GBrowse Details

Vigan.07G046200.01

Basic Information:
Name: Vigan.07G046200.01
Multiple alignment
Variant Information
Position: Chr07:3295785..3300642 (+ strand)
Length: 4858
Functional Information:
Description: Similar to MATE efflux family protein. [V7BWP1, Phaseolus vulgaris]
GO: Biological Process: drug transmembrane transport (GO:0006855)
Biological Process: transmembrane transport (GO:0055085)
Cellular Component: membrane (GO:0016020)
Molecular Function: drug transmembrane transporter activity (GO:0015238)
Molecular Function: antiporter activity (GO:0015297)
InterPro: Multi antimicrobial extrusion protein (IPR002528)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:16.11,107.28,17.76,15.15,7.01,6.28,3.23,17.59
Arabidopsis thaliana homolog: AT1G51340.2, AT3G08040.1
Automatic updates:
Name: NM_001251793 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max aluminum-activated citrate transporter (MATE), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr07:3295785..3296668 (+ strand)
Length: 884
Type: five_prime_UTR
Position: Chr07:3296669..3296745 (+ strand)
Length: 77
Type: CDS
Position: Chr07:3296976..3297097 (+ strand)
Length: 122
Type: CDS
Position: Chr07:3297504..3297713 (+ strand)
Length: 210
Type: CDS
Position: Chr07:3297866..3298056 (+ strand)
Length: 191
Type: CDS
Position: Chr07:3298191..3298326 (+ strand)
Length: 136
Type: CDS
Position: Chr07:3298426..3298522 (+ strand)
Length: 97
Type: CDS
Position: Chr07:3298689..3298789 (+ strand)
Length: 101
Type: CDS
Position: Chr07:3299143..3299306 (+ strand)
Length: 164
Type: CDS
Position: Chr07:3299599..3299670 (+ strand)
Length: 72
Type: CDS
Position: Chr07:3299752..3299868 (+ strand)
Length: 117
Type: CDS
Position: Chr07:3299958..3300053 (+ strand)
Length: 96
Type: CDS
Position: Chr07:3300136..3300257 (+ strand)
Length: 122
Type: CDS
Position: Chr07:3300335..3300380 (+ strand)
Length: 46
Type: CDS
Position: Chr07:3300381..3300642 (+ strand)
Length: 262
Type: three_prime_UTR

>Vigan.07G046200.01 class=Sequence position=Chr07:3295785..3300642 (+ strand)
TGCTAATTGA ACCTAGCACT CTCTCACTTT CTCACCTTCT CTTCTTCTCT GAGGTGCCCC GACAAACTCA CAGATCAACC
