GBrowse Details

Vigan.06G205800.01

Basic Information:
Name: Vigan.06G205800.01
Multiple alignment
Variant Information
Position: Chr06:34071284..34074226 (+ strand)
Length: 2943
Functional Information:
Description: Similar to Aldehyde dehydrogenase. [V7AGM5, Phaseolus vulgaris]
GO: Biological Process: cellular aldehyde metabolic process (GO:0006081)
Biological Process: metabolic process (GO:0008152)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: aldehyde dehydrogenase [NAD(P)+] activity (GO:0004030)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620)
InterPro: Aldehyde dehydrogenase NAD(P)-dependent (IPR012394)
Aldehyde dehydrogenase domain (IPR015590)
Aldehyde/histidinol dehydrogenase (IPR016161)
Aldehyde dehydrogenase, N-terminal (IPR016162)
Aldehyde dehydrogenase, C-terminal (IPR016163)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.33,1.14,17.64,21.96,0.11,5.74,0.11,13.61
Arabidopsis thaliana homolog: AT4G36250.1
Automatic updates:
Name: NM_001367168 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max aldehyde dehydrogenase family 3 member J2 (ALDH3J2), mRNA.
PubMed ID: 28687067 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr06:34071284..34071523 (+ strand)
Length: 240
Type: five_prime_UTR
Position: Chr06:34071524..34071721 (+ strand)
Length: 198
Type: CDS
Position: Chr06:34071842..34071910 (+ strand)
Length: 69
Type: CDS
Position: Chr06:34072013..34072109 (+ strand)
Length: 97
Type: CDS
Position: Chr06:34072208..34072414 (+ strand)
Length: 207
Type: CDS
Position: Chr06:34072615..34072844 (+ strand)
Length: 230
Type: CDS
Position: Chr06:34072952..34073124 (+ strand)
Length: 173
Type: CDS
Position: Chr06:34073323..34073413 (+ strand)
Length: 91
Type: CDS
Position: Chr06:34073523..34073672 (+ strand)
Length: 150
Type: CDS
Position: Chr06:34073755..34074021 (+ strand)
Length: 267
Type: CDS
Position: Chr06:34074022..34074226 (+ strand)
Length: 205
Type: three_prime_UTR

>Vigan.06G205800.01 class=Sequence position=Chr06:34071284..34074226 (+ strand)
AAGACAACGG AGTTTGGAAG AAGACTGGAC GGCAAGAAGG CAAACTGTGA AGGTGCCGAG TGACTCAACC CGAAACACAG
CCCTTAATTG ATCTATGACA AAAATCATGT GAATGACAGA ATGCACAGGG CCCTTCCCCT TTATGAAAGC CAAACTAAGT
TTCCATTGAA GTGTTGGAGT TAGTTGAGCA AATATAAATA CTGGTTGCTG AGAGCTTAAG CAGCTGCACC CCAAAGGAAC
ATGGAGATCA TGTCAAGCTT CGACAGAGAC CTCAATGACA TGAGGGAGTA TTATGAGAGC GGAAAGACTA AGCAAGCATC
