GBrowse Details

Vigan.06G262900.01

Basic Information:
Name: Vigan.06G262900.01
Multiple alignment
Variant Information
Position: Chr06:38252160..38258591 (+ strand)
Length: 6432
Functional Information:
Description: Similar to Uncharacterized protein. [I1L5N2, Glycine max]
GO: Biological Process: chromatin organization (GO:0006325)
Biological Process: developmental process (GO:0032502)
Cellular Component: nucleus (GO:0005634)
InterPro: Actin-related protein (IPR004000)
Actin-related protein 7, plant (IPR027678)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:76.03,34.48,12.31,33.55,9.60,13.43,14.90,17.56
Arabidopsis thaliana homolog: AT3G60830.1
Automatic updates:
Name: NM_001254458 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max actin-related protein 7-like (LOC100813266), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:38252160..38252359 (+ strand)
Length: 200
Type: five_prime_UTR
Position: Chr06:38252360..38252437 (+ strand)
Length: 78
Type: CDS
Position: Chr06:38253655..38253870 (+ strand)
Length: 216
Type: CDS
Position: Chr06:38254117..38254258 (+ strand)
Length: 142
Type: CDS
Position: Chr06:38255062..38255306 (+ strand)
Length: 245
Type: CDS
Position: Chr06:38255915..38256098 (+ strand)
Length: 184
Type: CDS
Position: Chr06:38257864..38257931 (+ strand)
Length: 68
Type: CDS
Position: Chr06:38258065..38258217 (+ strand)
Length: 153
Type: CDS
Position: Chr06:38258218..38258591 (+ strand)
Length: 374
Type: three_prime_UTR

>Vigan.06G262900.01 class=Sequence position=Chr06:38252160..38258591 (+ strand)
ATTATATAGA AACATATTAT GTTATTTAGT GGAAAAAAAT ATATCATGCT TGAGAAATAA GAGTGTTGAT ATGATAATTG
AGTGTGACTG AGAGGCTTAG AAGGAAGAGA GGTTGAAGTG AAGGAAGAAG CGAAGAGGTT GTTTGTTAAG GAGAGAAGAT
TCAGATTAGG GATTAGGGTT TAGTTTCAGT TAAGGAAGCG ATGGAAGCGG CGGTGGTGGA CGTCGGTTCT AAGCTTCTCA
AAGCCGGTTT TGCAATTCCC GACCAGACTC CGGCCATGGT TTCCTTTCAT TCCTCTCTCT CTCTCTCTCT CTCTCTATAT
ATATATATAT ATATATATAT ATTTGTGATG ATAATAATCT AAGAATAGGG TTTTGCAAAT GCTATCTATC TTCACTGATA
