GBrowse Details

Vigan.06G184000.01

Basic Information:
Name: Vigan.06G184000.01
Multiple alignment
Variant Information
Position: Chr06:32108850..32110951 (+ strand)
Length: 2102
Functional Information:
Description: Similar to uncharacterized protein. [C6TDZ1, Glycine max]
GO: Biological Process: transport (GO:0006810)
Cellular Component: membrane (GO:0016020)
Molecular Function: transporter activity (GO:0005215)
InterPro: Major intrinsic protein (IPR000425)
Major intrinsic protein, conserved site (IPR022357)
Aquaporin-like (IPR023271)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.39,0.21,29.03,130.98,55.20,155.60,223.54,83.56
Arabidopsis thaliana homolog: AT5G60660.1
Automatic updates:
Name: KR185763 NCBI(nuccore)
Organism: Vigna unguiculata
Description: Vigna unguiculata plasma membrane intrinsic protein (PIP2;2) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001253294 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max prolactin-induced protein (PIP), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:32108850..32109238 (+ strand)
Length: 389
Type: five_prime_UTR
Position: Chr06:32109239..32109545 (+ strand)
Length: 307
Type: CDS
Position: Chr06:32109920..32110215 (+ strand)
Length: 296
Type: CDS
Position: Chr06:32110291..32110431 (+ strand)
Length: 141
Type: CDS
Position: Chr06:32110554..32110667 (+ strand)
Length: 114
Type: CDS
Position: Chr06:32110668..32110951 (+ strand)
Length: 284
Type: three_prime_UTR

>Vigan.06G184000.01 class=Sequence position=Chr06:32108850..32110951 (+ strand)
ACCACATGTA GCCGTTGATA CAGAAGAAAG CTTTTAGATC ACACTGGGCC ATGGCCATAT ATATAGTGTA TCTATATGTG
GCACACATGT ACACATGGTA TGTATGTATA TGATAAGAAG AAGTGCCGTT GCAAAGGTGG TCGTGGCGTG GGACCATGCA
AGCGAAATCA AGCTAAGAGG GGCGGCAAAA AACTATGTTA ATCATGTCAT TGTCCATAGA CAAAAAAAAA AAACACACAC
ACACACACAG AGGTTAATTA TTTGATTCAT TACTATTCTC TCTCTCTTTC TTTTGTTACT TAAATACCAC CTCTTTCCAC
TAGACTTATG CATACAGCTA TCACAAACAC AGTTACCTAA CTATAGTAGT ACTGATTGAG GCTTGAGAAA TGGCTAAAGA
TGTTGAGGTT CAAGAGCAAG GAGAATACTC TGCAAAAGAC TATCATGAAC CTCCTCCGGC ACCCTTGTTC GACCCCGAAG
AGCTCACACA GTGGTCCTTC TATAGAGCCC TTATCGCTGA GTTCATTGCT ACCCTTCTCT TCCTCTATGT CACTGTGCTA
ACCATAATTG GCTACAAAAG ACAGACCGAT ACCAACGTTG GTGGCACCGA ATGCGATGGG GTTGGCATTT TGGGCATCGC
TTGGGCCTTT GGTGGCATGA TTTTCATCCT TGTTTACTGC ACTGCCGGTA TTTCAGGTAT ACATCTCTCA CCCCTTTCAA
TTTCCTCTCT CACAGACACC AAAACTTTGC CCTTCTATGC TTTCAAGTTT CAAGTTTGTA CATGAAAAAG GCAAAATTTG
GACAACTTTT GTACATGCTC ACACGTTAAA TCTGCTATAA ACAGCCATTC AATAAACTAT AAGCACACCA TAGTACTAGT
TCGAAGGTAA AAAAGTTGAA GGGGTGTTAA AACTAGGTTA AAATTCTTGT ATAAAATTGT CCATCTTGTT TAAAAAATCT
TGTTAAGTTC GTGGTTCTTT TTGCTGGTTT GTTTGGATAT TGGACAAGGA ACGTGGGTGA GTATGCATGC AAGAAGAAAG
TGTAACATGT TTTTGGATTT GGTGTTGTAG GAGGACACAT AAACCCAGCA GTGACATTCG GGCTGTTCCT AGGACGCAAG
GTGTCGTTGA TAAGGGCGTT GTTGTACATG GTAGCACAGT GTGCTGGTGC TATCTGTGGC ACGGGACTGG CGAAGGGGTT
CCAAACGGCG TACTACAACA GGTATGGAGG TGGTGCTAAC TCTGTTGCTG ATGGCTACAA CAAGGGCACT GCTTTGGGTG
CTGAGATTAT CGGTACCTTC GTTCTTGTCT ACACTGTCTT CTCTGCCACT GACCCTAAGA GGAACGCTAG GGACTCCCAT
GTTCCTGTAA GCACCATATA TATATGTATA TGTTACAAAC TTATTTCTTA AAAAGTTACT CACTAATTTT TCAATATGAA
GGTACTAGCA CCACTCCCTA TTGGCTTTGC TGTGTTCATG GTTCACTTGG CTACAATCCC AGTTACTGGG ACTGGCATTA
ACCCAGCAAG GAGTTTTGGA GCAGCTGTAA TCTACAATGA CGACAAAATC TGGGATGATC AGGTAAAAAC TTGTTAATTA
TTTGAAGATG AAAACACATT TTTGTCGAAG AAAACAAAAT GCTGTTTATG TTGTTATGGA TGTTGATAGT GATGTGTTAA
TTTTGGTGAT TTTTGAATGA ACAGTGGATT TTCTGGGTTG GACCAATTGT TGGAGCAGCA GTGGCTGCAT TTTACCATCA
ATACATTCTT AGAGCAGCAG CTATCAAGGC TCTTGGATCA TTCAGGAGCA ATGCTTAATT AATTAATAAT TAATTAAGCT
ACTTTTCTGG CTTCTTAATT TCCAACAAGG CTATGGTGTT TTCACGAAGA ATAATAATTT CCATGTTGAG GAGTGCTAGT
CTGTCTTGCA GCTCCCTAAT TTAGGCTTTT TCGTCTTTTC TTTTCATCAG CTGCAGTGAT TGCTGTTGTG GGGTTTGGAA
GATAAGGCGA AAACCATGGG GAGCATCAAA ATTGTAGATA AGCATGTTTG TGTCCAAGGG TGTATTTTGT ATCCCTTTTC
TGTCTTTTTT TTTAACGTCC TT

