GBrowse Details

Vigan.06G218300.01

Basic Information:
Name: Vigan.06G218300.01
Multiple alignment
Variant Information
Position: Chr06:35027204..35029399 (- strand)
Length: 2196
Functional Information:
Description: Similar to Uncharacterized protein. [I1LJI0, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:37.04,25.71,6.93,16.35,14.67,29.48,4.95,6.56
Arabidopsis thaliana homolog: AT2G16070.2
Automatic updates:
Name: NM_001317590 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max plastid division protein PDV2 (LOC100804511), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:35027204..35027390 (- strand)
Length: 187
Type: three_prime_UTR
Position: Chr06:35027391..35028062 (- strand)
Length: 672
Type: CDS
Position: Chr06:35028958..35029155 (- strand)
Length: 198
Type: CDS
Position: Chr06:35029156..35029399 (- strand)
Length: 244
Type: five_prime_UTR

>Vigan.06G218300.01 class=Sequence position=Chr06:35027204..35029399 (- strand)
AGTTAATGAG CGTAGATTTT CTTTCTCTAT GGCGCACCAG AATCACTTGA TCACAATCCC CACCACTGGA AAGCATTTGG
CGGGTTTGGA TTTCATGTCA AACTTTTCTT TTTCTCTTTC AAATTCACAA AATTAATATT ATGAAATTGA AATTACAAGC
ATTGAATTTA GGGTAGAAAA GAACCGAACA AAGGAAACAA ACAAAGAGAG ACAGAGAGAC AGAGGGAGAG AGAGAAAGAG
GAGAATGGAA GAGGAAGGCA TAGGGTTAGT GTTGGCCAGA GCCACAGAAC TTCGATTGAA AATCACCAAT TGCATCCACA
GAACCGACAC CGCCAATGGT CCCACGCCGC ACGCCGACGA CGACGATGAA GAAGCCACCG AGCGCCTTCT CAACATTTGC
GATGCCCTTG AAGCCTTGGA GACCCAACTT TCTTCTTTGC AGGTGCCATA TTTCAAAATT AGGTTTCTTT TCTTTTCTTT
ATTTTTATTT GGGGCTTTTT TGGCGGTTGG GAATTGTGGG ATATCCTAGA TTGTATTTGT TTTTCATAGC TTGTTGGTTG
GGTATTTGAT TTGCTGCTGC CTCAGTTAGT GAGTTCGAGA TTTGAGTGGT GGTCTTGGTA CGTTATGGAA GTTTTGTAGC
TTACCAGCTT TTGTTCATTC TTGTCGATAA TCAAATGCCA ATAAACTCCA TTTTTGTGAC CAAAGTTGTT AACTGTACAT
GTTCAAGTTC AGTAATGCCT GTGGTTAACT GTCACCACAG GTATCTGCAG TGTATTTGCA GTCTAGGTGC TTGAGGTGCT
TCATGGATTG AGAAAATACC ACCTTACTAA TGAATGAATA CACCTTTTCA TTAGTTTTAT GCAGACCCTT GAAAATAATA
AGTAAATTGG TATTTTTTGT AATGAAAACT GAAAACAGAA AGCATTTTCT CAAACTAAAC TGTCCCGGAT TGTATTTAGA
TGCTTGATTT GACTATTGTG GAAACATGGT GTGTCTACGT TTGTGCTTTG TTAGAAATAC AGTTTTCCCT TGCATTGCAT
ATTTACATTC TAAATTAATG GTTTCTTCAT TCTTGGCCTT GCAAATCCAC AATGTGAAAT GAAACTTGAC TCGTTGGAGT
TTGGAAGTGT GTGATCAGTA TGCCATCAGT CCTTCACACT CTTTCCTACT TTGTGACGCT GCGAAAATAT GATTTTATTT
ATTATTTTGA GCTTATATTA ATGCTTGTAA GATGATTTTT AAAGTTGTAT GATTTTTATG CTTTGCTATG AGAAAATAAT
CAAATTATGA TCGAGATAAG AGTTTGCGAA TCATATGTAT CGTTGTGCTT TTTTTAGGTT CTGCAGCAAC AACAGCGATA
TGAAAGAGAA ATTGCCTTGG CTGAGATTGA AAACAGTCGC AAAATGTTAA TTGACAAGCT CTCTGAGTAC AAAGGTAAGG
AATTGGAAGT GATACATGAA GCTTCCACTT TTGCTAGTGA AACAGTGGAG CACAGCAATG ATCTACTACT TCCTCCATAT
CCTAGCCGCC CTCCCTACTC TGTGTCTATG GACAAGGAAT ATCTCTCGCA GATTCCTTCC GTGAACAAGT CTGGTCGCAA
TGGGTTAATG ACGCTTGATC CAATGATTGA GACCAACAAG AATCTCCGTG AAAAAGATCA AAATCTCGTT GAAAATGGGG
CTAAAAATTC GAGAAAAGGA TTGGGATTTT TTATAACTTC TGCAGCCAAA ACAATGCTCA CGGTAGTTGG CGTGGTATCA
ATATTAAGTT TGTCTGGTTT CGGGCCTAAG TTAGGCACAC GTTTCAGCGT GCAAGGCTGG CGTCACAGAG TAGAAAATGT
GGAGAGATCT ACAACTAAAA ACGGGGGTGA GAGACCAAGT ACTCAGTGTC CACCTGGGAA AATAATGGTG TGGGAAAATG
GGGAAGCACG ATGCCTAGTG AAAGAGAGGG TTGAAATTCC ATTTTCAGCT GTTGCTGCAA CTCCTGATAT AAACTATGGA
TGTGGTTGAC AATGGCTTTT GTACTCTGCA TTGTATATCA GTTCACTTTC TTCTCCCTTT CTTTTGTTCC TTCGTTCTAC
CTTTTGTCAA TATGCTTTTG AAAATGTTAT ATTCAGTGGC TGAGTGTCTT GGTTTTGGTA GGTGTTGCAG TTCATCCTTT
ATTTTGAAAA TGGGAGAAAT TTTGAATAAA CACGAC

