GBrowse Details

Vigan.06G229600.01

Basic Information:
Name: Vigan.06G229600.01
Multiple alignment
Variant Information
Position: Chr06:35910230..35912958 (+ strand)
Length: 2729
Functional Information:
Description: Similar to Aldo-keto reductase, putative. [B9RG54, Ricinus communis]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
InterPro: Aldo/keto reductase (IPR001395)
Aldo/keto reductase, conserved site (IPR018170)
Aldo/keto reductase subgroup (IPR020471)
NADP-dependent oxidoreductase domain (IPR023210)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.63,7.22,55.32,67.66,60.52,108.16,58.84,44.79
Arabidopsis thaliana homolog: AT2G21250.1, AT2G21260.1
Automatic updates:
Name: NM_001253237 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like (LOC100806500), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:35910230..35910297 (+ strand)
Length: 68
Type: five_prime_UTR
Position: Chr06:35910298..35910430 (+ strand)
Length: 133
Type: CDS
Position: Chr06:35910814..35910908 (+ strand)
Length: 95
Type: CDS
Position: Chr06:35911021..35911138 (+ strand)
Length: 118
Type: CDS
Position: Chr06:35911457..35911589 (+ strand)
Length: 133
Type: CDS
Position: Chr06:35912136..35912355 (+ strand)
Length: 220
Type: CDS
Position: Chr06:35912489..35912719 (+ strand)
Length: 231
Type: CDS
Position: Chr06:35912720..35912958 (+ strand)
Length: 239
Type: three_prime_UTR