TAATTGGGCC CACATTATGT CTCTGTTCCA CTTTTTCTCC ACCACCACAG TCTTTCTACT TCCAACGTTT TCTCTTCTCT
TCTCGCTCTT CCATTATCAT TCTCGCATGC ATATTCTGTG ACACGCATCA TGCACTGATG TGCTACTTCT GTCGTTGTTC
GCTTCAACTT ACCGCTGCTT TTTTTCAAAG CTAGAATTAA ACGCCTTAAT GCGGAGTTTC AACCCTTTAA TTTCGTGTAA
CTGTGAGGCG AATCACGTTT TCGGGTGCGA CAAATAAGAG TTTTTGTTTC CCTGCATTTC TTATAATTGG TTGGTTTGGC
TTTCTTTCAA ACCCAAATTC CAAAGTTTGA ATTTTTAAGC TTAAGTAAGT GAGTTTAGGT GGTAAATGTC TCCTGTTCTT
GAGGGAAACT CACTTGACCG GAAGTCTCAT GTGGGTCAGT CTTTTCTGTG AACTTTTTTT AGCGTTTTAG TGCTACTTTC
ATTCTTTATT ATAGTTAGTG GCTTTTCTCA TAGTTAGTGA GAAGGACTAT TCTATGCAAT AGGGGAAGAA TATAAAAGGG
CATCTCCTTT GCCAACTTTT TATCACTGTG GAGTCTATCC CTATTCCATT ATGATTTGAC TTGATTGGCT GGTGTGTATT
TAACCACATA TATACCAAGT TCTTACGCAG CTTCTAAGCG TTAACGTTCA AGCGAAAACG TTATTGCATG TTTGATATCG
AAGCTCCTTC AGTATCCCTT CTGTTATGTA TCAGCAACCT CAATAAGTGC TCTTAAACAA CATAGTCAAT TCGGATTCCC
GAAGATGGCT GAGAAAGAGA CTATGTATTC ATTAGGTGAT TGGAGGAGAA TACCAATTTG CACTTTCTTT AAGGATGCAA
GGTATGATAT GTTTATGTTC TTGTAGCATT TCTGTACTGC TAGAACACAT CTGTCTGAAG ATCTTAAGTT TTAACTTCAA
AGGCCAAACG GATAGTGTTG TTCATTGAAC AGAAACTGCA AAGTTCACAT GCTTCTTCTT TTTTTCTGAA ACGTTCCATC
TGTTGTACGT ATTTTAATGA TGTTAGTTTC ACGGCTGTTA CGATGAACGC TAGGTTTTCT TCTATTTGCA GACTGGTTTT
CAAAGCAGAC AGTCTTGGTC GGGAAATTTT GTCAATTGCA TTGCCTGCAG CAATGGCTTT GACAGCTGAT CCTATTGCTT
CATTGGTTGA CACAGCATTT ATTGGCCAAA TAGGTATGTT CTGTTATTGG TTTATTATTT GAGCCCATTA TACACATCTC
TTGTTTCAAA CAATAGCTGT GCATGACAGT TTAAAGCAGC AACACTAGAA TTTTTCTTTA TCTATGGGCC ACGATGCTTC
AACTGACTTG CTTATCAACC TCGTTATATA AATGAGCTGT GTTTATTTTA TAACAGAACA GAACAAGAAA CATGTTAGTG
ACGAGGTAAC TGACCGAGGG TTGACTCATG AGGGATGATT GAATTAAAAA GATAGTTAAC AAGAAAATAG GGGTGGTATA
TTATCTATAG GAAAATGATA TATTGATCCT ACTTGGAAAT GAGAGGAAAA AACTCCAATG ATCAGAAGTA CTATACTTAC
ATGTATTTGA ATGCCTTCTG CAACTATTGG TCCATGCAGG GCCAGTAGAG CTTGCTGCTG TAGGAGTTTC AATAGCTCTC
TTCAATCAAG TATCAAGGAT TGCAATATTC CCACTTGTCA GTGTCACCAC TTCTTTTGTG GCTGAGGAAG ATACCCTTAG
TGGAGCAAGT CCTCAGATAG AGGAGGGTAA ATGCTTGGAA GCTGGTGGAC CTGTGGATAC TGAAACCAAA GAGTTATTAC
CACAGAGAGG TATCATACCA TTCTACCATT CTTTTGTAAT AGGTTTGGTT TCTGGCAAGT TTTCTTGGCT TCTGCTCAAG