TTGGAGAGAA TCTCAGCTCA AATCCTTGCG TTGCTTCCTC ATGGAAAAAC AACAACATAT CATGGAGGCC CTTATGCAGG
ATCTTGGGAA ACATCAACTT GAAGCTTTCA GAGACGAGGT ATCTTTTCAC ATGTTCTTCT CTTATTATAT TGAAACCTAT
TTTGGCTACG TGGAAGAAAT GGTTGCAAAT CATCAATCAG ATATAATTTC TTAGTAATAA AAACCATTCT GGTCGCAGAT
AGGGACTTTG ATCAAGACCT TAAATCTGGC ATTGAAGTCT TTGAAAGCTT GGATGTCAGG CAAAAAGGTA AGATACATGT
CCATACATAC ATCCTTCCAA ATATTTGAAG ATGAGCCTGT GAGAATATAC ATATGAAGTA ACTAGCCACC AAATTGATCA
TTTTGATAGG CTGAATTGCC ACAAGTAGCA TTGCTCACCA GTGCAGAAAT TGTTTCAGAA CCACTTGGTC TGGTCCTCAT
TATTTCATCT TGGAATTTCC CATTTGGTGA GTTAACCTTT AAACCAATCC CTCAGAAACA TTTATGAGAA AAATATGAAG
ATATTATTGT GGTGTGCTCA TTCTGTTGAT TTATGCAAAC GTAGGACTAT CCTTGGAGCC ACTTATTGGA GCAATAGCTG
CGGGAAACGT GGCAATCTTA AAGCCTTCAG AGTTGTCTCC AGCTTCTTCT TCTCTACTCG CTTCCAGTCT CACCTCTTAT
TTGGACAATA AAGCCATTAA GGTGATCCAA GGAGGACCAC AAGAGACCCA ACAGCTACTA GAGCAAAGAT GGGACAAAAT
CTTCTTCACA GGTAAATGGG TTATGTCTGT CTTAATTAGG TGACTCTATT TTTGGACAAA ATTATTAATC TATGAGCAGT
GATTTTAATC TTGTATTGTT TATAGTATAG CCAAAACCAT TTTTAACGAA GAAGACAAAC AAATTGTACT ATTTCGCTCT
CTTTTAACAG AAGAAAATGT TGTCTTCAAT CGTTGTAAAA ACTAATTGCA GGAAGTGCAC GTGTGGGGCG GATTGTTATG
TCTGCTGCTG TGAAGAATTT GACTCCTGTG ACTTTGGAGT TGGGTGGAAA ATGCCCTGCA GTTGTTGACT CCCTTTCATC
TTCCTGGGAT ATAGAGGCCA CTGTGAAGAG AATTGTTGTG GGAAAATTTG GGACTTGTGC TGGTCAAGCA TGCATAGCCA
TTGATTATGT CCTGGTGGAA AATAAGTATT GCTCAAAACT GGTACGTTCA TCCCTTGAAC CTTTTCATGT TCACTGATTT
TTTATCTTTG TTTCCTATGA TGTTTGGTGT TAGGGGTTTT TCTGGTAGCT TATTCTTGTT TCTTTTAGGT GGAACTGATG
AAGGTCTGGA TCAAGAAAAT GTTTGGAGAG AACCCTCAAC GGTCCAAAAC TATCACCAGG ATAGTTAACA AACACCACTT
CTCTAGATTG AACAACCTTC TTGCTGATAA AATGGTCAAA GAATCAGTGG TTTATGGTGG CTCAGTGGAC GAAGAAAACT
TGTAATTAAC TAACACTCTT CCCTTTCTCA GCTACATTTT CTTCCACAAT AATTGTATTT CTGCTAAAGT TGGGTTTTCA
ATAAATTTAA TTAATAAAAG AAAAATATCA AAGATTCTTA CTCATTTTCC TGCAATTAGA ATAGACCAGA AAAGTGCATC
TTTACTTGGC CCAAAACTGT TACCTGTGAA TTCGTGCAGA TTTATTGAGC CAACCATCTT GGTGGATCCC CCACTGGACG
CAGCAATTAT GTCAGAAGAG ATCTTTGGAC CATTACTTCC AATTATTACT GTAACTTTCA TGCACACAAC CCTCCCAATC
ACCACATGCT TGAATCTAAA AATATTTTCC AACTTGGCCA ATGTCATTTT CTTTTCTTTT TTATGGCATT AATTTGCAGG
TAGAGAAGAT TGAGGACAGT ATTAGATTCA TAAGGAGTAG GCCTAAGCCT CTTGCCCTTT ATGTCTTCAC CAAAAACAAA
ACCCTAGAGA GAAGAATGAT ATCTGAAACA TCATCTGGCA GTTTAACTTT CAATGATGCA ATACTACAAG TACAAACAAC
ACTATCTACC ATCATTCCAT TGGAAATCTC TTTGCATGGT TTCATTAATC TTGTTATTTT TGTTTGTGCA GTATGCAGCT
GATTCTCTTC CATTTGGAGG AGTGGGAGAA AGTGGGTTTG GCATGTACCA TGGGAAGTTC TCCTTTGACA CATTTAGCCA
