GBrowse Details

Vigan.06G261200.01

Basic Information:
Name: Vigan.06G261200.01
Multiple alignment
Variant Information
Position: Chr06:38133586..38138027 (- strand)
Length: 4442
Functional Information:
Description: Similar to Uncharacterized protein. [I1L5L3, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.50,5.82,9.44,8.36,11.13,7.36,11.20,16.83
Arabidopsis thaliana homolog: AT2G30700.1
Automatic updates:
Name: BT094274 NCBI(nuccore)
Organism: Glycine max
Description: Soybean clone JCVI-FLGm-24B4 unknown mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001369342 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized protein (LOC100814511), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:38133586..38134439 (- strand)
Length: 854
Type: three_prime_UTR
Position: Chr06:38134440..38134750 (- strand)
Length: 311
Type: CDS
Position: Chr06:38135040..38135054 (- strand)
Length: 15
Type: CDS
Position: Chr06:38135162..38135407 (- strand)
Length: 246
Type: CDS
Position: Chr06:38135936..38136805 (- strand)
Length: 870
Type: CDS
Position: Chr06:38137078..38137111 (- strand)
Length: 34
Type: CDS
Position: Chr06:38137112..38138027 (- strand)
Length: 916
Type: five_prime_UTR

>Vigan.06G261200.01 class=Sequence position=Chr06:38133586..38138027 (- strand)
CTAAATCAAT CATAATCTCT CTCTTTGTTT CTTTCTTTCT GCACTTGTTA ACTCGAATCT TGTATTTTTT TGTTGTCATA
TTTGAAATTT CTATTTTTGG CTTGTCAAAT TTGGATTTGG TGATCGTGCC ACTTAGTGTT CGTTTTTTAG TACAAAGAGG
AAAATTAGCT GTTTGTTTCC CTGTCCATCT GGACCCGTGT GTGTAATCTG TTTGTTCACT ATGCTTCTAA GGAACTTAGT
CATTGCTATA GTTTTCTTGT CGCTTTTTGG TTTTTTCTTT AACTGGAATT GTCCACCTCA GTGAGTTAAT TATGGAATCT
AATCTGAGTT ACTAGGTTCA CTTTATTATT TAATTAGTTT ATTTTGGCAC AAATCTTGTT GACGCGGTAG AGGAGATACG
GGTAATGGTC TGCACAAACT TCGTGGTTAA GGAAAAGAAG CAGAAGTGCA AACCATTTCC GTTGATTACT TGGTTCCATT
TTATCTTGGT ATTTTTGAAG TGTAATATCT TCTTGTAGGA ACTTGCAGAA ACGAAAACAA AATCCTAGGG TTTAAAAAGC
ACTGCTGTGT GCACTGCCCT GTCTCAAAAT TCCATTTTTT ATTGCTCACT CAAAAAAATT CCTGCTAAAT GCATCTCATT