AGCAATGAGC TATTGCTCTG TAGGAAAACC AATAAATGGT TTTGTGCATT TCCAACAAGA CCCTTTCACT TTCTTGGTCA
GTTACAGGTA GAAATGTTCG CAATTCAGAT TCTGTTGGTG AATCTTTGAA TATAGTTAAG GAGGATCACA AGAGAAGGCA
TATCCCTTCA GCTTCATCGG CATTATTTAT TGGTGGTGTC CTTGGCCTCA TCCAAGCAAT ATTTCTTATA TCTGCCGCAA
AACCTTTATT GAACTTCATG GGAGTAACTT CTGTAAGTAC CATAGTTTTA AGGAATGTTA CTTTTTGGAT TATAGCACTT
TGGTGTTTAT TTTAACTTGT TCCTTTAGTG GTTTGATCTT ATTTGAGCAT AGGATGAGTG CCAAGTAATA TATATTATTT
ATGCAGGACT CTCCTATGCT ACACCCTGCA CAACAGTATC TGAGATTGAG GTCCCTCGGT GCTCCTGCCG TTCTTCTCTC
CTTGGCAATG CAAGGAGTGT TCCGAGGATT TAAAGACACG AAAACACCTT TATATGCCAC TGGTATACCT TGACAAACTA
AAATTATCAT TGATTAAGTG TCACCAATCA CAATTTCCTG CTATTATCTG ATTCTAATTA CCCTTTCCTT GATGTATGCA
GTTGCAGGAG ATGCAACTAA CATAGCATTG GATCCTTTAT TCATGTTTGT ATTCCGCTTG GGTGTCAGTG GTGCAGCCAT
TGCCCACGTT ATATCTCAGT ATGTTTTATT TAACTGTAAT TCAAATGCTT TGATTATACC GTTGTTACAA GTATGGAAGA
CTCTGCAAAG TACCTTTATG CAGACCTATC TTATAAGTTG CATTGTGCTT TCCGTTTGCA TCTTTTAATA CTAATCATCC
TTTATTTTCA AATTAACTGT GTAGGTACCT AATTTCAGCT ATACTCCTAT GGAGGTTGGT GCAACAAGTT GACCTTATAC
CTCCGAGCAT AAAACATCTG CAATTAGACC GTTTTCTTAA AAATGGTAAG AGTTTATTGT GCCTGACCAA ATTATGTACA
AAAAATAAGA ACTGAGGAAG GAGGAAGAAG CCATGCTAGT TTCTTGTGTT ATGTTTAAAC CATAATGAAA ATTATTTACT
AAAGATGCAG TATCTATTTC CTAGCAATAT TAAATAAACA GTACCTTATT TCATTTTATT GAATCCTAAA TTTCGCGGAG
TCAGAATTTT CTTATAGAAA TTTCTGTGGT GCTTTATTTT ATCTTTTTCA TTCAAATTGA TACTTCTACT AATGGTTTTC
TAATAGATTA ACAACTAACA CTTCAGGATT GAGACTTACA CCTTTGTTTG TCTTTCGTAT TGTATTGTTG TCAACCAGGT
TTTCTATTAC TAATGAGAGT AGTCGCTGTA ACATTTTGTG TGACATTGGC TGCATCATTA GCTGCACGGC AAGGATCAAC
GTCCATGGCT GCATTTCAAG TCTGTCTGCA GGTTTGGTTG GCAGTGTCTC TTCTTGCTGA TGGTCTGGCA GTTGCAGGGC
AGGTTAGATA TAACTACTGT CCAATAAATG CCTTGCTATG TTGCTTCATG ATGGTTTCAT ACCAAAACAT TGTCTAAAAA
ATATCAATGA CCTCAACTTT AATAATACTT TATTGTATGA GAAAAACGGT TAAATGTGAA CAGAAAAGTG ATTAAATTTG
AAAGAGATTG TTTTGGTATG AAATGAACTA TAGAAACTAT ATTATCACAT GTTTTCTGCT AACTGAATCT TATTACATGC
TTATAGTACT CCAAGTTCTT GGTAAAATGC CATTTACCAT CATGTTGGTT TCAGGCTATT CTTGCTGGTG CATTTGCTAA
TAAGGACTTC AACAGGGCAT CGGCAACTGC ATCCCGAGTT GTGCAGGTGC TTTAGAATAA TGATAAATGA AATGCTCATC
