GBrowse Details

Vigan.06G137900.01

Basic Information:
Name: Vigan.06G137900.01
Multiple alignment
Variant Information
Position: Chr06:26406212..26410384 (- strand)
Length: 4173
Functional Information:
Description: Similar to Uncharacterized protein. [I1LRY1, Glycine max]
GO: Molecular Function: DNA binding (GO:0003677)
InterPro: SAND domain (IPR000770)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:74.90,51.72,14.75,14.61,16.88,19.87,20.84,11.48
Arabidopsis thaliana homolog: AT4G28190.2
Automatic updates:
Name: NM_001254214 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein ULTRAPETALA 1-like (LOC100815782), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:26406212..26406470 (- strand)
Length: 259
Type: three_prime_UTR
Position: Chr06:26406471..26406645 (- strand)
Length: 175
Type: CDS
Position: Chr06:26408205..26408529 (- strand)
Length: 325
Type: CDS
Position: Chr06:26409780..26409990 (- strand)
Length: 211
Type: CDS
Position: Chr06:26409991..26410384 (- strand)
Length: 394
Type: five_prime_UTR

>Vigan.06G137900.01 class=Sequence position=Chr06:26406212..26410384 (- strand)
CAAAAACCTA GTCTGGTTTC ATGAGAGGAT TTCCTATAAA CTTTTGTTTT CTCTCTCTCT ATCTCTCTTT ATATATCAAT
ATCCTCCCTC ATCTCATGAC ATATCATATC ATGCATAGCA AGTAGCACCC TAAGCCTTTT AACCCCTTCA CCTCACTCAA
CATTTGTTTG GCTACGCCAG CTCATTCATT TATTCATTCA ACCCCATCAC CAACCCCTCA CTATCTCTCT CTATTCCTCT
CTTTCTCTCT CTCTTCTCAA ACGTTTCAAC GTTTCAGTGT CAGATCTCAA GGCTTAACGT GGTGTTGGGT CGTCTTCAGC
TTTGCGTTGC CCTTGGTATT CGATTCTACA CCCACATCGT TTTCTGGTAA AAAACAGAGT CTTTTGAGGG GAAAATGGCT
AACGGGTTAG AGAGAGAAAG TGGGTCGACG ATATTCAGCG AGGAGGAGCT GAGAGAGGTG AGTGGGGTGA AGCGTGTTGG
GGACTATGTC GAAGTCACGT GTGGGTGCAC GAGCCATAGA TATGGTGACG CTGTTGGAAG ACTTAGGGTT TTCGTTAATG
GGTACCTTGA AATCACTTGT GAATGCACCC CTGGTTGTCA AGAAGGTCTC TTTCTCTCTC CAAAGAGGAG GGTTTTGGTT
TTTGTTTAGT TTTGTTTTGT GAGTGTTTTT GTGTTGTGCA TGTCTGAAGT TTGTGTTGAG GTGAGTTTTT TTGACGTTGA
TGGGTGTCAT TATGGGGTTG TTTTGATCTG CTTCGGTTTG TGAGTTTGTG ATGGTTCGTT CATACAGTTG AACTGTATGT
TGATTTGTCT CACTGAACTT ATTGGTTTGG TATACTACAC GATCGGGCTT GGAGGGTGTT TGTTTTTGTT GTGTGCAATT
