VIGGS:GBrowse

Vigan.06G122200.01

Basic Information:

Name:	Vigan.06G122200.01 Multiple alignment Variant Information
Position:	Chr06:23750349..23751880 (+ strand)
Length:	1532

Functional Information:

Description:	Similar to Uncharacterized protein. [I1LS93, Glycine max]
GO:	Biological Process: metabolic process (GO:0008152)
GO:	Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758)
InterPro:	UDP-glucuronosyl/UDP-glucosyltransferase (IPR002213)
Expression level (FPKM):	Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.02,0.37,0.00,0.00,0.00,4.23,0.00

Automatic updates:

Name:	LC017844 NCBI(nuccore)
Organism:	Glycine max
Description:	Glycine max Fg3 mRNA for flavonol 3-O-glycoside (1-2) glucosyltransferase, complete cds, cultivar: Nezumisaya.
PubMed ID:	26002063 NCBI(pubmed)
Status:	Known Variant

Name:	LC017845 NCBI(nuccore)
Organism:	Glycine max
Description:	Glycine max Fg3 mRNA for flavonol 3-O-glycoside (1-2) glucosyltransferase, complete cds, cultivar: Harosoy.
PubMed ID:	26002063 NCBI(pubmed)
Status:	Known Variant

Name:	NM_001359019 NCBI(nuccore)
Organism:	Glycine max
Description:	Glycine max UDP-glycosyltransferase 79B30 (FG3), mRNA.
PubMed ID:	26002063 NCBI(pubmed)
Status:	Known Variant

Structure :

[show][hide]Parts:

Position:	Chr06:23750349..23750851 (+ strand)
Length:	503
Type:	CDS

Position:	Chr06:23751004..23751880 (+ strand)
Length:	877
Type:	CDS

[hide all][show all]SEQUENCES

[show][hide][copy]EXON + INTRON

>Vigan.06G122200.01 class=Sequence position=Chr06:23750349..23751880 (+ strand)
ATGGAGCCAC GTTCTTTGCA CATAGCTATG TATCCATGGC TGGCCATGGG TCACCAAACA GCATTCCTCC ATCTATGCAA
CAAGTTGGCC ATAAGGGGTC ACAGAATCTC CTTCATCACA CCCACAAAAG CACAAGCCAA GTTGGAACCA TACAACTTGC
ATCCTCACTT GATCACATTC GTTACCATCA CTGTTCCTCA CGTTGAAGGT CTTCCCCCTG ATGCACAGAC CACTGCAGAT
GTCACTTACC CTTTGCAACC AAACATCATG ACAGCCATGG ATCTAACCAA AGATGACATA GAAACCCTTC TCACTGATCT
CAAACCTGAA CTTGTTTTCT ATGACTTCAC ACATTGGATG CCAACCTTGA CCAAGAAATT AGGCATCAAG GCCGTGCACT
ATTGCACTGC TAGCTCTGTA ATGATTGGTT ACACTCTTCC ACCAGCCAGA TATTACCAAG GGATTGACCT ATCAGAAAGT
AACCTCATGG AACCCCCAGA AGGGTACTCT CCTAATCATC AATACACTTT CACATAGGTT TTAAATATTT AGACTTTTTC
TTTAAGTTTT ATATTTATTA GGTTTCAAAG ATATAGATAT GAATTATATG AATATGTTGT GCAGTTATGA TTGGTATCTG
AAATATGTAA CACAGGTACC CTGACTCTTC CATCAAGCTT CATGCTCATG AGGCTCGTGC CTTTGCCGGG AAAAGAAAGG
ACACGTTTGG GAGCGATGTT CTCTTCTACG ATCGCCAGTT CATAGCACTG AATGAAGCTG ATGTGTTGGC ATACAGAACA
TGCAGAGAAA TCGAAGGGCC TTATCTTGAT TACATTGGAA GCCAGTTCAA GAAGCCTGTG CTGGCAACTG GTCCAGTTAT
TCTAGAGCCA CCAACCTCTG AGTTGGAGGA AAAATTCTCC ACATGGCTTG GAGGGTTTGA GGAAGGATCG GTGGTTTATT
GTTGTTTTGG GAGTGAGTGC ACTTTGAGGT TAGAGCAGTT CCAAGAGCTG GTGCTTGGTC TTGAGCTGAC TGGCATGCCA
TTCTTGGCAG CAGTGAAGGC CCCAGTAGGG TTTGAGACAG TGGAATCAGC AATGCCTGAA GGGTTTGAGG AGAGGGCTAA
AGGGAGAGGG TTTGTGTATG GAGGTTGGGT TATGCAACAG TTGATTCTTG CACACCCTTC TGTGGGGTGT TTCATCACAC
ATTGTGGTTC TGGTTCTTTG TCTGAGGCAC TGGTGAACAA GTGTCAGTTG GTACTGCTGC CTAATGTTGG TGATCAGATT
CTGAATGCAA GGATGATGGC CAACAACTTA GAGGTTGGTG TGGAAGTTGA GAAGGATGAG AATGGAAATT ACACAAAGGA
GAGTGTGTGC AAAGCTGTGA GCATTGTGAT GGATGAGGAG AATGAAACCA GCAAGAAGGT GAGAGATAAT CACACTAAGC
TCAGAGAGAC CCTCCTTGAC ATAAATTTGG AGTCTTGTTA TCTTGACAAC CTTTGCAGCA GACTCCAAGA GATAGTTGAT
GAAGGAGTTT AA