TTTCACAAGA CATATATTTT GTAATGTGAC ACACTATTAT ACTGCAGATG GGTTTAGTTC TAGGATTGGC ACTTGCATTC
ATTCTTGGAA CAGGATTGCA CTTTGGAGCT AAAATATTTA CAAAAGATGC TGATGTTCTC CACCTCATTC AAATTGGAAT
CCCGGTAATT ATTGGTTTTC AAATTAGAAA GAATATTGTT AATCTATCTT TCCAACCCCA GGAGACTCAC TTTCATGTTC
ATTCTTTTAC CAGTTTGTGG CAGTCACTCA ACCTTTGAAT TCTTTAGCAT TTGTATTTGA TGGTGTCAAC TTTGGAGCTT
CTGATTTTGC ATATTCAGCC TTCTCCATGG TGGGTTTCTC TTCCATGTTT TAATGTTTGA TATTATGATA AATAACATTC
AAGGGCTTTA TTTAATTGTG GTAACTCTCA GGTTGTGGTG GCAATTCTAA GCATTATTTG TCTGCTTATT TTGTCATCCG
CGGGTGGTTT CATTGGTATT TGGGTTGCTT TGACCATCTA TATGGGTCTT AGGGCATTTG CTGGCTTCTT GAGGTAATAA
TGAATTTCAA GAGTTATTAT TCCTAATGTT TTCTTCCTAA TTGACTAATC AATTAAATAT GTTGATGCAG GATTGGAACA
GGATCAGGAC CGTGGGAGTT CCTAAGGAGC TCATAATAAC TGCACATAAG CCTATAGGTT GCAGTGGTAG TTACTAATTA
CATTTAAGTG AGAAGCTTTC CCTGGGTTTT TTTAGTAGCT TGCAAATTCT TCTGAAAGAA TAGGCACTCG TTGAAAAATC
TAACTCTACT TCATAATATG TACATAGAAA GTCTCTGTAC TCAGTCTCGT ATATATATGA AATGAAATAT AGAATCAAGC
TTTTGTTTGC AACAAATACA ACGTAAAAAT GTAAAGATTG CAGGGAACAA TCACTGGT

>Vigan.07G046200.01
TGCTAATTGA ACCTAGCACT CTCTCACTTT CTCACCTTCT CTTCTTCTCT GAGGTGCCCC GACAAACTCA CAGATCAACC
TAATTGGGCC CACATTATGT CTCTGTTCCA CTTTTTCTCC ACCACCACAG TCTTTCTACT TCCAACGTTT TCTCTTCTCT
TCTCGCTCTT CCATTATCAT TCTCGCATGC ATATTCTGTG ACACGCATCA TGCACTGATG TGCTACTTCT GTCGTTGTTC
GCTTCAACTT ACCGCTGCTT TTTTTCAAAG CTAGAATTAA ACGCCTTAAT GCGGAGTTTC AACCCTTTAA TTTCGTGTAA
CTGTGAGGCG AATCACGTTT TCGGGTGCGA CAAATAAGAG TTTTTGTTTC CCTGCATTTC TTATAATTGG TTGGTTTGGC
TTTCTTTCAA ACCCAAATTC CAAAGTTTGA ATTTTTAAGC TTAAGTAAGT GAGTTTAGGT GGTAAATGTC TCCTGTTCTT
GAGGGAAACT CACTTGACCG GAAGTCTCAT GTGGGTCAGT CTTTTCTGTG AACTTTTTTT AGCGTTTTAG TGCTACTTTC
ATTCTTTATT ATAGTTAGTG GCTTTTCTCA TAGTTAGTGA GAAGGACTAT TCTATGCAAT AGGGGAAGAA TATAAAAGGG
CATCTCCTTT GCCAACTTTT TATCACTGTG GAGTCTATCC CTATTCCATT ATGATTTGAC TTGATTGGCT GGTGTGTATT
TAACCACATA TATACCAAGT TCTTACGCAG CTTCTAAGCG TTAACGTTCA AGCGAAAACG TTATTGCATG TTTGATATCG
AAGCTCCTTC AGTATCCCTT CTGTTATGTA TCAGCAACCT CAATAAGTGC TCTTAAACAA CATAGTCAAT TCGGATTCCC
GAAGATGGCT GAGAAAGAGA CTATGTATTC ATTAGGTGAT TGGAGGAGAA TACCAATTTG CACTTTCTTT AAGGATGCAA
