TGTTCTTTTG AGATCAGGTG CTTGACTTGC TCTGTTACTT TCTTATTCTG ATTGCTTTTA ATGGCATTTG
TCACTCTTTT CCCTATTTGT TGCTCCAATT GACCCCTTTT AAATAGATAT CAGTTCACAT GATTTGGGTT GGGAAATTTA
TATCTTATTT AGTTTAAATG TTCTGTGCTA AGCATTGATC ACCCGAACAT TTGTGTAGGA ATTAATTTCT GAGGTCCAAA
CAATGGCAAC GGATTCTTCC AATGGTAATG GACATCACCA GACGACAACA TCAATAACAA CAACAAAGAC ACCTCCTTCA
CCATCTCCCC TGCGCTTTTC CAAATTTTTT CAGTCCAACA TGAGGATCTT GGTCACTGGA GGAGCTGGAT TCATTGGATC
TCACTTAGTT GACAGATTGA TGGAAAATGA AAAAAATGAG GTCATTGTTG CTGACAACTA CTTCACTGGA TCCAAGGACA
ACCTCAAAAA ATGGATTGGC CATCCAAGAT TTGAGCTTAT CCGTCATGAT GTCACGGAGC CTTTGCTGAT AGAGGTTGAT
CAGATCTACC ATCTTGCATG CCCTGCCTCT CCTATATTCT ACAAATACAA TCCAGTGAAG ACTATAAAGA CTAATGTCAT
AGGCACTCTC AATATGCTTG GGCTTGCAAA GAGAGTAGGA GCAAGGATTT TGCTTACATC AACTTCTGAG GTATATGGAG
ATCCTCTTGT GCACCCTCAA CCTGAAAGCT ATTGGGGAAA TGTTAACCCA ATTGGAGTCC GTAGTTGCTA TGATGAGGGG
AAACGGGTGG CTGAAACTTT GATGTTTGAT TACCATAGGC AGCATGGGAT TGAAATACGC ATTGCAAGAA TCTTTAACAC
ATATGGACCA CGCATGAATA TTGACGATGG GCGTGTTGTT AGCAATTTCA TTGCTCAAGC ACTTCGGGGG GAGTCCTTGA
CAGTCCAAAG TCCAGGAACT CAAACTCGAA GTTTCTGTTA TGTCTCTGAC CTGGTTGATG GTCTTATTCG CCTCATGGAA
GGGCCAAACA CCGGGCCAAT CAACCTTGGA AACCCCGGTG AATTTACAAT GATTGAACTT GCTCAGACTG TGAAAGAGCT
TATCAATCCT GATGTTGAAA TCAAGATGGT GGAGAACACT CCTGATGATC CGAGACAAAG AAAACCAGAC ATAACAAAAG
CAAAAGAATT GTTGGGATGG GAGCCAAAGG TGAAGTTGAG GGATGGTCTT CCTCTTATGG AAGAAAATTT CCGTCTGAGG
CTTGGAGTTG ACAAGAAGAA GTAGCTGAAT TTCTCTCCTT TGGTGGCATG TCAAAAGTAG AAATAATAAG TGAAATGAGT
CTGGCTGTTT TCAAAACCTT CATCATTATA GGTATTATGA TACTGAGAAC GTTGGGGTAC CTAAAATTTG GAGTCTATAG
CTATCACACT GCTATATTTT GTTTTCATTT GGCAAAAGAC TACATCATGT CACTTCAAAT TTTGCGGGTT AAAAGACGAG
TGAATTGAGC TTTTTTTTTC CTGTATTCTG GTTATATTTT CAACTTTTCT TTCTTTAAAG TCTTGGAGAA CTGAGCTTTA
GGATGTTATT TAGTGTGGAG TCATGCCATT TACTTTGAAG TGAAACTGAT TCACAATATC GAAATTCATT TTATGTTGTA
TAATTGACAA CGATTGTTTT GTAATAAAGT TATGTTCAAG CTTCATTATC ATCTTGTCTG GTGTTGGAAG GAACTAATCT
CAG

>Vigan.07G052400.01
ATGGCAACGG ATTCTTCCAA TGGTAATGGA CATCACCAGA CGACAACATC AATAACAACA ACAAAGACAC CTCCTTCACC
ATCTCCCCTG CGCTTTTCCA AATTTTTTCA GTCCAACATG AGGATCTTGG TCACTGGAGG AGCTGGATTC ATTGGATCTC
ACTTAGTTGA CAGATTGATG GAAAATGAAA AAAATGAGGT CATTGTTGCT GACAACTACT TCACTGGATC CAAGGACAAC
CTCAAAAAAT GGATTGGCCA TCCAAGATTT GAGCTTATCC GTCATGATGT CACGGAGCCT TTGCTGATAG AGGTTGATCA
GATCTACCAT CTTGCATGCC CTGCCTCTCC TATATTCTAC AAATACAATC CAGTGAAGAC TATAAAGACT AATGTCATAG
GCACTCTCAA TATGCTTGGG CTTGCAAAGA GAGTAGGAGC AAGGATTTTG CTTACATCAA CTTCTGAGGT ATATGGAGAT
CCTCTTGTGC ACCCTCAACC TGAAAGCTAT TGGGGAAATG TTAACCCAAT TGGAGTCCGT AGTTGCTATG ATGAGGGGAA
ACGGGTGGCT GAAACTTTGA TGTTTGATTA CCATAGGCAG CATGGGATTG AAATACGCAT TGCAAGAATC TTTAACACAT
ATGGACCACG CATGAATATT GACGATGGGC GTGTTGTTAG CAATTTCATT GCTCAAGCAC TTCGGGGGGA GTCCTTGACA
GTCCAAAGTC CAGGAACTCA AACTCGAAGT TTCTGTTATG TCTCTGACCT GGTTGATGGT CTTATTCGCC TCATGGAAGG
GCCAAACACC GGGCCAATCA ACCTTGGAAA CCCCGGTGAA TTTACAATGA TTGAACTTGC TCAGACTGTG AAAGAGCTTA
TCAATCCTGA TGTTGAAATC AAGATGGTGG AGAACACTCC TGATGATCCG AGACAAAGAA AACCAGACAT AACAAAAGCA
AAAGAATTGT TGGGATGGGA GCCAAAGGTG AAGTTGAGGG ATGGTCTTCC TCTTATGGAA GAAAATTTCC GTCTGAGGCT
TGGAGTTGAC AAGAAGAAGT AG

>Vigan.07G052400.01
MATDSSNGNG HHQTTTSITT TKTPPSPSPL RFSKFFQSNM RILVTGGAGF IGSHLVDRLM ENEKNEVIVA DNYFTGSKDN
LKKWIGHPRF ELIRHDVTEP LLIEVDQIYH LACPASPIFY KYNPVKTIKT NVIGTLNMLG LAKRVGARIL LTSTSEVYGD
PLVHPQPESY WGNVNPIGVR SCYDEGKRVA ETLMFDYHRQ HGIEIRIARI FNTYGPRMNI DDGRVVSNFI AQALRGESLT
VQSPGTQTRS FCYVSDLVDG LIRLMEGPNT GPINLGNPGE FTMIELAQTV KELINPDVEI KMVENTPDDP RQRKPDITKA
KELLGWEPKV KLRDGLPLME ENFRLRLGVD KKK*