TGGACGGATA CTTATAATAA TAATTGATAC ATATATAGAT ACAATAATAT AGCACGTGTA CTTGAAATAA TAGTCATAGA
GATTTGAATT CCCGTCTTCC AGCTGGAACA ATTTGGCGGT AAGTGAACAT GATTATCTCT GAGAGCTTGC GTCTCGCTTG
CTATGGAATT ATTTTGCGAG GGCGAGAGTA AGTAAATTTT GCTTAATGAA ATAGACAATT TATAATCTCC AGCAGTGTAT
AGGACCTCTC GGTGGACTCT TGGTTATAGT TCATGAATCT CTTATTATCA TGAAAAGTTT TTATGATATT CAGATATGTA
AGTAGTCAGG GATGAACCGA TTGCTATAGT AATTCGAGAG GAGGAGTTGA TTCAGAAAGT TAAAATTCTT CTACTTTAGG
CTCTAAAGGT GCTAAGAAAT TCAATTTGAA AGGAAAATAA AAAAAGGATG AAAGAAAGGT AGCACAACAT GTGAGGTTTA
GTAGAAGCAT CCAATTGGAT GCTATGGGTA TTAGCTTTCT TCATTGACTT CTACTCTCCA GTGACTATAG CAAGCTTTAC
CGATCACTAA TGTCTTTGAA TATTATGAGG TCGTCATGAT ATCAAAGTGT GAAGGCATAG ATTCAAGATG TATGGTTAAT
AGCTCATTGA GAGGTTCTTA TTTACTGCTG CTGGGTGTTA TAAATTTTCT ATCTCATCGA ACAAATTTAC TTTCTCCCAC
TCACAGAATA ACTTAATAGA AAGTGGGCAG AAAGCTCTGA AGACTAATAA GTGGTCTATC ACCACCAAAC TGTTACCATT
TGAAAAAAAA CATGAATTAA GGTGAGCATT CAAATCTCTT TAATTATTAA TGCAATTATC TAGACTATTA GAGTATTGTA
TCTACGTGTG AGGATATACA TTATTGTTAT TATCTGTCAT AAACTAGACT ATATGCATGG AAAATCTCCA CACTTTGAGA
GATTTCATCT CCTTTAATGC ATAATTCTAA TCCACTGTAC AATTCTCAAG TATAATATTT GACTCACATC CATCTCGTCA
ATTTTAGTTT CCAACTATCT CAGAATGCCT CATTGAGCCT CTTTGTGTGA CTCAGATAAT TCCCACTAAA ATGAAACAAC
TGCTTGATGA TGGATCGGCC ACTGATAGCT CACTGGCTGA AAATGTCACT GTTGATCCAG TTGTGCGGGG ATTTATTAGA
GATTGGGATG CCATTGAGGA TTTGTTGCAG CATGTTTTAT ATACTGGTCT GGGATGGGAA ATTGGCAATG AAGGTCAAAT
ACTCTTTACA GATCCACTTT GTACCCCAAA GGTTTCTCAA ACTTGCTTGC TTTCTCTTTT CCTGTACACG TTCATTCCTA
GATATCCTTT TTCTATATAA GAATATGAAT ATGTATTATT CTTTGCTAGT TTTTTGTTTC CTTTCTACCT ATCTGAACTA
ATCAGGCAAC CTTTTGTTAA ATGGAATTGC CACTAATAAG TTAGTATTAT TGTTTTGCTA GTGTTATATA TATCTTTTCT
CAACTAGTAT ATATGTTATT GTTTTCCAAC TTTCCAGGCC AACAAAGAAC AGTTGGTGCA ATTAATGTTT GAAACATTCA
ACATATCAGG GTTTTATGCT TCAGAACAAG CAGTGTTATC ACTGTATGCT GTGGGACGTA TCTCAGGCTG CACTGTTGAT
ATTGGACATG GAAAAATAGG TATCCACGCC AGAAACAATG GGAACTTTAC TTGAATTGTG CAAATAGTGT CTGCATTGAA
TACATGGATG CTTTCAACTG CATGCTGTGT GAATCAAGCT GTCTATTTTT GATGTGGGAG TATGTTACCT CTAGCACTTA
