GBrowse Details

Vigan.06G125600.01

Basic Information:
Name: Vigan.06G125600.01
Multiple alignment
Variant Information
Position: Chr06:24495126..24498553 (- strand)
Length: 3428
Functional Information:
Description: Similar to Uncharacterized protein. [I1KEY3, Glycine max]
GO: Biological Process: protein folding (GO:0006457)
Molecular Function: unfolded protein binding (GO:0051082)
InterPro: DnaJ domain (IPR001623)
Chaperone DnaJ, C-terminal (IPR002939)
HSP40/DnaJ peptide-binding (IPR008971)
DnaJ domain, conserved site (IPR018253)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:58.00,71.78,64.14,31.67,60.64,32.87,15.56,31.05
Arabidopsis thaliana homolog: AT2G20560.1
Automatic updates:
Name: NM_001254269 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max dnaJ homolog subfamily B member 4-like (LOC100778672), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:24495126..24495586 (- strand)
Length: 461
Type: three_prime_UTR
Position: Chr06:24495587..24496025 (- strand)
Length: 439
Type: CDS
Position: Chr06:24497303..24497742 (- strand)
Length: 440
Type: CDS
Position: Chr06:24498114..24498278 (- strand)
Length: 165
Type: CDS
Position: Chr06:24498279..24498553 (- strand)
Length: 275
Type: five_prime_UTR

>Vigan.06G125600.01 class=Sequence position=Chr06:24495126..24498553 (- strand)
TTTTTCTGAA AGAGCCTAGA AATAGAAAAT CGTGTAGGTT TCTCGAAACT TCCACCAAAA TCGAGATGCT ACTACACCTG
TAGAACACCA ACTTCAACAC CCTAATGATT TAAACATATC TTTCCACCAT ATCATCAACC TCAAACTCAA AATCTAAGAA
CAAATTCTGA GTTGTCAAAG TGAGATAGAG CATAACTTCA CAGAAAGATT GTGCAACAAC CGCAAAACTG AAGAGAAAGA
GGGTAGAAGA AGAACAAACA CCTTCACGGT CAAAGATGGG TGTGGATTAC TACAAGATCT TGCAGGTTGA TAAAAACGCC
AAAGACGATG ACTTGAAGAA GGCTTACAGG AAACTTGCTA TGAAATGGCA CCCAGATAAA AACCCCAACA ACAAAAAGGA
AGCCGAAGCT AAGTTTAAGC AGATTTCCGA AGCATACGAG GTATGTTTTC ATAACGGTGT TGTAAATTTT TAACTTTTTG
TGGAACTAGG AGTGGAATAA TGAAACCCAA TGAAGTATTT CATCTGGCTT ATGTTTACTT TTTTTAATCT AGTATGATTT
CAAACATTTT TCTCTAGGTT GTCGTAAATT TTTGAGTTTT TCTTTCCTGA AATTAGAAGT AATTAGTGAA ACACAGATGA
AACATTTCAT CTGGTTATGC TAATTTTTCT TTATGTCATT GTGCTTCCAT GGTTTTTCAA CAAGGGTTCA TGCAAAATTT
TAAGCTTTTA TGAATAAACA ATGGAATTCA CTAAAGAGAT TTATTTGTCT GGAGGTTGAT GCTTACTTTA TTTACCTTGT