TTTTCAGGCT TGATAATCTT GGAGTATAGT CTCACTGGTT TTGACCTGTG CAGTAGCATG TTTGTGTTGG CTTCGGCTAT
TAGGTAGCGG TTTGGAATTG TACTTGATTG TCCTCTTTCA ACAACCTAAA CTGTTCTCTG ACTTTAATGA CAGATCTTAA
GCTTGGGGGT ATTACATCAT TCCTACACTG CTATGTGGTA CCAATTGGCT TATCACCGGC AACTGCCACT CTGTTCTCCT
GTGTAGAGCT CAATGGTACC AGAGGGCTAG AGAGTTATGG GCTGCTCTCA GGATGCTAAT GGTTATAGGG GTAAGACTAG
TACATTTTGA TGGATGCTTC CTTGTTAGTG GTTCATTAAT TTACTGGTTT TTCATAAGCT TGAGTCCTGA AACTGTGCAA
ACTCTTGTAT GGGTTATTTT TGAGGTAGTC ATCATCATAC TGTAATACAT ACCAATAAAT TCATCAGTCT GTTTTAAATG
TCTGTTGGAT CAACGCACAA TTGTATGCAT TGCGGTCTCT TTTTTTTAAC ATTTTGTTCA AGGAATTATA CCTCCTGTTA
AGTGCTGATT ACATTGTTGC AGGTTCCTTT TACTGTCAGC TAATTCTCTT TATCGTCTGG CTTCCTACTT TACAAGATGT
GACAGCACGA GAAGTACATG CTGACCATAG AAGAATTACT TCTCTGGTAG AGTTAGTTAA GCAACCTGCT TCTGGTGAAT
CTGGACTCTT TGACCCTATA GAAATATCAC CTGCTGTCTT ACCAAAATTC CCGTATCCCT CTGAGTCTTT GCCACCAATG
TATCCTACTT TCCCAACCAG ATACGAACCA GTTTTAACGG GAAAATGTCC TGTGAACTTT TCCCATCCAG GTATATCAAA
TATACTAGAT AAAACAGCAT CTGATTGCTC TGGACCTTTG GCAGCTCTTG TAGGGAATGT AATATGTTGT CCTCAGTTTA
GTAGCTTGAT CCACATCTTC CAGGGTTTCT ACAGCATGAA ATCTGATGAT TTGGTTCTAC CTAACGCTGT TTCCAATCAT
TGTTTTTCTG ATATCATTAG TATTCTAGCC AGTAGAGGGG CTAATAGTAC GATCCCTACA CTATGCTCCA TAAAATCATC
TAACTTTACA GGCGGGTCAT GTCCTGTGAA GGATGATATT ACTCTCGAAA AAACAGTCAA TACAAGTAAG TTAGTTGAGG
CGTGCAGCAC TGTTGATCCA CTTAAAGAAT GCTGCAGACC TGTTTGCCAG CCTGCCATAA TGGATGCAGC CCTACAGATT
TCTGGAAGAC AAACGACGAT TAACAATAAT GAAAATATGG CCGGGGAAGT GAATCACACT GACTATCTTA ATGATTGTAA
AGGTGTGGTT TATTCATATC TTTCCAAAAA GCTATCATTT GAAGCTGCAA ATACTGCATT CCGGATACTG TCTGCCTGCA
AAGTCAATAA AGGTACACTG TTTAGCTATT TCATTTTTAA TTTAATTTAA TTGAATTTAT TTATAGTTTA GGAGATTATC
AGTGATGCAG CCAATTATAT CATTAATGGA TAAATTAGGA TTAGAATGTG GGAAAAGGAA ATTAAGTGAT TTTGTATTAC
TGGTCATACT GTACCTTATT CCAAATTATT TTTTGTTTTC TGTGTATTGG TTTATATTCT TGTGTCCTGT TACTTGGGTG
ATTTCACATT TTATCTATAT TTCCTTTATA GTAAAGAAGA GATTGAGTTC CATTAGGAAA AAGTTGGAAT TTGTGTGTTT
TTCTTTTAGG CAAACTAAAA TGGCCAGAAT GTTGTTTTAT ATGATATTTT ATTTCAATTT TACATTTCCC AGATGCGTGC