>Vigan.06G218300.01
AGTTAATGAG CGTAGATTTT CTTTCTCTAT GGCGCACCAG AATCACTTGA TCACAATCCC CACCACTGGA AAGCATTTGG
CGGGTTTGGA TTTCATGTCA AACTTTTCTT TTTCTCTTTC AAATTCACAA AATTAATATT ATGAAATTGA AATTACAAGC
ATTGAATTTA GGGTAGAAAA GAACCGAACA AAGGAAACAA ACAAAGAGAG ACAGAGAGAC AGAGGGAGAG AGAGAAAGAG
GAGAATGGAA GAGGAAGGCA TAGGGTTAGT GTTGGCCAGA GCCACAGAAC TTCGATTGAA AATCACCAAT TGCATCCACA
GAACCGACAC CGCCAATGGT CCCACGCCGC ACGCCGACGA CGACGATGAA GAAGCCACCG AGCGCCTTCT CAACATTTGC
GATGCCCTTG AAGCCTTGGA GACCCAACTT TCTTCTTTGC AGGTTCTGCA GCAACAACAG CGATATGAAA GAGAAATTGC
CTTGGCTGAG ATTGAAAACA GTCGCAAAAT GTTAATTGAC AAGCTCTCTG AGTACAAAGG TAAGGAATTG GAAGTGATAC
ATGAAGCTTC CACTTTTGCT AGTGAAACAG TGGAGCACAG CAATGATCTA CTACTTCCTC CATATCCTAG CCGCCCTCCC
TACTCTGTGT CTATGGACAA GGAATATCTC TCGCAGATTC CTTCCGTGAA CAAGTCTGGT CGCAATGGGT TAATGACGCT
TGATCCAATG ATTGAGACCA ACAAGAATCT CCGTGAAAAA GATCAAAATC TCGTTGAAAA TGGGGCTAAA AATTCGAGAA
AAGGATTGGG ATTTTTTATA ACTTCTGCAG CCAAAACAAT GCTCACGGTA GTTGGCGTGG TATCAATATT AAGTTTGTCT
GGTTTCGGGC CTAAGTTAGG CACACGTTTC AGCGTGCAAG GCTGGCGTCA CAGAGTAGAA AATGTGGAGA GATCTACAAC
TAAAAACGGG GGTGAGAGAC CAAGTACTCA GTGTCCACCT GGGAAAATAA TGGTGTGGGA AAATGGGGAA GCACGATGCC
TAGTGAAAGA GAGGGTTGAA ATTCCATTTT CAGCTGTTGC TGCAACTCCT GATATAAACT ATGGATGTGG TTGACAATGG
CTTTTGTACT CTGCATTGTA TATCAGTTCA CTTTCTTCTC CCTTTCTTTT GTTCCTTCGT TCTACCTTTT GTCAATATGC
TTTTGAAAAT GTTATATTCA GTGGCTGAGT GTCTTGGTTT TGGTAGGTGT TGCAGTTCAT CCTTTATTTT GAAAATGGGA
GAAATTTTGA ATAAACACGA C