GACTGGTTTT CAAAGCAGAC AGTCTTGGTC GGGAAATTTT GTCAATTGCA TTGCCTGCAG CAATGGCTTT GACAGCTGAT
CCTATTGCTT CATTGGTTGA CACAGCATTT ATTGGCCAAA TAGGGCCAGT AGAGCTTGCT GCTGTAGGAG TTTCAATAGC
TCTCTTCAAT CAAGTATCAA GGATTGCAAT ATTCCCACTT GTCAGTGTCA CCACTTCTTT TGTGGCTGAG GAAGATACCC
TTAGTGGAGC AAGTCCTCAG ATAGAGGAGG GTAAATGCTT GGAAGCTGGT GGACCTGTGG ATACTGAAAC CAAAGAGTTA
TTACCACAGA GAGTTACAGG TAGAAATGTT CGCAATTCAG ATTCTGTTGG TGAATCTTTG AATATAGTTA AGGAGGATCA
CAAGAGAAGG CATATCCCTT CAGCTTCATC GGCATTATTT ATTGGTGGTG TCCTTGGCCT CATCCAAGCA ATATTTCTTA
TATCTGCCGC AAAACCTTTA TTGAACTTCA TGGGAGTAAC TTCTGACTCT CCTATGCTAC ACCCTGCACA ACAGTATCTG
AGATTGAGGT CCCTCGGTGC TCCTGCCGTT CTTCTCTCCT TGGCAATGCA AGGAGTGTTC CGAGGATTTA AAGACACGAA
AACACCTTTA TATGCCACTG TTGCAGGAGA TGCAACTAAC ATAGCATTGG ATCCTTTATT CATGTTTGTA TTCCGCTTGG
GTGTCAGTGG TGCAGCCATT GCCCACGTTA TATCTCAGTA CCTAATTTCA GCTATACTCC TATGGAGGTT GGTGCAACAA
GTTGACCTTA TACCTCCGAG CATAAAACAT CTGCAATTAG ACCGTTTTCT TAAAAATGGT TTTCTATTAC TAATGAGAGT
AGTCGCTGTA ACATTTTGTG TGACATTGGC TGCATCATTA GCTGCACGGC AAGGATCAAC GTCCATGGCT GCATTTCAAG
TCTGTCTGCA GGTTTGGTTG GCAGTGTCTC TTCTTGCTGA TGGTCTGGCA GTTGCAGGGC AGGCTATTCT TGCTGGTGCA
TTTGCTAATA AGGACTTCAA CAGGGCATCG GCAACTGCAT CCCGAGTTGT GCAGATGGGT TTAGTTCTAG GATTGGCACT
TGCATTCATT CTTGGAACAG GATTGCACTT TGGAGCTAAA ATATTTACAA AAGATGCTGA TGTTCTCCAC CTCATTCAAA
TTGGAATCCC GTTTGTGGCA GTCACTCAAC CTTTGAATTC TTTAGCATTT GTATTTGATG GTGTCAACTT TGGAGCTTCT
GATTTTGCAT ATTCAGCCTT CTCCATGGTT GTGGTGGCAA TTCTAAGCAT TATTTGTCTG CTTATTTTGT CATCCGCGGG
TGGTTTCATT GGTATTTGGG TTGCTTTGAC CATCTATATG GGTCTTAGGG CATTTGCTGG CTTCTTGAGG ATTGGAACAG
GATCAGGACC GTGGGAGTTC CTAAGGAGCT CATAATAACT GCACATAAGC CTATAGGTTG CAGTGGTAGT TACTAATTAC
ATTTAAGTGA GAAGCTTTCC CTGGGTTTTT TTAGTAGCTT GCAAATTCTT CTGAAAGAAT AGGCACTCGT TGAAAAATCT
AACTCTACTT CATAATATGT ACATAGAAAG TCTCTGTACT CAGTCTCGTA TATATATGAA ATGAAATATA GAATCAAGCT
TTTGTTTGCA ACAAATACAA CGTAAAAATG TAAAGATTGC AGGGAACAAT CACTGGT

>Vigan.07G046200.01
ATGGCTGAGA AAGAGACTAT GTATTCATTA GGTGATTGGA GGAGAATACC AATTTGCACT TTCTTTAAGG ATGCAAGACT
GGTTTTCAAA GCAGACAGTC TTGGTCGGGA AATTTTGTCA ATTGCATTGC CTGCAGCAAT GGCTTTGACA GCTGATCCTA