GCATGACGTG TTCTTGTACC ACAGGGTCTG TGGGTAACAA GATATCTGAC GGCCTGCCTT TTTGTTTTAG CTACAGAGTA
ACGAAATAAT GATTTATTAA TTTTCTTTAT CTAATCTCAA TAGTAAAATT AAATATCATC AGCATATAAT AAGTCCACTT
GAAATTTAAC AGATTCAAAA TGATGAAACA GTTATTCTCC ACTTCTTATA TTCCAACCTG TGTATATTCC TTATGTGTTA
CCCATTCTAC CTCCCTTTTA TGCAGCTTCA TGTTTGAATG GAAGGAATCA TGTGCTGAGG ATCTTACCAA ATAACATAAC
CTAGGTTCCT AGTATGAATT TATTGAAGTT TCACTCTTCC ACCCAGCCAG TATTTTTTTG GTACATCTTG TTTTCCTAAT
GGAATCAAAT TGAAAGACGA CGCTAGTTTT CCTTAATGGA GCAAGGAAAA TATTTAAAAT TTATTGAAAA AGAAAGTTAA
ATACTCCCAA GATTAATACA TTTCAATTAC AACTTTTCTG ATACTCTCTA TTTTTTAAAC TAAACTAGAT AGTGTTCCAG
TAATGAATGG ATGGATGTCT GCTGAGTGTT TGTCTTCAAA TATGAACATA TTTTTGAGCT TATTTGTTGT TATATGTATC
ATTATTTTTT TTATGTGCCT AGATATTGCA CCAGTAATTG AGGGTGCTGT TCACCATATT GCCTCAAGAA GATTTGAATT
TGGAGGTATT GATCTAACTA ATTTCCTAGC TCAAGAACTA GGCAAGACCA ATCCAAAAGT AAATATCAGC CTGTCTGATG
TGGAGAAAAT GAAAGAGCAG TACTCATGCT GTGCTGTAGA TGAGTTAGCT TATCAAAAGA CCCAATATTT GTGTCCTGTG
GAGGAGCATA CCCTTCCTGA TGGACAGGTC TGCTTTCTTA ATTCCTATGA TAGTTTTGAC TAGCAATACT GATTGATAGA
AGGGAAGTAA AAGAAAATGA AAGAAAAGGT GAGATTAAGA ATCAGTAAGC AGAGAATTGA TTGATTTAAG CAAAACTTAT
GATGTGGTGA CTGATGTTAC ATTGGAGTAC ATTCTGTTTT CAACTTTCTG TGATTTACCA ATTAAAATGT GATATTTTTA
GCTTATCATG CAGCTTTCTT TTATTATGTT ATAAAATATT TTAATAGCCT TTTGGTGAAA CCCTTTGTAA GTTCTCTGCA
TGCTCAAACT GTTAAAAGTT GTATCAGTAA TTTTCACATT CCACAAGGAG AGGCTGTGTA CCAGTTTGTC TTCCTGAGGA
TGTTGAGTTG GCTCTATTTA ATGGTTCAGC TGCTTTTGTG TCTCAAAATT CTGGACCAGC CTGAAGGTTA TATAATTTTT
TAGACAAACA GGCTGGTTTG ATAGGATAAA AATTACCAGA AAATCAACAA CATTTGTTCC TTCACCCCAG TGTCAACAAT
GTGTGTTTAT ATTTAAGTTC TGTAAATGCA TCTTCAATAA TTTATTACTT ATCTGAAAGT TGAATTATAT TATAGGTGAT
AAGAATTGGG AGAGAAAGAT TTACGGTCGG GGAAGCTTTA TTCCGGCCAT GTCTATTGGG TTTAGAGGCT CATGGCATTG
TTGATCAGCT TGTCCGTGCT ATTTCAACTG TGTCATCTGA TAATCAACGA CAGCTGCTGG AGAATACGGT GGTTTGTGGT
GCCACTTCAT CTATGGCAGG TACATTTTTG TCTGCATCAG TTCTGGTGAA TTTAGGATAA GCTTGATATG AAGTTCTATT
TTGTTATGCT TTTTGTTGTT TTTCCATCTA AAGACAATGT GCTTATATTT GGTTTGTCCA TCAATATCTT TTAATTGTTA