ACTTTATGTT TTGAGATGTG CCTGAACCCA AAGTTGTGCA TGTGAATGAC ATATAGTTAA AATTATGTTT TGTAAATTGA
ATTGTAATCT TGTTTCACCT TTTTTTCAAC ACTTGTAAAG AGTAAATATT GCCTGTGCAG TTTGTCCTTT GAGTTTTAAG
GAGCCTGCTG AAGTAATCAG TTCGTGTCAG AATGTAGCTG CCCCTAGTCC TTCCTGTTGT AGTTCATTGA ACGCATATAT
TGCTGGGATA CAAAAGCAAA TGTTAATTAC AAATAAACAA GCTATAATAT GTGCAACACT TTTTGGATCT ATGTTGCGTG
GAGGTGGAGT GATGACAAAT ATTTATGAGC TTTGTGATGT TGATTTGAAA GATTTCAGCA TACAAGGTAT TTATCCTGCT
CAAGCTTAAT TGATATGTGC TGCCCATGGC CACTTTTTGA ATTTCTCTGA TCTAATTCCT CTGTTGTGGT TCTGCATGAT
GCTGGTGCGG CAGCTTATGG ACAACAAGGT TTGCTCTTAT TTCTAGCGCT TGCATTTTCT TCAGAGCTGT TGTTTTTACT
TCACTAACCT ATTTACACAC TGGTTAATAC AACAGCACTT GGTTTTTGTC ATCATAGAGT GGGGAATTAG GAGGGATGCA
TTCTAGGTTC ATTAGAATAC AATCTTGAAT CATCTCATAA TAAAAATAGT TCCGATGAGC AGAGAAAAAA GCTGCTTTTA
AAGCACAGTG TATTAATGCT TGACTTTTGT CAAGGGATAA TTGGTAAATA ATAAGATGTT TGTTGGTTTA TATGCAGGAT
GTTTACTTCG GAGCTTGCCT GGAGATGTGA TATTTGACAA TTCATCCGGT TTTAGCTTTA CATGTGATTT GAGTGACAAC
ATTGCTGCGC CCTGGCCATC ATCGTCATCT TCAATTACAT CTTTGTCACT CTGTGCTCCC GGTATGTTTT TGGAGAAAAT
TACTGTCTTC ATCATTGCAT ACCTTTTCTT TTATTCCAGG ATGCTGATAT TACAAAATAC TGTTTGCGTT TGCTTAACTA
TTGTCCCTAT CCATTTTGGC AGAGATGTCA TTACCAGCTC TCCCAACTTC ACAAACATTA AAAAATAATG GTAAGTCCCA
TTTTGAAATT TATTTTATAT ATTAATACTG ATCCGGCTTT TACTTCAACG AATATAATAC ACGTCTTTAA AGATTCACGT
TTTCTTGCAC AGTGCACACC CTAGTTTTAC TCCTATGATA TGATTAGAAT TTTTTTTGGC CTGTCTCAAA TTCATCGTGG
TCAAATTGTT GCAGAGCCAA ATTTTGACAT TATGAACATG GTGGATTTTG CAGGTTGTAA TTCCGGTGGC GTTGGATTGC
TTTTGCTTAT TTTTTCATTT TTCATCTTCA GTACGCTGTT GTGTTGAAGA GATTTTAGGG TTTAGAAGTG TGTCAGGAAG
GCAGTTCAAT GTGTCTTTGG TGTGGCTTTT GCATGTATAT TTTTGAATGG CCTCATTGTA TAGAAATCGC CCTTTCTCTC
CACATTTCCT CGTGTCTTCC TGCTTGTATG TTCTGAGCAG ATCATTCCGG AGTTAGTGCT CATTTGATTT AGGATCCATA
ATTGTGCTGT GAAGGGTTCG ATTATATTTT TTTTTGCTGA ATTGCTGACA AGCAGATGCT AGATTACCGC TAGAGTTTAC
TATGGCAGCA TCAGGGACTG ACTAACACTG ATTTGGAAAA GGGGTTATGG AACATACTGA CTTGGATGAT GTTTCCATGC