TATTGTTGAA GGTGCTTAGC GATCCTCAAA AGAAAGCTAT TTATGATCAA TATGGAGAAG AGGGTCTGAA AGGTCAGGTT
CCTCCTCCTG ATGCTGGTGG TGCTGGAACT ACATACTTTT CCACTGGAGA TGTTCCGGGA TCTTTTCGGT TCAATCCAAG
GAATGCAGAT GACATTTTTG CAGAATTTTT TGGCTTCTCA AGCCCATTTG GAGGAATGGG TGGGAGAGGT GGTGGCGGCG
GAGGCGGAGG CGGCATGAGA TCAAGGTTCC CTGGTGGGAT GTTCGGTGAT GATATGTTTG CATCTTTTGG GGATGGAACG
GTACATATGA GTCAAGGGGC TCCTCGGAAA GCTCCTCCCA TTGAGAACAA GTTGCCTTGC ACTCTTGAGG AGATATATAG
AGGAACTACA AAGAAGATGA AGATCTCTAG AGAAATTGCT GATGCCAGTG GGTGAGTACA TGTTAATACC TGACTATTTC
TTCTCCTATA TTTGAGGATC TTCTGGTTTT CTTAGTTTTT GTTGTCTTGT ATGTGGTATG ATCTCTGATA TGCACAATTT
TGTGCATGAC TGAAATGGGC GAGCTTTCAA TCTGGGGTTT TTGTAAAAGC ATATAATTGA TCCTAAAACA TGATTGCAAT
ATACTATTTT CACTTGTTTA CATGATTGCA ATATACTATT TTCACTTTTT TGAGTGCTTG ACGTGAAATT GTTAACCAAA
GCTTGATAAT TGGTTGTCCT TCTGTATGCT ATGTTCAAGC CATGAGGGAA AGTTGTTTAG TTAACACAAT GTTTACTGCA
TAAACTGTTT GTTGTTTGAA AGTTGTTATT TTGTGCCATT TGAACTTTGT TTAAAGAGGA ACATTGATAA CTACGTTCTA
AACCTATTTT AATAGCTACT GGAATATTAG AAGACACTTG TACTTTGAAA CATTATGAAG CATATCCTTT CTGCACTGCA
AAGTTTGTAC AACCTCTGAT ATGTGTTCCT AGACATTATT TAATTGTTTA CTGGTGGTTC AGAGGTGAAT TGAAACAATG
CTTTAGTTTG CAAAGGTATA TACAGAACTT ACTAGGTTTT AATTTCTAGA ATCTAAATAA ATAAAAATTA CATCAGTTAG
TCTGTGATTG GTAGGCATTA GATGGATGGT GGTGGTGAAT GTTATATTGG TGTTCTATTT CAACTCATTA CATACTTTTG
GCACTTAGTT ATTCCTAGTA ATATGACTTC ATGGGATGTA AGCTTGAAAT AATGAGGGTT AATGATCTAA CAAGTGAGAA
GGTGTTTGGT AAATTGCTGA ACTTCTATTC TACATGGTCA TTTTGTCGTT ATTTTGTTAC GCTAACACAA CAAAATTTAT
TTATGAATAA AACCTGATCT GAACAACTGT TTCATTATAC ATTCTTATTA GCAATGCCCC TTAGGCCTTA CATATTGTAA
CGAAACAACT AAGTTTGCAT AGTTTATCCA GTTTAGAACT TAGATATAGA AATTTTACTC ATAAAATATT TTCATTATAG
TATGAACTTA ATCATTGGCA TTAAGGATTA TTCTTGTAAA ACTTGGCAGG GCACACTAAA CTATTATTTC TTTTCCTTTT
GATCATCAAA TGACTCTTAT CTGTTTAATT AGAATGTTCT TTTAGTTTCC TTTCTTTTGT TGTGATAGTT TCCTGTTAAA
CTTAATTATG TCAAAGTGTG ATGACTGACT CTTTCTCTTG TGGTGCAGCA AAACCATGCC AGTAGAAGAG ATCTTAACCA
TTAATGTGAA GCCTGGCTGG AAGAAGGGAA CAAAGATCAC CTTCCCTGAA AAGGGAAATG AACAGCCAAA TGTGACGCCG
GCCGATCTCG TCTTCATCAT TGACGAAAAG CCACACGGGG TCTTCACCCG TGACGGAAAT GACCTTGTTG TAACGCAGAA