TATCTTCTAC TTTGAATGTA AGGGATCCTA CTTCCTTTTA GATTAGAGTA GAATATAACC TAATATTCGA CAAATAAATT
CATATCATTT AGTTAGAAAC TATGATACAT ACGGCTATTT GTCTCATCCT TGAAAATATA GGACACGATT GGTTGAGATA
TGTTTAAACA TATATGCATA TATATAGTTC GCAAAATAAA ATAAATATTA TTATATTTTT TAAAGAACAT ATTAAAATTG
AAAATTACTA AATATTGTCT GATGTATATA TAAATGGTGA GTGAGAATTG TTTCTATCTA CATTTTGTGT CAAGTGTTTT
TTAATTATGT GGTATTCAAA TATCAAATCC TGAAAATGGT TTGCTGGAAT AAATCATAAA AATTATATAT TTTATGTTTG
TTTAATGTTT GGAATAATAT AAAAAAATTA AAAATAATGA TAGTTAAGCA CTAAAACGAA AAAAATGACT ACAAAAAAAA
TTGTGACTGT TATATATATT AGTTGAATGT TAAATCTAAG GCTAGTTTAG GAAAATCGAA TAGTGTGGGA TCTTGGGGTG
TGTTGTCTTG TACAACATGA GTAATAAAGT CTTACCCAAA GGACAATACA AATTCATAAA ACAAGATTAT TAACTGTACA
CCATCAAGTA ATACTGTTAG CTTCTTAGCT CTTTTTTAAG TACTTTTTCT TATCATTTTT AACTGCTTAT TAACACTTTA
CTGATACGTA ATTTTTAAGT GTATACAAAC GTATCTGTGT CGGGTATGTC GTAGACACGA ACGGATACAC AGGCCTGATC
CATGTATTAG TGAATCACAG GTTAGTAACT TGGATAGGAG CCAATAAAGT TTGAAATTTA ACAAACTTCT CAAATCACAG
AAATTAGTAA TTAGACTCGG GAATTCAGAA GAAAGTTAGA AATCACTGAA TAAAAAGGTG ACCTAGTGCA CGAGGTTCCC
ACAAAGCTGG GTTTTTGCGA GGATAGATGA ACATAGAATC TTGGCAAGTG GAAAGGCTGT TTCTAGGATT TCATATGTAA
ACTCCTGCTC ACAAGGTTGT TCTTACTACT ATTTCATTAA GGGCTTCCCT GAAATTACAC GGCATGCAGG CTAGTCATTA
TATTTTCAGC TCCCTGTTCT CTTCCTCTCA TCCATTACAT TCCTCACTTG GTCCTGCAGT GTCCAACAAA GCTGTATGGG
GCTTCCTAAC GTATTTTTGA AATAATATTT ATATATGGAA ATTCTAATAT GAACTTTTCT GGTGGAATTT CCTTTAGGCC
ACAATAAAAT ATGATAAACC GTTTTAATTG TGTATGCTTA ATATTTGCGT ATTGAGGTAG AAATGCGTCT TTTATATTCC
CTTTTTTCTT TATTTCACAG AGTCTGGATT TACTTCCCTA CTTTTATAAA TAGTTATTAT ATGGAATTTA AGTTTTACAT
TTATTTGCCG ATGGAATTTA GGTGTTTATT TATTGCCAGT GAACTCTAAC TATGTTTTAC ATCAAGATAT TCATATTTCT
ACTGACAATA TTGGCTTTAT CTTACACCAC TTAAATTTCC TATCTATGCC AATGCTGTTT CTTATTTACT TCTGACGGGC
TAATACCCCA CTTCTCATTG CCAGGTTTTG AAGAGAGATT TCAAAAAGAA TCTAGCTTAA GTTCATCTGC CGTTCAACCT
ACCCTTGTTA AGGTAATTTG GTTATCTAGT AAAGTGACTT GAAATTTATA ACAACTTAAA ATAACGTTAA AAACCTTAAA
GATACTATTA GTATTCATGT TTTAACTAAT CTTGCCACTG GTGGATAATC TCTGGCTTAT TGCAGCCTCC AGAATACATG