>Vigan.06G229600.01 class=Sequence position=Chr06:35910230..35912958 (+ strand)
GTAGCATAAG AGATCATGGT CAAAGCATGC AGTAGCAGAG GTGAGTGGAG GAGGAAGAGA AGAAAAACAT GGCAATTACG
CTCAACAATG GCTTCAAGAT GCCCATCATT GGACTGGGTG TGTGGCGCAT GGAAGGAAAA GCAATCAAAG ACATAATTCT
CAATTCCATC AAAATTGGTT ATCGCCATTT TGATTGTGCT GGTATTCTAG TGTTCCAAAT TTAGCATATA TCTTGCGCTT
CTTAATCTAG ATTGGAATCT TCTACCTTCT TAGGCGTTTT TTTACGGTAT GAACAGCATT CGAATTGAAT CCAAAAGCCC
TGATTAAAAC AAAATAATTT ACCTTAGTTG ATGCACACGG TCGATGTTCT TTTTGTGCAG TTTAAAGTAT TAAAACGATT
AAAAGTTACC GTCTTTTTTC TGAATATTCT GATGCCTCCT TTTATCCCTT TTATGCTGTT GGATTAACCC CACCAAAACC
TGTTGATTAA TTAATGTCAA AGCATAAGTT TTAGTTGATG CGTTTACTTA GTGATTTGTG GATTAGCATA AGGTGGTTAA
CGAGATTTGG ATGCGTTGTT GCAGCTGACT ACAAGAACGA AGCAGAAGTT GGAGAGGCGC TTAAGGAGGC TTTTGATAGT
GGCCTTGTGA AGAGGGAGGA CCTTTTCATT ACCACAAAGG TTAGTTTCAT AGTAATTCCT GTTCGTGATT TCTGTAGGTG
AAGATGATAA TGATAATTGT TCTGATTCAG ATAATTACAG TCTTATACTT TGCTTTTGAA TGTGCTTTTA GCTTTGGAAT
TCTGATCATG GACACGTTCT TGAGGCATGT AAAGACAGTC TCAAGAAGCT TCAGTTAACT TATCTAGACT TGTATCTTGT
TCATTTTCCT GTTGCCGTAA GGCATACTGG TATGTCCGTT TCCTTTAATT TATCTTTCAT TGCATGTACG GTTACAACTA
TAACTGTCAC TGTTAAAGGA GTCATCTAAC CGCGCATCTT TGAACATTAC ACTGAAAACA CAGTTGAGCT TCAATTCCAT
ACAGACAAGA TCAGTCATAT ATATATGAAT ACTTCCGTTT TGTTATTCTG TGATAATGTA TACTTTATAT GCTGGCTACT
TTACAAAATT AGCTCAAATC ATGGCATTTT GTTTGGGATT TTTAACAGTG ATTTCATGCA CATTTGAATG CTTTCTAATA
TAATTTTCGC ATATTGCTCA CATGCAGGGG TTGGTAATAC TTCTAGTCCT TTGGATGATG ATGGAGTGCT GGATATAGAT
ACCACCGTAT CCCTGGAAAC TACCTGGCAT GCGATGGAGG ATCTTGTTTC ATCCGGCTTA GTTCGAAGCA TAGGGATCAG
GTGCAATTTG GTTATGCAAA CCATTTTTGC TATGTTCAAG TAGATGCCCC AAAAAATATT TTTGCTACCC TTTATGGGCA
AGTTTTGTCC AGTTATTTAG AACAGTAAAA TCCAGAATGA AGAAAGATAA AACAAACAGT CCTGTCAAGT TCACGAAGAT
TGACATCTTG AAAACCTCTC ATTAGTCATT AGTCATTAGT CACATGATTT TAAATGCACT TTCCAGCTCC TACATGACAG
TTTATATTGT TGGGGGATGA TTAAAAAGAC TTGCAGCCAA GTCTCTTTGC ATTATCCATC TTTATATGCT GTGATATGAA
TCTGATTTTT GGATCTCCAT CATTCTGGTT TGTTCACTCT TGCCTCAGGT TTCAGGTAAC CCTTTATTTA AATTGATTTC
TGTAGACTCT TGTACCATGA TGAAGAGGAA TGTATTGGAT AACCCATCTA TGTTTGATTT AATGGTCTAG ATGTTCCTAG
TATTAACTTG AGAAATGGTT GATTCTTTTT ATTGAAATTG CATTCTTTCA AAAATGTTAT TTGCAGCAAC TATGATATCT
ATCTGACAAG AGATTGCTTA GCATATTCCA AGATAAAACC TGCTGTAAAT CAGATTGAAA CCCATCCATA CTTCCAGCGT
GAGTCTCTCG TCAAGTTTTG TCAGAAGCAT GGGATTTGTG TCACTGCACA CACTCCATTA GGAGGTGGTG CAGCAAATTC
TGAATGGTTT GGTACAGTTT CATGTTTGGA TGACCAAGTT TTCAAAGTGA GTGGTCAATA CTAGTTTCCG AGCACAATGC
TATTAACAAA CTACCATAAC TGCCTGCAAT TGTGTATGAA AAAACAGTTT CACGGAGTAG ATTAATTTGA GGAGGTTGTA
CCATTTTCTT TGATTTCAGG GTCTGGCTGA AAAATACAAA AAGACTACCG CCCAGATTGC TCTTCGCTGG GGCATTCAGA
GGAACACTGT GGTCATTCCC AAATCGTCAA AACTGGAGAG GCTGAAAGAA AACTTTCAGG TTTTTGATTT TGAGTTGTCT
AAAGAGGACC TGAAGCTCAT TGGAAATCTG GATAAAGCAT ATCGAACTAA TCAACCAGCT GTGTTTTGGG GCATAAATCT
GTATGCATGA GAATACCGTT CCTAAGAATG TATCATGAAC TTCCAATATG CAAAAACATA CTGGCCGTTG GATCTTGAGA
CTTGTCTTGA CATTCAGAGA TGGTATAAGC TTCAGTCTCC TTGGTAGTCC ATTGATTTGA TCATCCAATC TCTTCTTTTC
GATGGTTCAA ATATTATCTT TTTAGCCCAT AGAAAATTTC GTGGACTAAA TAAAAGGGAG ATTTCTGAAC ATTTTTAGTT
AATTTTTTT