GATTTCCCTT GCAGAGGCCT TAACTGGTTA TACAGTGCAC CTCACCACCC TGGATGGTAG AAACTTAACC ATACCAATCA
GCAATGTTAT TCATCCCAGT TATGAAGAGG TTGTTACAAG AGAAGGCATG CCACTTCCAA AAGATCCATC AAAGAAGGGA
AACTTGAGGA TAAAGTTTAA CATCAAGTTT CCAACTAGGC TCACTGATGA GCAAAAAGCA GGCATCAAGA AGCTCTTGGC
TGCATGAAAA GGCTTGGTTA GTATAGTATT TCAGATTTCC CTCTTATAGC TACTTTAATG AAGATGTAAG ATATAGTAAT
AAACCTTTCC AAGAAAAAAG AATGTACTAA GAAACATTGT TGTTCCTCTA TAAATTGTTT TTTTGAGTGA AAAGTTTTTT
GGTTTGATTC TTTTGTATGG ATTAAAAGTT AATGTGCAGG GCTTTGTAAT CATCCTTGTT CTATTTAGCA GGGATCAACT
GTGTTAGGAT GAGCTCTGAA CTACACTCAG TACAAATTCT TCTTCCAAAT TTTGCTCCAG AGCTTGGAAG TGAAATGTTT
AGTTATTTAA TCAGAAAATT AAAGTTGTAT TTTTAGGGTT ATACTGAAAT ATTAGTTATT GTATTGGAAA GCTTACTTGA
GATATTTATA TCTTCTTTAA TGTGGAAAGC TTACTTCCTC TGTTAGAAGA GATGGATTAA GAAAGTTA

>Vigan.06G125600.01
TTTTTCTGAA AGAGCCTAGA AATAGAAAAT CGTGTAGGTT TCTCGAAACT TCCACCAAAA TCGAGATGCT ACTACACCTG
TAGAACACCA ACTTCAACAC CCTAATGATT TAAACATATC TTTCCACCAT ATCATCAACC TCAAACTCAA AATCTAAGAA
CAAATTCTGA GTTGTCAAAG TGAGATAGAG CATAACTTCA CAGAAAGATT GTGCAACAAC CGCAAAACTG AAGAGAAAGA
GGGTAGAAGA AGAACAAACA CCTTCACGGT CAAAGATGGG TGTGGATTAC TACAAGATCT TGCAGGTTGA TAAAAACGCC
AAAGACGATG ACTTGAAGAA GGCTTACAGG AAACTTGCTA TGAAATGGCA CCCAGATAAA AACCCCAACA ACAAAAAGGA
AGCCGAAGCT AAGTTTAAGC AGATTTCCGA AGCATACGAG GTGCTTAGCG ATCCTCAAAA GAAAGCTATT TATGATCAAT
ATGGAGAAGA GGGTCTGAAA GGTCAGGTTC CTCCTCCTGA TGCTGGTGGT GCTGGAACTA CATACTTTTC CACTGGAGAT
GTTCCGGGAT CTTTTCGGTT CAATCCAAGG AATGCAGATG ACATTTTTGC AGAATTTTTT GGCTTCTCAA GCCCATTTGG
AGGAATGGGT GGGAGAGGTG GTGGCGGCGG AGGCGGAGGC GGCATGAGAT CAAGGTTCCC TGGTGGGATG TTCGGTGATG
ATATGTTTGC ATCTTTTGGG GATGGAACGG TACATATGAG TCAAGGGGCT CCTCGGAAAG CTCCTCCCAT TGAGAACAAG
TTGCCTTGCA CTCTTGAGGA GATATATAGA GGAACTACAA AGAAGATGAA GATCTCTAGA GAAATTGCTG ATGCCAGTGG
CAAAACCATG CCAGTAGAAG AGATCTTAAC CATTAATGTG AAGCCTGGCT GGAAGAAGGG AACAAAGATC ACCTTCCCTG
AAAAGGGAAA TGAACAGCCA AATGTGACGC CGGCCGATCT CGTCTTCATC ATTGACGAAA AGCCACACGG GGTCTTCACC
CGTGACGGAA ATGACCTTGT TGTAACGCAG AAGATTTCCC TTGCAGAGGC CTTAACTGGT TATACAGTGC ACCTCACCAC
CCTGGATGGT AGAAACTTAA CCATACCAAT CAGCAATGTT ATTCATCCCA GTTATGAAGA GGTTGTTACA AGAGAAGGCA
TGCCACTTCC AAAAGATCCA TCAAAGAAGG GAAACTTGAG GATAAAGTTT AACATCAAGT TTCCAACTAG GCTCACTGAT