>Vigan.06G184000.01
ACCACATGTA GCCGTTGATA CAGAAGAAAG CTTTTAGATC ACACTGGGCC ATGGCCATAT ATATAGTGTA TCTATATGTG
GCACACATGT ACACATGGTA TGTATGTATA TGATAAGAAG AAGTGCCGTT GCAAAGGTGG TCGTGGCGTG GGACCATGCA
AGCGAAATCA AGCTAAGAGG GGCGGCAAAA AACTATGTTA ATCATGTCAT TGTCCATAGA CAAAAAAAAA AAACACACAC
ACACACACAG AGGTTAATTA TTTGATTCAT TACTATTCTC TCTCTCTTTC TTTTGTTACT TAAATACCAC CTCTTTCCAC
TAGACTTATG CATACAGCTA TCACAAACAC AGTTACCTAA CTATAGTAGT ACTGATTGAG GCTTGAGAAA TGGCTAAAGA
TGTTGAGGTT CAAGAGCAAG GAGAATACTC TGCAAAAGAC TATCATGAAC CTCCTCCGGC ACCCTTGTTC GACCCCGAAG
AGCTCACACA GTGGTCCTTC TATAGAGCCC TTATCGCTGA GTTCATTGCT ACCCTTCTCT TCCTCTATGT CACTGTGCTA
ACCATAATTG GCTACAAAAG ACAGACCGAT ACCAACGTTG GTGGCACCGA ATGCGATGGG GTTGGCATTT TGGGCATCGC
TTGGGCCTTT GGTGGCATGA TTTTCATCCT TGTTTACTGC ACTGCCGGTA TTTCAGGAGG ACACATAAAC CCAGCAGTGA
CATTCGGGCT GTTCCTAGGA CGCAAGGTGT CGTTGATAAG GGCGTTGTTG TACATGGTAG CACAGTGTGC TGGTGCTATC
TGTGGCACGG GACTGGCGAA GGGGTTCCAA ACGGCGTACT ACAACAGGTA TGGAGGTGGT GCTAACTCTG TTGCTGATGG
CTACAACAAG GGCACTGCTT TGGGTGCTGA GATTATCGGT ACCTTCGTTC TTGTCTACAC TGTCTTCTCT GCCACTGACC
CTAAGAGGAA CGCTAGGGAC TCCCATGTTC CTGTACTAGC ACCACTCCCT ATTGGCTTTG CTGTGTTCAT GGTTCACTTG
GCTACAATCC CAGTTACTGG GACTGGCATT AACCCAGCAA GGAGTTTTGG AGCAGCTGTA ATCTACAATG ACGACAAAAT
CTGGGATGAT CAGTGGATTT TCTGGGTTGG ACCAATTGTT GGAGCAGCAG TGGCTGCATT TTACCATCAA TACATTCTTA
GAGCAGCAGC TATCAAGGCT CTTGGATCAT TCAGGAGCAA TGCTTAATTA ATTAATAATT AATTAAGCTA CTTTTCTGGC
TTCTTAATTT CCAACAAGGC TATGGTGTTT TCACGAAGAA TAATAATTTC CATGTTGAGG AGTGCTAGTC TGTCTTGCAG
CTCCCTAATT TAGGCTTTTT CGTCTTTTCT TTTCATCAGC TGCAGTGATT GCTGTTGTGG GGTTTGGAAG ATAAGGCGAA
AACCATGGGG AGCATCAAAA TTGTAGATAA GCATGTTTGT GTCCAAGGGT GTATTTTGTA TCCCTTTTCT GTCTTTTTTT
TTAACGTCCT T