CCAGAAAATT TAACCATGTA TTCTGCATGG GTGGGAGGTG CAATACTTGC GAAAGTCGTT TTCCCTCAAA ATCAGCATAT
AACCAAGGCA GACTATGATG AAACCGGACC TTCCATTATT CACCGGAAAT GCTTCTGAAA TTATTCATCT CCAGGATTTC
AACAATTGTT TATTCCGCTG CTTGTACCGG TACTGTAACA TATCGTATCC TGTAGATTTT AAATGCTTGA TGTCCATGTG
CGTGTATATT GTAAAAGCTG TAGCAATCTC CATTAAGGCA ATCTTCTCAC TTTTTCTCCC CTCCAAAAAA ATTCTTCTCA
CCATCGTGAG TTCCTAAGTT GCAGTAGAAG ATTTCCATGA ATACTTGTTC CTCAGAAATG TATATATGTG GAAGCTTGCA
TATCTTTTGC AATGTGGATA TCCTTGTAAA ATATTCATTT CTTTGTAACC TTGTAGGCTG TGGCTACTGG CTACATCCCT
TCTAGTAGAA CCCCTTGTTC CTATAATAGT TT

>Vigan.06G262900.01
ATTATATAGA AACATATTAT GTTATTTAGT GGAAAAAAAT ATATCATGCT TGAGAAATAA GAGTGTTGAT ATGATAATTG
AGTGTGACTG AGAGGCTTAG AAGGAAGAGA GGTTGAAGTG AAGGAAGAAG CGAAGAGGTT GTTTGTTAAG GAGAGAAGAT
TCAGATTAGG GATTAGGGTT TAGTTTCAGT TAAGGAAGCG ATGGAAGCGG CGGTGGTGGA CGTCGGTTCT AAGCTTCTCA
AAGCCGGTTT TGCAATTCCC GACCAGACTC CGGCCATGAT AATTCCCACT AAAATGAAAC AACTGCTTGA TGATGGATCG
GCCACTGATA GCTCACTGGC TGAAAATGTC ACTGTTGATC CAGTTGTGCG GGGATTTATT AGAGATTGGG ATGCCATTGA
GGATTTGTTG CAGCATGTTT TATATACTGG TCTGGGATGG GAAATTGGCA ATGAAGGTCA AATACTCTTT ACAGATCCAC
TTTGTACCCC AAAGGCCAAC AAAGAACAGT TGGTGCAATT AATGTTTGAA ACATTCAACA TATCAGGGTT TTATGCTTCA
GAACAAGCAG TGTTATCACT GTATGCTGTG GGACGTATCT CAGGCTGCAC TGTTGATATT GGACATGGAA AAATAGATAT
TGCACCAGTA ATTGAGGGTG CTGTTCACCA TATTGCCTCA AGAAGATTTG AATTTGGAGG TATTGATCTA ACTAATTTCC
TAGCTCAAGA ACTAGGCAAG ACCAATCCAA AAGTAAATAT CAGCCTGTCT GATGTGGAGA AAATGAAAGA GCAGTACTCA
TGCTGTGCTG TAGATGAGTT AGCTTATCAA AAGACCCAAT ATTTGTGTCC TGTGGAGGAG CATACCCTTC CTGATGGACA
GGTGATAAGA ATTGGGAGAG AAAGATTTAC GGTCGGGGAA GCTTTATTCC GGCCATGTCT ATTGGGTTTA GAGGCTCATG
GCATTGTTGA TCAGCTTGTC CGTGCTATTT CAACTGTGTC ATCTGATAAT CAACGACAGC TGCTGGAGAA TACGGTGGTT
TGTGGTGCCA CTTCATCTAT GGCAGGTTTT GAAGAGAGAT TTCAAAAAGA ATCTAGCTTA AGTTCATCTG CCGTTCAACC
TACCCTTGTT AAGCCTCCAG AATACATGCC AGAAAATTTA ACCATGTATT CTGCATGGGT GGGAGGTGCA ATACTTGCGA
AAGTCGTTTT CCCTCAAAAT CAGCATATAA CCAAGGCAGA CTATGATGAA ACCGGACCTT CCATTATTCA CCGGAAATGC