TTGCTTCATT GGTTGACACA GCATTTATTG GCCAAATAGG GCCAGTAGAG CTTGCTGCTG TAGGAGTTTC AATAGCTCTC
TTCAATCAAG TATCAAGGAT TGCAATATTC CCACTTGTCA GTGTCACCAC TTCTTTTGTG GCTGAGGAAG ATACCCTTAG
TGGAGCAAGT CCTCAGATAG AGGAGGGTAA ATGCTTGGAA GCTGGTGGAC CTGTGGATAC TGAAACCAAA GAGTTATTAC
CACAGAGAGT TACAGGTAGA AATGTTCGCA ATTCAGATTC TGTTGGTGAA TCTTTGAATA TAGTTAAGGA GGATCACAAG
AGAAGGCATA TCCCTTCAGC TTCATCGGCA TTATTTATTG GTGGTGTCCT TGGCCTCATC CAAGCAATAT TTCTTATATC
TGCCGCAAAA CCTTTATTGA ACTTCATGGG AGTAACTTCT GACTCTCCTA TGCTACACCC TGCACAACAG TATCTGAGAT
TGAGGTCCCT CGGTGCTCCT GCCGTTCTTC TCTCCTTGGC AATGCAAGGA GTGTTCCGAG GATTTAAAGA CACGAAAACA
CCTTTATATG CCACTGTTGC AGGAGATGCA ACTAACATAG CATTGGATCC TTTATTCATG TTTGTATTCC GCTTGGGTGT
CAGTGGTGCA GCCATTGCCC ACGTTATATC TCAGTACCTA ATTTCAGCTA TACTCCTATG GAGGTTGGTG CAACAAGTTG
ACCTTATACC TCCGAGCATA AAACATCTGC AATTAGACCG TTTTCTTAAA AATGGTTTTC TATTACTAAT GAGAGTAGTC
GCTGTAACAT TTTGTGTGAC ATTGGCTGCA TCATTAGCTG CACGGCAAGG ATCAACGTCC ATGGCTGCAT TTCAAGTCTG
TCTGCAGGTT TGGTTGGCAG TGTCTCTTCT TGCTGATGGT CTGGCAGTTG CAGGGCAGGC TATTCTTGCT GGTGCATTTG
CTAATAAGGA CTTCAACAGG GCATCGGCAA CTGCATCCCG AGTTGTGCAG ATGGGTTTAG TTCTAGGATT GGCACTTGCA
TTCATTCTTG GAACAGGATT GCACTTTGGA GCTAAAATAT TTACAAAAGA TGCTGATGTT CTCCACCTCA TTCAAATTGG
AATCCCGTTT GTGGCAGTCA CTCAACCTTT GAATTCTTTA GCATTTGTAT TTGATGGTGT CAACTTTGGA GCTTCTGATT
TTGCATATTC AGCCTTCTCC ATGGTTGTGG TGGCAATTCT AAGCATTATT TGTCTGCTTA TTTTGTCATC CGCGGGTGGT
TTCATTGGTA TTTGGGTTGC TTTGACCATC TATATGGGTC TTAGGGCATT TGCTGGCTTC TTGAGGATTG GAACAGGATC
AGGACCGTGG GAGTTCCTAA GGAGCTCATA A

>Vigan.07G046200.01
MAEKETMYSL GDWRRIPICT FFKDARLVFK ADSLGREILS IALPAAMALT ADPIASLVDT AFIGQIGPVE LAAVGVSIAL
FNQVSRIAIF PLVSVTTSFV AEEDTLSGAS PQIEEGKCLE AGGPVDTETK ELLPQRVTGR NVRNSDSVGE SLNIVKEDHK
RRHIPSASSA LFIGGVLGLI QAIFLISAAK PLLNFMGVTS DSPMLHPAQQ YLRLRSLGAP AVLLSLAMQG VFRGFKDTKT
PLYATVAGDA TNIALDPLFM FVFRLGVSGA AIAHVISQYL ISAILLWRLV QQVDLIPPSI KHLQLDRFLK NGFLLLMRVV
AVTFCVTLAA SLAARQGSTS MAAFQVCLQV WLAVSLLADG LAVAGQAILA GAFANKDFNR ASATASRVVQ MGLVLGLALA
FILGTGLHFG AKIFTKDADV LHLIQIGIPF VAVTQPLNSL AFVFDGVNFG ASDFAYSAFS MVVVAILSII CLLILSSAGG
FIGIWVALTI YMGLRAFAGF LRIGTGSGPW EFLRSS*