>Vigan.06G184000.01
ATGGCTAAAG ATGTTGAGGT TCAAGAGCAA GGAGAATACT CTGCAAAAGA CTATCATGAA CCTCCTCCGG CACCCTTGTT
CGACCCCGAA GAGCTCACAC AGTGGTCCTT CTATAGAGCC CTTATCGCTG AGTTCATTGC TACCCTTCTC TTCCTCTATG
TCACTGTGCT AACCATAATT GGCTACAAAA GACAGACCGA TACCAACGTT GGTGGCACCG AATGCGATGG GGTTGGCATT
TTGGGCATCG CTTGGGCCTT TGGTGGCATG ATTTTCATCC TTGTTTACTG CACTGCCGGT ATTTCAGGAG GACACATAAA
CCCAGCAGTG ACATTCGGGC TGTTCCTAGG ACGCAAGGTG TCGTTGATAA GGGCGTTGTT GTACATGGTA GCACAGTGTG
CTGGTGCTAT CTGTGGCACG GGACTGGCGA AGGGGTTCCA AACGGCGTAC TACAACAGGT ATGGAGGTGG TGCTAACTCT
GTTGCTGATG GCTACAACAA GGGCACTGCT TTGGGTGCTG AGATTATCGG TACCTTCGTT CTTGTCTACA CTGTCTTCTC
TGCCACTGAC CCTAAGAGGA ACGCTAGGGA CTCCCATGTT CCTGTACTAG CACCACTCCC TATTGGCTTT GCTGTGTTCA
TGGTTCACTT GGCTACAATC CCAGTTACTG GGACTGGCAT TAACCCAGCA AGGAGTTTTG GAGCAGCTGT AATCTACAAT
GACGACAAAA TCTGGGATGA TCAGTGGATT TTCTGGGTTG GACCAATTGT TGGAGCAGCA GTGGCTGCAT TTTACCATCA
ATACATTCTT AGAGCAGCAG CTATCAAGGC TCTTGGATCA TTCAGGAGCA ATGCTTAA

>Vigan.06G184000.01
MAKDVEVQEQ GEYSAKDYHE PPPAPLFDPE ELTQWSFYRA LIAEFIATLL FLYVTVLTII GYKRQTDTNV GGTECDGVGI
LGIAWAFGGM IFILVYCTAG ISGGHINPAV TFGLFLGRKV SLIRALLYMV AQCAGAICGT GLAKGFQTAY YNRYGGGANS
VADGYNKGTA LGAEIIGTFV LVYTVFSATD PKRNARDSHV PVLAPLPIGF AVFMVHLATI PVTGTGINPA RSFGAAVIYN
DDKIWDDQWI FWVGPIVGAA VAAFYHQYIL RAAAIKALGS FRSNA*