>Vigan.06G229600.01
GTAGCATAAG AGATCATGGT CAAAGCATGC AGTAGCAGAG GTGAGTGGAG GAGGAAGAGA AGAAAAACAT GGCAATTACG
CTCAACAATG GCTTCAAGAT GCCCATCATT GGACTGGGTG TGTGGCGCAT GGAAGGAAAA GCAATCAAAG ACATAATTCT
CAATTCCATC AAAATTGGTT ATCGCCATTT TGATTGTGCT GCTGACTACA AGAACGAAGC AGAAGTTGGA GAGGCGCTTA
AGGAGGCTTT TGATAGTGGC CTTGTGAAGA GGGAGGACCT TTTCATTACC ACAAAGCTTT GGAATTCTGA TCATGGACAC
GTTCTTGAGG CATGTAAAGA CAGTCTCAAG AAGCTTCAGT TAACTTATCT AGACTTGTAT CTTGTTCATT TTCCTGTTGC
CGTAAGGCAT ACTGGGGTTG GTAATACTTC TAGTCCTTTG GATGATGATG GAGTGCTGGA TATAGATACC ACCGTATCCC
TGGAAACTAC CTGGCATGCG ATGGAGGATC TTGTTTCATC CGGCTTAGTT CGAAGCATAG GGATCAGCAA CTATGATATC
TATCTGACAA GAGATTGCTT AGCATATTCC AAGATAAAAC CTGCTGTAAA TCAGATTGAA ACCCATCCAT ACTTCCAGCG
TGAGTCTCTC GTCAAGTTTT GTCAGAAGCA TGGGATTTGT GTCACTGCAC ACACTCCATT AGGAGGTGGT GCAGCAAATT
CTGAATGGTT TGGTACAGTT TCATGTTTGG ATGACCAAGT TTTCAAAGGT CTGGCTGAAA AATACAAAAA GACTACCGCC
CAGATTGCTC TTCGCTGGGG CATTCAGAGG AACACTGTGG TCATTCCCAA ATCGTCAAAA CTGGAGAGGC TGAAAGAAAA
CTTTCAGGTT TTTGATTTTG AGTTGTCTAA AGAGGACCTG AAGCTCATTG GAAATCTGGA TAAAGCATAT CGAACTAATC
AACCAGCTGT GTTTTGGGGC ATAAATCTGT ATGCATGAGA ATACCGTTCC TAAGAATGTA TCATGAACTT CCAATATGCA
AAAACATACT GGCCGTTGGA TCTTGAGACT TGTCTTGACA TTCAGAGATG GTATAAGCTT CAGTCTCCTT GGTAGTCCAT
TGATTTGATC ATCCAATCTC TTCTTTTCGA TGGTTCAAAT ATTATCTTTT TAGCCCATAG AAAATTTCGT GGACTAAATA
AAAGGGAGAT TTCTGAACAT TTTTAGTTAA TTTTTTT

>Vigan.06G229600.01
ATGGCAATTA CGCTCAACAA TGGCTTCAAG ATGCCCATCA TTGGACTGGG TGTGTGGCGC ATGGAAGGAA AAGCAATCAA
AGACATAATT CTCAATTCCA TCAAAATTGG TTATCGCCAT TTTGATTGTG CTGCTGACTA CAAGAACGAA GCAGAAGTTG
GAGAGGCGCT TAAGGAGGCT TTTGATAGTG GCCTTGTGAA GAGGGAGGAC CTTTTCATTA CCACAAAGCT TTGGAATTCT
GATCATGGAC ACGTTCTTGA GGCATGTAAA GACAGTCTCA AGAAGCTTCA GTTAACTTAT CTAGACTTGT ATCTTGTTCA
TTTTCCTGTT GCCGTAAGGC ATACTGGGGT TGGTAATACT TCTAGTCCTT TGGATGATGA TGGAGTGCTG GATATAGATA
CCACCGTATC CCTGGAAACT ACCTGGCATG CGATGGAGGA TCTTGTTTCA TCCGGCTTAG TTCGAAGCAT AGGGATCAGC
AACTATGATA TCTATCTGAC AAGAGATTGC TTAGCATATT CCAAGATAAA ACCTGCTGTA AATCAGATTG AAACCCATCC
ATACTTCCAG CGTGAGTCTC TCGTCAAGTT TTGTCAGAAG CATGGGATTT GTGTCACTGC ACACACTCCA TTAGGAGGTG
GTGCAGCAAA TTCTGAATGG TTTGGTACAG TTTCATGTTT GGATGACCAA GTTTTCAAAG GTCTGGCTGA AAAATACAAA
AAGACTACCG CCCAGATTGC TCTTCGCTGG GGCATTCAGA GGAACACTGT GGTCATTCCC AAATCGTCAA AACTGGAGAG
GCTGAAAGAA AACTTTCAGG TTTTTGATTT TGAGTTGTCT AAAGAGGACC TGAAGCTCAT TGGAAATCTG GATAAAGCAT
ATCGAACTAA TCAACCAGCT GTGTTTTGGG GCATAAATCT GTATGCATGA 

>Vigan.06G229600.01
MAITLNNGFK MPIIGLGVWR MEGKAIKDII LNSIKIGYRH FDCAADYKNE AEVGEALKEA FDSGLVKRED LFITTKLWNS
DHGHVLEACK DSLKKLQLTY LDLYLVHFPV AVRHTGVGNT SSPLDDDGVL DIDTTVSLET TWHAMEDLVS SGLVRSIGIS
NYDIYLTRDC LAYSKIKPAV NQIETHPYFQ RESLVKFCQK HGICVTAHTP LGGGAANSEW FGTVSCLDDQ VFKGLAEKYK
KTTAQIALRW GIQRNTVVIP KSSKLERLKE NFQVFDFELS KEDLKLIGNL DKAYRTNQPA VFWGINLYA*