>Vigan.06G218300.01
ATGGAAGAGG AAGGCATAGG GTTAGTGTTG GCCAGAGCCA CAGAACTTCG ATTGAAAATC ACCAATTGCA TCCACAGAAC
CGACACCGCC AATGGTCCCA CGCCGCACGC CGACGACGAC GATGAAGAAG CCACCGAGCG CCTTCTCAAC ATTTGCGATG
CCCTTGAAGC CTTGGAGACC CAACTTTCTT CTTTGCAGGT TCTGCAGCAA CAACAGCGAT ATGAAAGAGA AATTGCCTTG
GCTGAGATTG AAAACAGTCG CAAAATGTTA ATTGACAAGC TCTCTGAGTA CAAAGGTAAG GAATTGGAAG TGATACATGA
AGCTTCCACT TTTGCTAGTG AAACAGTGGA GCACAGCAAT GATCTACTAC TTCCTCCATA TCCTAGCCGC CCTCCCTACT
CTGTGTCTAT GGACAAGGAA TATCTCTCGC AGATTCCTTC CGTGAACAAG TCTGGTCGCA ATGGGTTAAT GACGCTTGAT
CCAATGATTG AGACCAACAA GAATCTCCGT GAAAAAGATC AAAATCTCGT TGAAAATGGG GCTAAAAATT CGAGAAAAGG
ATTGGGATTT TTTATAACTT CTGCAGCCAA AACAATGCTC ACGGTAGTTG GCGTGGTATC AATATTAAGT TTGTCTGGTT
TCGGGCCTAA GTTAGGCACA CGTTTCAGCG TGCAAGGCTG GCGTCACAGA GTAGAAAATG TGGAGAGATC TACAACTAAA
AACGGGGGTG AGAGACCAAG TACTCAGTGT CCACCTGGGA AAATAATGGT GTGGGAAAAT GGGGAAGCAC GATGCCTAGT
GAAAGAGAGG GTTGAAATTC CATTTTCAGC TGTTGCTGCA ACTCCTGATA TAAACTATGG ATGTGGTTGA 

>Vigan.06G218300.01
MEEEGIGLVL ARATELRLKI TNCIHRTDTA NGPTPHADDD DEEATERLLN ICDALEALET QLSSLQVLQQ QQRYEREIAL
AEIENSRKML IDKLSEYKGK ELEVIHEAST FASETVEHSN DLLLPPYPSR PPYSVSMDKE YLSQIPSVNK SGRNGLMTLD
PMIETNKNLR EKDQNLVENG AKNSRKGLGF FITSAAKTML TVVGVVSILS LSGFGPKLGT RFSVQGWRHR VENVERSTTK
NGGERPSTQC PPGKIMVWEN GEARCLVKER VEIPFSAVAA TPDINYGCG*