VIGGS:GBrowse

Vigan.06G230100.01

Basic Information:

Name:	Vigan.06G230100.01 Multiple alignment Variant Information
Position:	Chr06:35945962..35947471 (+ strand)
Length:	1510

Functional Information:

Description:	Non-protein coding gene.
Expression level (FPKM):	Co,Em,Fl,Le,No,Po,Ro,St:169.00,120.82,244.13,123.99,341.14,351.37,218.03,128.04

Automatic updates:

Name:	NM_001349571 NCBI(nuccore)
Organism:	Glycine max
Description:	Glycine max hypothetical protein (LOC100500400), mRNA.
PubMed ID:	-
Status:	Known Variant

Structure :

[show][hide]Parts:

Position:	Chr06:35945962..35946300 (+ strand)
Length:	339
Type:	exon

Position:	Chr06:35946406..35946471 (+ strand)
Length:	66
Type:	exon

Position:	Chr06:35947232..35947471 (+ strand)
Length:	240
Type:	exon

[hide all][show all]SEQUENCES

[show][hide][copy]EXON + INTRON

>Vigan.06G230100.01 class=Sequence position=Chr06:35945962..35947471 (+ strand)
TTTTTTTTCT ACTTGTGTTT TATTAATTAA GGGTTTGGAT TCTGAATTCA AATTGGGCTG ATTAACTATT TGTGGGCCTA
TTGGGCTATG GGGGCAGGAA CTCAGTCTCA GCCCATTGAG CGAACATTGT GCTGTTAAGG AGTCATCCTC TGTTTTCGGT
CCTACCTTGG CTAGGGTTCC ATAATCGACA ATTGTGAAGC ACTGTTTTGT TCATCATCTG CATTTGGAGT TGTAACCTTC
CATCGTTCGT ATCTCTCTTC CACCACAACT GCGCCGACAT CACTCAATCT AATGGCACCT CCTCCAGGAC CTTATTCCGG
TGCCAGCACC CTAGCTTTGG TATGCCGCTA ATTACCCTTT TATTTTTTTT TCTCGTGAAA ACGAGGTACT AAATTCAGTG
ACAACATTTT TGCTGTTTTT CTCTAAAATT TAATGCATTG GTAGGTCGCT AGAGCTTCCG CTTTCTCCTT CGGTGTTGTT
TATGGAAGCA TCAAGCTCAA GTACCTTAAG GTATTTTAAC GAGTCTCTAG TTTTTTTTTT TTTTTTTTTT AATTCTTCCG
ATCATTGACT CCTCTTTTTG TGAGTTGATA TGCATTTCTG AAACCGTAAT TTGGCGATCC AGAGAAATCC GTGACTGGAT
TTTCATTAAA GATTTTATTA ATCTTGGTTT ATCTGAAATT CTGGATTGCC GTCCACATGT TGATTTTAAA CAGTACATTC
ATGTTCAGTG GGGTTAATCA GTTGTTTGTG TGATTTTAAA AAGTATACTG TTTAAGTGAT TTTAATTTTT TGGACTGAAG
ATTACAGATT TGTTGTTGTT GATTTGATTA ATCAAAGCCT CAGCTTACTG ATCCTTTCGT GACTAGTTCT AGTTTCAGTC
CAGATCTACA GCCTTAACTT GAATTAAGCC CTTTTACGGA GTCAATTTGT TGAGTGGCTT GCTGATGTTT TGGTAAAGGT
CTTGATAAAT TGTGAATAGT CTCCCCATGT TTCGAAAATG CTTTATATTC TTAATGGTTG AAATCTGTTC TGGTTTTGTT
ATATAATTTT GTAATATTTG TGCAATTTCA GTGGCATGCA TTGTTGTGCT GTGCCTTGCG TTGTATTTCT ATTGCCTTCT
ATTCGCAGAA TGCCGTCCAT TTTTACATTT TCTATTTCTT GAATTTGGGA TGCTTTATCT TGCTCCGACG TCTAGTTTTT
ATGATTACAC TGTGCTCTGT AGAACTTCTT TTTCGGCAAT GGTCTTTAGG CATGCTTGTT TTACTTTCAG GCAAAAGCCA
AGTCTCATAA AAAAGCTCAG GAGAAGGCTC ATCACTGAAA AAGAGAGAGA TGCCTGGGTT GTTATCTTTC TGAGGATGGA
GTAGATAACT GAAATAATTC ATGACAACAA ACTGTACCAT GTCTTCTCCC ATTTTTTTTT CTGGTTTAAG CTTTGGACAA
TCTTGAAGCA TTGAGTTTAA TGCATTATGA AAATATTCAA TATTTTGCCT TGTTATAATA AATACGATGT

[show][hide][copy]TRANSCRIPT

>Vigan.06G230100.01
TTTTTTTTCT ACTTGTGTTT TATTAATTAA GGGTTTGGAT TCTGAATTCA AATTGGGCTG ATTAACTATT TGTGGGCCTA
TTGGGCTATG GGGGCAGGAA CTCAGTCTCA GCCCATTGAG CGAACATTGT GCTGTTAAGG AGTCATCCTC TGTTTTCGGT
CCTACCTTGG CTAGGGTTCC ATAATCGACA ATTGTGAAGC ACTGTTTTGT TCATCATCTG CATTTGGAGT TGTAACCTTC
CATCGTTCGT ATCTCTCTTC CACCACAACT GCGCCGACAT CACTCAATCT AATGGCACCT CCTCCAGGAC CTTATTCCGG
TGCCAGCACC CTAGCTTTGG TCGCTAGAGC TTCCGCTTTC TCCTTCGGTG TTGTTTATGG AAGCATCAAG CTCAAGTACC
TTAAGGCAAA AGCCAAGTCT CATAAAAAAG CTCAGGAGAA GGCTCATCAC TGAAAAAGAG AGAGATGCCT GGGTTGTTAT
CTTTCTGAGG ATGGAGTAGA TAACTGAAAT AATTCATGAC AACAAACTGT ACCATGTCTT CTCCCATTTT TTTTTCTGGT
TTAAGCTTTG GACAATCTTG AAGCATTGAG TTTAATGCAT TATGAAAATA TTCAATATTT TGCCTTGTTA TAATAAATAC
GATGT