CAATGGTATG CCCCATTCGG AACTGACAAA GTTGACTTTG ACCATCCATA AGTATCTGAC TGATCATTAG ACATTTAGAT
GTGATTAGAG TTTACTAAAT CATTGCACTG GAGAGTATCT CTTCATGGTA AAACTTTCAG GATATTGGGT GTTAAAACCT
GTTAAAAAAA GTGCTATATT TGCCCCAAGC TAATACATAC CA

>Vigan.06G261200.01
CTAAATCAAT CATAATCTCT CTCTTTGTTT CTTTCTTTCT GCACTTGTTA ACTCGAATCT TGTATTTTTT TGTTGTCATA
TTTGAAATTT CTATTTTTGG CTTGTCAAAT TTGGATTTGG TGATCGTGCC ACTTAGTGTT CGTTTTTTAG TACAAAGAGG
AAAATTAGCT GTTTGTTTCC CTGTCCATCT GGACCCGTGT GTGTAATCTG TTTGTTCACT ATGCTTCTAA GGAACTTAGT
CATTGCTATA GTTTTCTTGT CGCTTTTTGG TTTTTTCTTT AACTGGAATT GTCCACCTCA GTGAGTTAAT TATGGAATCT
AATCTGAGTT ACTAGGTTCA CTTTATTATT TAATTAGTTT ATTTTGGCAC AAATCTTGTT GACGCGGTAG AGGAGATACG
GGTAATGGTC TGCACAAACT TCGTGGTTAA GGAAAAGAAG CAGAAGTGCA AACCATTTCC GTTGATTACT TGGTTCCATT
TTATCTTGGT ATTTTTGAAG TGTAATATCT TCTTGTAGGA ACTTGCAGAA ACGAAAACAA AATCCTAGGG TTTAAAAAGC
ACTGCTGTGT GCACTGCCCT GTCTCAAAAT TCCATTTTTT ATTGCTCACT CAAAAAAATT CCTGCTAAAT GCATCTCATT
TTTTCAGGCT TGATAATCTT GGAGTATAGT CTCACTGGTT TTGACCTGTG CAGTAGCATG TTTGTGTTGG CTTCGGCTAT
TAGGTAGCGG TTTGGAATTG TACTTGATTG TCCTCTTTCA ACAACCTAAA CTGTTCTCTG ACTTTAATGA CAGATCTTAA
GCTTGGGGGT ATTACATCAT TCCTACACTG CTATGTGGTA CCAATTGGCT TATCACCGGC AACTGCCACT CTGTTCTCCT
GTGTAGAGCT CAATGGTACC AGAGGGCTAG AGAGTTATGG GCTGCTCTCA GGATGCTAAT GGTTATAGGG GTTCCTTTTA
CTGTCAGCTA ATTCTCTTTA TCGTCTGGCT TCCTACTTTA CAAGATGTGA CAGCACGAGA AGTACATGCT GACCATAGAA
GAATTACTTC TCTGGTAGAG TTAGTTAAGC AACCTGCTTC TGGTGAATCT GGACTCTTTG ACCCTATAGA AATATCACCT
GCTGTCTTAC CAAAATTCCC GTATCCCTCT GAGTCTTTGC CACCAATGTA TCCTACTTTC CCAACCAGAT ACGAACCAGT
TTTAACGGGA AAATGTCCTG TGAACTTTTC CCATCCAGGT ATATCAAATA TACTAGATAA AACAGCATCT GATTGCTCTG
GACCTTTGGC AGCTCTTGTA GGGAATGTAA TATGTTGTCC TCAGTTTAGT AGCTTGATCC ACATCTTCCA GGGTTTCTAC
AGCATGAAAT CTGATGATTT GGTTCTACCT AACGCTGTTT CCAATCATTG TTTTTCTGAT ATCATTAGTA TTCTAGCCAG
TAGAGGGGCT AATAGTACGA TCCCTACACT ATGCTCCATA AAATCATCTA ACTTTACAGG CGGGTCATGT CCTGTGAAGG
ATGATATTAC TCTCGAAAAA ACAGTCAATA CAAGTAAGTT AGTTGAGGCG TGCAGCACTG TTGATCCACT TAAAGAATGC