TTCTGAAATT ATTCATCTCC AGGATTTCAA CAATTGTTTA TTCCGCTGCT TGTACCGGTA CTGTAACATA TCGTATCCTG
TAGATTTTAA ATGCTTGATG TCCATGTGCG TGTATATTGT AAAAGCTGTA GCAATCTCCA TTAAGGCAAT CTTCTCACTT
TTTCTCCCCT CCAAAAAAAT TCTTCTCACC ATCGTGAGTT CCTAAGTTGC AGTAGAAGAT TTCCATGAAT ACTTGTTCCT
CAGAAATGTA TATATGTGGA AGCTTGCATA TCTTTTGCAA TGTGGATATC CTTGTAAAAT ATTCATTTCT TTGTAACCTT
GTAGGCTGTG GCTACTGGCT ACATCCCTTC TAGTAGAACC CCTTGTTCCT ATAATAGTTT 

>Vigan.06G262900.01
ATGGAAGCGG CGGTGGTGGA CGTCGGTTCT AAGCTTCTCA AAGCCGGTTT TGCAATTCCC GACCAGACTC CGGCCATGAT
AATTCCCACT AAAATGAAAC AACTGCTTGA TGATGGATCG GCCACTGATA GCTCACTGGC TGAAAATGTC ACTGTTGATC
CAGTTGTGCG GGGATTTATT AGAGATTGGG ATGCCATTGA GGATTTGTTG CAGCATGTTT TATATACTGG TCTGGGATGG
GAAATTGGCA ATGAAGGTCA AATACTCTTT ACAGATCCAC TTTGTACCCC AAAGGCCAAC AAAGAACAGT TGGTGCAATT
AATGTTTGAA ACATTCAACA TATCAGGGTT TTATGCTTCA GAACAAGCAG TGTTATCACT GTATGCTGTG GGACGTATCT
CAGGCTGCAC TGTTGATATT GGACATGGAA AAATAGATAT TGCACCAGTA ATTGAGGGTG CTGTTCACCA TATTGCCTCA
AGAAGATTTG AATTTGGAGG TATTGATCTA ACTAATTTCC TAGCTCAAGA ACTAGGCAAG ACCAATCCAA AAGTAAATAT
CAGCCTGTCT GATGTGGAGA AAATGAAAGA GCAGTACTCA TGCTGTGCTG TAGATGAGTT AGCTTATCAA AAGACCCAAT
ATTTGTGTCC TGTGGAGGAG CATACCCTTC CTGATGGACA GGTGATAAGA ATTGGGAGAG AAAGATTTAC GGTCGGGGAA
GCTTTATTCC GGCCATGTCT ATTGGGTTTA GAGGCTCATG GCATTGTTGA TCAGCTTGTC CGTGCTATTT CAACTGTGTC
ATCTGATAAT CAACGACAGC TGCTGGAGAA TACGGTGGTT TGTGGTGCCA CTTCATCTAT GGCAGGTTTT GAAGAGAGAT
TTCAAAAAGA ATCTAGCTTA AGTTCATCTG CCGTTCAACC TACCCTTGTT AAGCCTCCAG AATACATGCC AGAAAATTTA
ACCATGTATT CTGCATGGGT GGGAGGTGCA ATACTTGCGA AAGTCGTTTT CCCTCAAAAT CAGCATATAA CCAAGGCAGA
CTATGATGAA ACCGGACCTT CCATTATTCA CCGGAAATGC TTCTGA

>Vigan.06G262900.01
MEAAVVDVGS KLLKAGFAIP DQTPAMIIPT KMKQLLDDGS ATDSSLAENV TVDPVVRGFI RDWDAIEDLL QHVLYTGLGW
EIGNEGQILF TDPLCTPKAN KEQLVQLMFE TFNISGFYAS EQAVLSLYAV GRISGCTVDI GHGKIDIAPV IEGAVHHIAS
RRFEFGGIDL TNFLAQELGK TNPKVNISLS DVEKMKEQYS CCAVDELAYQ KTQYLCPVEE HTLPDGQVIR IGRERFTVGE
ALFRPCLLGL EAHGIVDQLV RAISTVSSDN QRQLLENTVV CGATSSMAGF EERFQKESSL SSSAVQPTLV KPPEYMPENL
TMYSAWVGGA ILAKVVFPQN QHITKADYDE TGPSIIHRKC F*