GTTGAAGATT TTTAAACAAC ACCTGTCTTT TTGTGTGTTT AAACGTGTCT TGTTTTCTTT ATGAAGGAGA CCTTTTTGTT
GTTTGTATAT AATAATAACG TGGCGTAACC ATTATGTTAT ACCGTTACTC CATGTTTGTT GAAAGTGATC GAAGTCTGTT
TGACAGAGTA GACTGTTTGT GTGATCCTAT GGTATTATTA TTAATCAATA TGTAACGAGT TTTGCTCATG AGTTTGGTTC
TTGTCCCTGA TGGCATATTC TCTTATGTTA GGAATGAATG TGATTGATTG ATATTTGTAT TTGGCATGAA CCATCCGTTC
CACTTGAGTA GTTTTTAATT GTTGGGTACT GAGTTGAACG AGTACCTTCG GCAGAGACTG AAAATAGAAT CTAATTCTTT
CAATCACTAT GCATATGCTT TGTCTAGTTG TATTTGTTCC ATGTATCAGA TGTCTGCGTT ATTTTTGCTT CCACAAGAAT
GTATAGAAGG ATTAATATCT TGATGCATGT GCATTAAATA AAAACAAAGA TAATGACTGT TACTTTGTGA ATCTTGTTCG
CCTCGCAGCA TGGGATGTAT TTAAGTAATC GTTTCTACAA AATATACATG AAATACCGGC TTAAGAAAAT GATTTTCATA
GAGTAATGTA AAGCCATGCC AATATGATTT GAACTTGAAA GCACCTACAG ATCTACAATT AGTGAAGTGA TCACATGATT
AAGTGTGGAT AAGAGTCCTG GAAATTCACT CATAAATAAA TAGAAAAAAG GATTTTATGG GCCCTCTGGT GAAGTTGAGA
GGGGAAAGTA AGCTCTAATA GCCTAGCTCT TGAAAAAGAA AAAACCTTTT TTGTGATTTT TGATTCTAGA CTTTGCTTGC
TATTTAGTGT TGCTTCTGAT TATTATTATT TCTTTTGTGA GTGTTTGTCT CCCAAATGAC CTTTTTTATT TGCATTAACG
TTGCTTTATT GATAGCCAAG TTGACTCCTT CTGCATTTGA GAAACACTCT GGAAGAGAGA CTGCCAGGAA ATGGAAGAAT
AATGTCTGGG TGATTGTTAA TGGTGAGAAG GTTCCACTGT GTAAAACAGT ACTGCTCAAA TACTACAATC AGGTGTCAAA
AGCAGCAAAT GGATCCCATA GATCCCAAAA TGGCCGTGCT TGTCACCGTG ATGAGTTTGT TCGCTGCTCT AGGTGCAACA
AAGAGCGTAG GTTTCGTCTG AGAACAAAAG AGGAATGCCG CATTCACCAT GATGCTTTGG CAGATGCAAA TTGGAAATGT
TCTGATCTTC CATATGACAA GTATGTTCTT TTTTCTCTTC TATATGGTGC ATTTTTAGAG AATTAAATGT AAATGAGCAA
GTCATGTTTT GATTGTTGAT GGCTTGTTGC TGTAGTGTAT ATTTTTTTTA TTGATGTTAA TAAATTCACC ATGCTTTGAA
CGCTTTTATT TACGCCAATA ACACTGCCTA TTTAAAATGT TATATTATCG GTAGTGATAT GGCCACGTTC CAGTTCATTG
ATCTTTTCTT ACTTATGAGT AAGATTTGAA TCTGCAGTAG CCAATAGTTG CTAATTTGCA GAGTGCTATG CAAGCTATAG
TGTACAGTCT TAAATTATGG CATCTGTTGT TCTTACAACA TAAGTACCAA TATTTCAATT TGGCAAGAAG CTGTGCATTC
TGGATTTAAT GATTTAAACA GGGATTCAAA AATGGAAGAG GGGCAAAAAT ATGCTGAAGC TGGCATTTGG CAAGGGGAAT
GATGAGTGCA ATTCCAGTGT ACGACAAAAG AGCTTGAAAT ATAATGCCTG ATGATTAAGT TTTCAAAATT GTGAAGTGAT
TTGTTTGCAG TAGATTGAAT ATCTTTGTTT AGCAAAAATT CCCATTCGTC AATAATTTAA TGACTATTTC CTGAGACAAT