TGCAGACCTG TTTGCCAGCC TGCCATAATG GATGCAGCCC TACAGATTTC TGGAAGACAA ACGACGATTA ACAATAATGA
AAATATGGCC GGGGAAGTGA ATCACACTGA CTATCTTAAT GATTGTAAAG GTGTGGTTTA TTCATATCTT TCCAAAAAGC
TATCATTTGA AGCTGCAAAT ACTGCATTCC GGATACTGTC TGCCTGCAAA GTCAATAAAG TTTGTCCTTT GAGTTTTAAG
GAGCCTGCTG AAGTAATCAG TTCGTGTCAG AATGTAGCTG CCCCTAGTCC TTCCTGTTGT AGTTCATTGA ACGCATATAT
TGCTGGGATA CAAAAGCAAA TGTTAATTAC AAATAAACAA GCTATAATAT GTGCAACACT TTTTGGATCT ATGTTGCGTG
GAGGTGGAGT GATGACAAAT ATTTATGAGC TTTGTGATGT TGATTTGAAA GATTTCAGCA TACAAGCTTA TGGACAACAA
GGATGTTTAC TTCGGAGCTT GCCTGGAGAT GTGATATTTG ACAATTCATC CGGTTTTAGC TTTACATGTG ATTTGAGTGA
CAACATTGCT GCGCCCTGGC CATCATCGTC ATCTTCAATT ACATCTTTGT CACTCTGTGC TCCCGGTATG TTTTTGGAGA
AAATTACTGT CTTCATCATT GCATACCTTT TCTTTTATTC CAGGATGCTG ATATTACAAA ATACTGTTTG CGTTTGCTTA
ACTATTGTCC CTATCCATTT TGGCAGAGAT GTCATTACCA GCTCTCCCAA CTTCACAAAC ATTAAAAAAT AATGGTAAGT
CCCATTTTGA AATTTATTTT ATATATTAAT ACTGATCCGG CTTTTACTTC AACGAATATA ATACACGTCT TTAAAGATTC
ACGTTTTCTT GCACAGTGCA CACCCTAGTT TTACTCCTAT GATATGATTA GAATTTTTTT TGGCCTGTCT CAAATTCATC
GTGGTCAAAT TGTTGCAGAG CCAAATTTTG ACATTATGAA CATGGTGGAT TTTGCAGGTT GTAATTCCGG TGGCGTTGGA
TTGCTTTTGC TTATTTTTTC ATTTTTCATC TTCAGTACGC TGTTGTGTTG AAGAGATTTT AGGGTTTAGA AGTGTGTCAG
GAAGGCAGTT CAATGTGTCT TTGGTGTGGC TTTTGCATGT ATATTTTTGA ATGGCCTCAT TGTATAGAAA TCGCCCTTTC
TCTCCACATT TCCTCGTGTC TTCCTGCTTG TATGTTCTGA GCAGATCATT CCGGAGTTAG TGCTCATTTG ATTTAGGATC
CATAATTGTG CTGTGAAGGG TTCGATTATA TTTTTTTTTG CTGAATTGCT GACAAGCAGA TGCTAGATTA CCGCTAGAGT
TTACTATGGC AGCATCAGGG ACTGACTAAC ACTGATTTGG AAAAGGGGTT ATGGAACATA CTGACTTGGA TGATGTTTCC
ATGCCAATGG TATGCCCCAT TCGGAACTGA CAAAGTTGAC TTTGACCATC CATAAGTATC TGACTGATCA TTAGACATTT
AGATGTGATT AGAGTTTACT AAATCATTGC ACTGGAGAGT ATCTCTTCAT GGTAAAACTT TCAGGATATT GGGTGTTAAA
ACCTGTTAAA AAAAGTGCTA TATTTGCCCC AAGCTAATAC ATACCA

>Vigan.06G261200.01
ATGGGCTGCT CTCAGGATGC TAATGGTTAT AGGGGTTCCT TTTACTGTCA GCTAATTCTC TTTATCGTCT GGCTTCCTAC
TTTACAAGAT GTGACAGCAC GAGAAGTACA TGCTGACCAT AGAAGAATTA CTTCTCTGGT AGAGTTAGTT AAGCAACCTG