CCAGAAGGCA ATAGTAAGAA GAAGTTTTCT CACTGATTTC TGGTTTAGAT ATCCTCCATG GACACTAAAT AAGTTGCAAC
TACTTGAAGA GTGTTACAAC TATGATTATC TGGGGATGTT CCTTGTCATG CTGGGCTTGA AGAGATCATC AAAACGCTTA
TTTGCAAATC ATATGTAGCT GTATAGGATC TTACTAATAT GAGAACAATA CACACTGTCA TTTGTTTCTT GTGAAAAACC
AGAAAACTGT AATGTTTTCC TTTTCTTTTC TTACAAAGTC CAATAAAAAT TGTTCCATGT GCAATTAGTC TTCCGTACAA
AATTTGCCTA TTAAATTCTT ATGCAGCTTT ATTTGACCTT ATCTGGTTGT CACTGAACTC CAA

>Vigan.06G205800.01
AAGACAACGG AGTTTGGAAG AAGACTGGAC GGCAAGAAGG CAAACTGTGA AGGTGCCGAG TGACTCAACC CGAAACACAG
CCCTTAATTG ATCTATGACA AAAATCATGT GAATGACAGA ATGCACAGGG CCCTTCCCCT TTATGAAAGC CAAACTAAGT
TTCCATTGAA GTGTTGGAGT TAGTTGAGCA AATATAAATA CTGGTTGCTG AGAGCTTAAG CAGCTGCACC CCAAAGGAAC
ATGGAGATCA TGTCAAGCTT CGACAGAGAC CTCAATGACA TGAGGGAGTA TTATGAGAGC GGAAAGACTA AGCAAGCATC
TTGGAGAGAA TCTCAGCTCA AATCCTTGCG TTGCTTCCTC ATGGAAAAAC AACAACATAT CATGGAGGCC CTTATGCAGG
ATCTTGGGAA ACATCAACTT GAAGCTTTCA GAGACGAGAT AGGGACTTTG ATCAAGACCT TAAATCTGGC ATTGAAGTCT
TTGAAAGCTT GGATGTCAGG CAAAAAGGCT GAATTGCCAC AAGTAGCATT GCTCACCAGT GCAGAAATTG TTTCAGAACC
ACTTGGTCTG GTCCTCATTA TTTCATCTTG GAATTTCCCA TTTGGACTAT CCTTGGAGCC ACTTATTGGA GCAATAGCTG
CGGGAAACGT GGCAATCTTA AAGCCTTCAG AGTTGTCTCC AGCTTCTTCT TCTCTACTCG CTTCCAGTCT CACCTCTTAT
TTGGACAATA AAGCCATTAA GGTGATCCAA GGAGGACCAC AAGAGACCCA ACAGCTACTA GAGCAAAGAT GGGACAAAAT
CTTCTTCACA GGAAGTGCAC GTGTGGGGCG GATTGTTATG TCTGCTGCTG TGAAGAATTT GACTCCTGTG ACTTTGGAGT
TGGGTGGAAA ATGCCCTGCA GTTGTTGACT CCCTTTCATC TTCCTGGGAT ATAGAGGCCA CTGTGAAGAG AATTGTTGTG
GGAAAATTTG GGACTTGTGC TGGTCAAGCA TGCATAGCCA TTGATTATGT CCTGGTGGAA AATAAGTATT GCTCAAAACT
GGTGGAACTG ATGAAGGTCT GGATCAAGAA AATGTTTGGA GAGAACCCTC AACGGTCCAA AACTATCACC AGGATAGTTA
ACAAACACCA CTTCTCTAGA TTGAACAACC TTCTTGCTGA TAAAATGGTC AAAGAATCAG TGGTTTATGG TGGCTCAGTG
GACGAAGAAA ACTTATTTAT TGAGCCAACC ATCTTGGTGG ATCCCCCACT GGACGCAGCA ATTATGTCAG AAGAGATCTT
TGGACCATTA CTTCCAATTA TTACTGTAGA GAAGATTGAG GACAGTATTA GATTCATAAG GAGTAGGCCT AAGCCTCTTG
CCCTTTATGT CTTCACCAAA AACAAAACCC TAGAGAGAAG AATGATATCT GAAACATCAT CTGGCAGTTT AACTTTCAAT
GATGCAATAC TACAATATGC AGCTGATTCT CTTCCATTTG GAGGAGTGGG AGAAAGTGGG TTTGGCATGT ACCATGGGAA
GTTCTCCTTT GACACATTTA GCCACCAGAA GGCAATAGTA AGAAGAAGTT TTCTCACTGA TTTCTGGTTT AGATATCCTC
CATGGACACT AAATAAGTTG CAACTACTTG AAGAGTGTTA CAACTATGAT TATCTGGGGA TGTTCCTTGT CATGCTGGGC
TTGAAGAGAT CATCAAAACG CTTATTTGCA AATCATATGT AGCTGTATAG GATCTTACTA ATATGAGAAC AATACACACT