TTGGGCGCAA TTTTGTTATA GGAATGTAGT AGAAAAATAG GTCTTAGTCT CCTTAATGAC AGTTAGGTTG TATGGGTCGT
ACTGTTCCCA TGATTTTCTT TTCTCCTGAA TTTAGAATGA AAACTATTCA TTAGCACAGG AACCTTTGGT TTGAGATAAC
ATTTTTTATT TACATTTTTA ATTACAAAAA TGGTGCCTTG TTTCTACTTT GTTTTCTGTT TTCAGATGTT TGTACAAGAA
GCAGTGATAC AAGCAAAAAT AAAACCTTTT TCATTATTTC CCATTTGAAT TTCTGAAAAC AGAAGACAAA GTACAAAGAA
GGTGACACTT TTGTAATTAA AAGTAAAAAC AGAAAAGGAA AACAAAAATA TGTTTTCTAT CTAGCCCAAA AGTTATAATA
TAGTTTTTTA AAAGTGTTTT GCCTACATGT TCATCTTCCA TCCACCACTG CTAATGCCTC TTACTGCTTA GACTATTTTG
GCCTCTGCAG TTATATATAC TGCTGTTTAT GCTATTATTA TATTTGAAAC TAGATAGCTT CTAGAACTTC ATTATTGTTG
ACTTAAATGT ATACCATCGC TTTGATCAGC CATTGCACGT TATTTCTAGT TATCAGTCCA CTATGTCCAT TTTCTCCTTT
CACCCCATGT CAGACTGATC ACCACCCTTT TGTTTAATAA TAAAAGATTC TTTGCAACCA ATGACAATGG ATAGATTGTT
ACCCCCCACT TTGGAGACGA AGGACAAGCT CCTGATGGGT ATCTTATATT CTTATCCATT ACAAACAGTT ATCTGAAAGT
ATTTTGGTAA AGTACAGTAG ATAAATGGTT TTATTTTATA TCCAGCATTA TCATTTATCC TATTGGTCTT GTTATGTTAT
TTGCATATTT GTGATTACTG AAATTTTTGG AGCAACTAAT AATGGTAATT ATTTTTCAGA ATTACATGTG ATGATGAAGA
GGAAAGAGCA AGTCGTAGAG TTTACAGGGG ATGCACTCGT TCTCCAACAT GCAAAGGTTG CACTTCTTGT GTCTGTTTTG
GCTGTGATAT CTGCCGCTTT TCAGAGTGCA GTTGCCAGAC TTGTGCTGAC TTTACAAACA ATGCCAAAGC TTGACTCCTT
CATATTATAT GCTATTTTCT ATTTTCTCAC TTGTTAATGT GACCTATTTA TGCCTCCCTA TAAGAACAAT ACGTTTAATT
TAATTTCCTA ATTGCTCATT ACCAGTCTGA CTGAGTTCAC CATTCCTTGT TCTCACTGTG ACTGGATCAT AAATTTCAAT
CTCAGCAATT TATTTTCACT CTCTCTTTCT CCTTATGTTT GTTTATATAT ATTATCATGA AGGAAAAAAG ATGTTAATAA
AAGAGGTGGC AGG

>Vigan.06G137900.01
CAAAAACCTA GTCTGGTTTC ATGAGAGGAT TTCCTATAAA CTTTTGTTTT CTCTCTCTCT ATCTCTCTTT ATATATCAAT
ATCCTCCCTC ATCTCATGAC ATATCATATC ATGCATAGCA AGTAGCACCC TAAGCCTTTT AACCCCTTCA CCTCACTCAA
CATTTGTTTG GCTACGCCAG CTCATTCATT TATTCATTCA ACCCCATCAC CAACCCCTCA CTATCTCTCT CTATTCCTCT
CTTTCTCTCT CTCTTCTCAA ACGTTTCAAC GTTTCAGTGT CAGATCTCAA GGCTTAACGT GGTGTTGGGT CGTCTTCAGC
TTTGCGTTGC CCTTGGTATT CGATTCTACA CCCACATCGT TTTCTGGTAA AAAACAGAGT CTTTTGAGGG GAAAATGGCT
AACGGGTTAG AGAGAGAAAG TGGGTCGACG ATATTCAGCG AGGAGGAGCT GAGAGAGGTG AGTGGGGTGA AGCGTGTTGG