GAGCAAAAAG CAGGCATCAA GAAGCTCTTG GCTGCATGAA AAGGCTTGGT TAGTATAGTA TTTCAGATTT CCCTCTTATA
GCTACTTTAA TGAAGATGTA AGATATAGTA ATAAACCTTT CCAAGAAAAA AGAATGTACT AAGAAACATT GTTGTTCCTC
TATAAATTGT TTTTTTGAGT GAAAAGTTTT TTGGTTTGAT TCTTTTGTAT GGATTAAAAG TTAATGTGCA GGGCTTTGTA
ATCATCCTTG TTCTATTTAG CAGGGATCAA CTGTGTTAGG ATGAGCTCTG AACTACACTC AGTACAAATT CTTCTTCCAA
ATTTTGCTCC AGAGCTTGGA AGTGAAATGT TTAGTTATTT AATCAGAAAA TTAAAGTTGT ATTTTTAGGG TTATACTGAA
ATATTAGTTA TTGTATTGGA AAGCTTACTT GAGATATTTA TATCTTCTTT AATGTGGAAA GCTTACTTCC TCTGTTAGAA
GAGATGGATT AAGAAAGTTA 

>Vigan.06G125600.01
ATGGGTGTGG ATTACTACAA GATCTTGCAG GTTGATAAAA ACGCCAAAGA CGATGACTTG AAGAAGGCTT ACAGGAAACT
TGCTATGAAA TGGCACCCAG ATAAAAACCC CAACAACAAA AAGGAAGCCG AAGCTAAGTT TAAGCAGATT TCCGAAGCAT
ACGAGGTGCT TAGCGATCCT CAAAAGAAAG CTATTTATGA TCAATATGGA GAAGAGGGTC TGAAAGGTCA GGTTCCTCCT
CCTGATGCTG GTGGTGCTGG AACTACATAC TTTTCCACTG GAGATGTTCC GGGATCTTTT CGGTTCAATC CAAGGAATGC
AGATGACATT TTTGCAGAAT TTTTTGGCTT CTCAAGCCCA TTTGGAGGAA TGGGTGGGAG AGGTGGTGGC GGCGGAGGCG
GAGGCGGCAT GAGATCAAGG TTCCCTGGTG GGATGTTCGG TGATGATATG TTTGCATCTT TTGGGGATGG AACGGTACAT
ATGAGTCAAG GGGCTCCTCG GAAAGCTCCT CCCATTGAGA ACAAGTTGCC TTGCACTCTT GAGGAGATAT ATAGAGGAAC
TACAAAGAAG ATGAAGATCT CTAGAGAAAT TGCTGATGCC AGTGGCAAAA CCATGCCAGT AGAAGAGATC TTAACCATTA
ATGTGAAGCC TGGCTGGAAG AAGGGAACAA AGATCACCTT CCCTGAAAAG GGAAATGAAC AGCCAAATGT GACGCCGGCC
GATCTCGTCT TCATCATTGA CGAAAAGCCA CACGGGGTCT TCACCCGTGA CGGAAATGAC CTTGTTGTAA CGCAGAAGAT
TTCCCTTGCA GAGGCCTTAA CTGGTTATAC AGTGCACCTC ACCACCCTGG ATGGTAGAAA CTTAACCATA CCAATCAGCA
ATGTTATTCA TCCCAGTTAT GAAGAGGTTG TTACAAGAGA AGGCATGCCA CTTCCAAAAG ATCCATCAAA GAAGGGAAAC
TTGAGGATAA AGTTTAACAT CAAGTTTCCA ACTAGGCTCA CTGATGAGCA AAAAGCAGGC ATCAAGAAGC TCTTGGCTGC
ATGA

>Vigan.06G125600.01
MGVDYYKILQ VDKNAKDDDL KKAYRKLAMK WHPDKNPNNK KEAEAKFKQI SEAYEVLSDP QKKAIYDQYG EEGLKGQVPP
PDAGGAGTTY FSTGDVPGSF RFNPRNADDI FAEFFGFSSP FGGMGGRGGG GGGGGGMRSR FPGGMFGDDM FASFGDGTVH
MSQGAPRKAP PIENKLPCTL EEIYRGTTKK MKISREIADA SGKTMPVEEI LTINVKPGWK KGTKITFPEK GNEQPNVTPA
DLVFIIDEKP HGVFTRDGND LVVTQKISLA EALTGYTVHL TTLDGRNLTI PISNVIHPSY EEVVTREGMP LPKDPSKKGN
LRIKFNIKFP TRLTDEQKAG IKKLLAA*