CTTCTGGTGA ATCTGGACTC TTTGACCCTA TAGAAATATC ACCTGCTGTC TTACCAAAAT TCCCGTATCC CTCTGAGTCT
TTGCCACCAA TGTATCCTAC TTTCCCAACC AGATACGAAC CAGTTTTAAC GGGAAAATGT CCTGTGAACT TTTCCCATCC
AGGTATATCA AATATACTAG ATAAAACAGC ATCTGATTGC TCTGGACCTT TGGCAGCTCT TGTAGGGAAT GTAATATGTT
GTCCTCAGTT TAGTAGCTTG ATCCACATCT TCCAGGGTTT CTACAGCATG AAATCTGATG ATTTGGTTCT ACCTAACGCT
GTTTCCAATC ATTGTTTTTC TGATATCATT AGTATTCTAG CCAGTAGAGG GGCTAATAGT ACGATCCCTA CACTATGCTC
CATAAAATCA TCTAACTTTA CAGGCGGGTC ATGTCCTGTG AAGGATGATA TTACTCTCGA AAAAACAGTC AATACAAGTA
AGTTAGTTGA GGCGTGCAGC ACTGTTGATC CACTTAAAGA ATGCTGCAGA CCTGTTTGCC AGCCTGCCAT AATGGATGCA
GCCCTACAGA TTTCTGGAAG ACAAACGACG ATTAACAATA ATGAAAATAT GGCCGGGGAA GTGAATCACA CTGACTATCT
TAATGATTGT AAAGGTGTGG TTTATTCATA TCTTTCCAAA AAGCTATCAT TTGAAGCTGC AAATACTGCA TTCCGGATAC
TGTCTGCCTG CAAAGTCAAT AAAGTTTGTC CTTTGAGTTT TAAGGAGCCT GCTGAAGTAA TCAGTTCGTG TCAGAATGTA
GCTGCCCCTA GTCCTTCCTG TTGTAGTTCA TTGAACGCAT ATATTGCTGG GATACAAAAG CAAATGTTAA TTACAAATAA
ACAAGCTATA ATATGTGCAA CACTTTTTGG ATCTATGTTG CGTGGAGGTG GAGTGATGAC AAATATTTAT GAGCTTTGTG
ATGTTGATTT GAAAGATTTC AGCATACAAG CTTATGGACA ACAAGGATGT TTACTTCGGA GCTTGCCTGG AGATGTGATA
TTTGACAATT CATCCGGTTT TAGCTTTACA TGTGATTTGA GTGACAACAT TGCTGCGCCC TGGCCATCAT CGTCATCTTC
AATTACATCT TTGTCACTCT GTGCTCCCGG TATGTTTTTG GAGAAAATTA CTGTCTTCAT CATTGCATAC CTTTTCTTTT
ATTCCAGGAT GCTGATATTA CAAAATACTG TTTGCGTTTG CTTAACTATT GTCCCTATCC ATTTTGGCAG AGATGTCATT
ACCAGCTCTC CCAACTTCAC AAACATTAAA AAATAA

>Vigan.06G261200.01
MGCSQDANGY RGSFYCQLIL FIVWLPTLQD VTAREVHADH RRITSLVELV KQPASGESGL FDPIEISPAV LPKFPYPSES
LPPMYPTFPT RYEPVLTGKC PVNFSHPGIS NILDKTASDC SGPLAALVGN VICCPQFSSL IHIFQGFYSM KSDDLVLPNA
VSNHCFSDII SILASRGANS TIPTLCSIKS SNFTGGSCPV KDDITLEKTV NTSKLVEACS TVDPLKECCR PVCQPAIMDA
ALQISGRQTT INNNENMAGE VNHTDYLNDC KGVVYSYLSK KLSFEAANTA FRILSACKVN KVCPLSFKEP AEVISSCQNV
AAPSPSCCSS LNAYIAGIQK QMLITNKQAI ICATLFGSML RGGGVMTNIY ELCDVDLKDF SIQAYGQQGC LLRSLPGDVI
FDNSSGFSFT CDLSDNIAAP WPSSSSSITS LSLCAPGMFL EKITVFIIAY LFFYSRMLIL QNTVCVCLTI VPIHFGRDVI
TSSPNFTNIK K*