GGACTATGTC GAAGTCACGT GTGGGTGCAC GAGCCATAGA TATGGTGACG CTGTTGGAAG ACTTAGGGTT TTCGTTAATG
GGTACCTTGA AATCACTTGT GAATGCACCC CTGGTTGTCA AGAAGCCAAG TTGACTCCTT CTGCATTTGA GAAACACTCT
GGAAGAGAGA CTGCCAGGAA ATGGAAGAAT AATGTCTGGG TGATTGTTAA TGGTGAGAAG GTTCCACTGT GTAAAACAGT
ACTGCTCAAA TACTACAATC AGGTGTCAAA AGCAGCAAAT GGATCCCATA GATCCCAAAA TGGCCGTGCT TGTCACCGTG
ATGAGTTTGT TCGCTGCTCT AGGTGCAACA AAGAGCGTAG GTTTCGTCTG AGAACAAAAG AGGAATGCCG CATTCACCAT
GATGCTTTGG CAGATGCAAA TTGGAAATGT TCTGATCTTC CATATGACAA AATTACATGT GATGATGAAG AGGAAAGAGC
AAGTCGTAGA GTTTACAGGG GATGCACTCG TTCTCCAACA TGCAAAGGTT GCACTTCTTG TGTCTGTTTT GGCTGTGATA
TCTGCCGCTT TTCAGAGTGC AGTTGCCAGA CTTGTGCTGA CTTTACAAAC AATGCCAAAG CTTGACTCCT TCATATTATA
TGCTATTTTC TATTTTCTCA CTTGTTAATG TGACCTATTT ATGCCTCCCT ATAAGAACAA TACGTTTAAT TTAATTTCCT
AATTGCTCAT TACCAGTCTG ACTGAGTTCA CCATTCCTTG TTCTCACTGT GACTGGATCA TAAATTTCAA TCTCAGCAAT
TTATTTTCAC TCTCTCTTTC TCCTTATGTT TGTTTATATA TATTATCATG AAGGAAAAAA GATGTTAATA AAAGAGGTGG
CAGG

>Vigan.06G137900.01
ATGGCTAACG GGTTAGAGAG AGAAAGTGGG TCGACGATAT TCAGCGAGGA GGAGCTGAGA GAGGTGAGTG GGGTGAAGCG
TGTTGGGGAC TATGTCGAAG TCACGTGTGG GTGCACGAGC CATAGATATG GTGACGCTGT TGGAAGACTT AGGGTTTTCG
TTAATGGGTA CCTTGAAATC ACTTGTGAAT GCACCCCTGG TTGTCAAGAA GCCAAGTTGA CTCCTTCTGC ATTTGAGAAA
CACTCTGGAA GAGAGACTGC CAGGAAATGG AAGAATAATG TCTGGGTGAT TGTTAATGGT GAGAAGGTTC CACTGTGTAA
AACAGTACTG CTCAAATACT ACAATCAGGT GTCAAAAGCA GCAAATGGAT CCCATAGATC CCAAAATGGC CGTGCTTGTC
ACCGTGATGA GTTTGTTCGC TGCTCTAGGT GCAACAAAGA GCGTAGGTTT CGTCTGAGAA CAAAAGAGGA ATGCCGCATT
CACCATGATG CTTTGGCAGA TGCAAATTGG AAATGTTCTG ATCTTCCATA TGACAAAATT ACATGTGATG ATGAAGAGGA
AAGAGCAAGT CGTAGAGTTT ACAGGGGATG CACTCGTTCT CCAACATGCA AAGGTTGCAC TTCTTGTGTC TGTTTTGGCT
GTGATATCTG CCGCTTTTCA GAGTGCAGTT GCCAGACTTG TGCTGACTTT ACAAACAATG CCAAAGCTTG A

>Vigan.06G137900.01
MANGLERESG STIFSEEELR EVSGVKRVGD YVEVTCGCTS HRYGDAVGRL RVFVNGYLEI TCECTPGCQE AKLTPSAFEK
HSGRETARKW KNNVWVIVNG EKVPLCKTVL LKYYNQVSKA ANGSHRSQNG RACHRDEFVR CSRCNKERRF RLRTKEECRI
HHDALADANW KCSDLPYDKI TCDDEEERAS RRVYRGCTRS PTCKGCTSCV CFGCDICRFS ECSCQTCADF TNNAKA*