GTCATTTGTT TCTTGTGAAA AACCAGAAAA CTGTAATGTT TTCCTTTTCT TTTCTTACAA AGTCCAATAA AAATTGTTCC
ATGTGCAATT AGTCTTCCGT ACAAAATTTG CCTATTAAAT TCTTATGCAG CTTTATTTGA CCTTATCTGG TTGTCACTGA
ACTCCAA

>Vigan.06G205800.01
ATGGAGATCA TGTCAAGCTT CGACAGAGAC CTCAATGACA TGAGGGAGTA TTATGAGAGC GGAAAGACTA AGCAAGCATC
TTGGAGAGAA TCTCAGCTCA AATCCTTGCG TTGCTTCCTC ATGGAAAAAC AACAACATAT CATGGAGGCC CTTATGCAGG
ATCTTGGGAA ACATCAACTT GAAGCTTTCA GAGACGAGAT AGGGACTTTG ATCAAGACCT TAAATCTGGC ATTGAAGTCT
TTGAAAGCTT GGATGTCAGG CAAAAAGGCT GAATTGCCAC AAGTAGCATT GCTCACCAGT GCAGAAATTG TTTCAGAACC
ACTTGGTCTG GTCCTCATTA TTTCATCTTG GAATTTCCCA TTTGGACTAT CCTTGGAGCC ACTTATTGGA GCAATAGCTG
CGGGAAACGT GGCAATCTTA AAGCCTTCAG AGTTGTCTCC AGCTTCTTCT TCTCTACTCG CTTCCAGTCT CACCTCTTAT
TTGGACAATA AAGCCATTAA GGTGATCCAA GGAGGACCAC AAGAGACCCA ACAGCTACTA GAGCAAAGAT GGGACAAAAT
CTTCTTCACA GGAAGTGCAC GTGTGGGGCG GATTGTTATG TCTGCTGCTG TGAAGAATTT GACTCCTGTG ACTTTGGAGT
TGGGTGGAAA ATGCCCTGCA GTTGTTGACT CCCTTTCATC TTCCTGGGAT ATAGAGGCCA CTGTGAAGAG AATTGTTGTG
GGAAAATTTG GGACTTGTGC TGGTCAAGCA TGCATAGCCA TTGATTATGT CCTGGTGGAA AATAAGTATT GCTCAAAACT
GGTGGAACTG ATGAAGGTCT GGATCAAGAA AATGTTTGGA GAGAACCCTC AACGGTCCAA AACTATCACC AGGATAGTTA
ACAAACACCA CTTCTCTAGA TTGAACAACC TTCTTGCTGA TAAAATGGTC AAAGAATCAG TGGTTTATGG TGGCTCAGTG
GACGAAGAAA ACTTATTTAT TGAGCCAACC ATCTTGGTGG ATCCCCCACT GGACGCAGCA ATTATGTCAG AAGAGATCTT
TGGACCATTA CTTCCAATTA TTACTGTAGA GAAGATTGAG GACAGTATTA GATTCATAAG GAGTAGGCCT AAGCCTCTTG
CCCTTTATGT CTTCACCAAA AACAAAACCC TAGAGAGAAG AATGATATCT GAAACATCAT CTGGCAGTTT AACTTTCAAT
GATGCAATAC TACAATATGC AGCTGATTCT CTTCCATTTG GAGGAGTGGG AGAAAGTGGG TTTGGCATGT ACCATGGGAA
GTTCTCCTTT GACACATTTA GCCACCAGAA GGCAATAGTA AGAAGAAGTT TTCTCACTGA TTTCTGGTTT AGATATCCTC
CATGGACACT AAATAAGTTG CAACTACTTG AAGAGTGTTA CAACTATGAT TATCTGGGGA TGTTCCTTGT CATGCTGGGC
TTGAAGAGAT CATCAAAACG CTTATTTGCA AATCATATGT AG

>Vigan.06G205800.01
MEIMSSFDRD LNDMREYYES GKTKQASWRE SQLKSLRCFL MEKQQHIMEA LMQDLGKHQL EAFRDEIGTL IKTLNLALKS
LKAWMSGKKA ELPQVALLTS AEIVSEPLGL VLIISSWNFP FGLSLEPLIG AIAAGNVAIL KPSELSPASS SLLASSLTSY
LDNKAIKVIQ GGPQETQQLL EQRWDKIFFT GSARVGRIVM SAAVKNLTPV TLELGGKCPA VVDSLSSSWD IEATVKRIVV
GKFGTCAGQA CIAIDYVLVE NKYCSKLVEL MKVWIKKMFG ENPQRSKTIT RIVNKHHFSR LNNLLADKMV KESVVYGGSV
DEENLFIEPT ILVDPPLDAA IMSEEIFGPL LPIITVEKIE DSIRFIRSRP KPLALYVFTK NKTLERRMIS ETSSGSLTFN
DAILQYAADS LPFGGVGESG FGMYHGKFSF DTFSHQKAIV RRSFLTDFWF RYPPWTLNKL QLLEECYNYD YLGMFLVMLG
LKRSSKRLFA NHM*