[show][hide][copy]TRANSCRIPT

>Vigan.06G122200.01
ATGGAGCCAC GTTCTTTGCA CATAGCTATG TATCCATGGC TGGCCATGGG TCACCAAACA GCATTCCTCC ATCTATGCAA
CAAGTTGGCC ATAAGGGGTC ACAGAATCTC CTTCATCACA CCCACAAAAG CACAAGCCAA GTTGGAACCA TACAACTTGC
ATCCTCACTT GATCACATTC GTTACCATCA CTGTTCCTCA CGTTGAAGGT CTTCCCCCTG ATGCACAGAC CACTGCAGAT
GTCACTTACC CTTTGCAACC AAACATCATG ACAGCCATGG ATCTAACCAA AGATGACATA GAAACCCTTC TCACTGATCT
CAAACCTGAA CTTGTTTTCT ATGACTTCAC ACATTGGATG CCAACCTTGA CCAAGAAATT AGGCATCAAG GCCGTGCACT
ATTGCACTGC TAGCTCTGTA ATGATTGGTT ACACTCTTCC ACCAGCCAGA TATTACCAAG GGATTGACCT ATCAGAAAGT
AACCTCATGG AACCCCCAGA AGGGTACCCT GACTCTTCCA TCAAGCTTCA TGCTCATGAG GCTCGTGCCT TTGCCGGGAA
AAGAAAGGAC ACGTTTGGGA GCGATGTTCT CTTCTACGAT CGCCAGTTCA TAGCACTGAA TGAAGCTGAT GTGTTGGCAT
ACAGAACATG CAGAGAAATC GAAGGGCCTT ATCTTGATTA CATTGGAAGC CAGTTCAAGA AGCCTGTGCT GGCAACTGGT
CCAGTTATTC TAGAGCCACC AACCTCTGAG TTGGAGGAAA AATTCTCCAC ATGGCTTGGA GGGTTTGAGG AAGGATCGGT
GGTTTATTGT TGTTTTGGGA GTGAGTGCAC TTTGAGGTTA GAGCAGTTCC AAGAGCTGGT GCTTGGTCTT GAGCTGACTG
GCATGCCATT CTTGGCAGCA GTGAAGGCCC CAGTAGGGTT TGAGACAGTG GAATCAGCAA TGCCTGAAGG GTTTGAGGAG
AGGGCTAAAG GGAGAGGGTT TGTGTATGGA GGTTGGGTTA TGCAACAGTT GATTCTTGCA CACCCTTCTG TGGGGTGTTT
CATCACACAT TGTGGTTCTG GTTCTTTGTC TGAGGCACTG GTGAACAAGT GTCAGTTGGT ACTGCTGCCT AATGTTGGTG
ATCAGATTCT GAATGCAAGG ATGATGGCCA ACAACTTAGA GGTTGGTGTG GAAGTTGAGA AGGATGAGAA TGGAAATTAC
ACAAAGGAGA GTGTGTGCAA AGCTGTGAGC ATTGTGATGG ATGAGGAGAA TGAAACCAGC AAGAAGGTGA GAGATAATCA
CACTAAGCTC AGAGAGACCC TCCTTGACAT AAATTTGGAG TCTTGTTATC TTGACAACCT TTGCAGCAGA CTCCAAGAGA
TAGTTGATGA AGGAGTTTAA

[show][hide][copy]CDS

>Vigan.06G122200.01
ATGGAGCCAC GTTCTTTGCA CATAGCTATG TATCCATGGC TGGCCATGGG TCACCAAACA GCATTCCTCC ATCTATGCAA
CAAGTTGGCC ATAAGGGGTC ACAGAATCTC CTTCATCACA CCCACAAAAG CACAAGCCAA GTTGGAACCA TACAACTTGC
ATCCTCACTT GATCACATTC GTTACCATCA CTGTTCCTCA CGTTGAAGGT CTTCCCCCTG ATGCACAGAC CACTGCAGAT
GTCACTTACC CTTTGCAACC AAACATCATG ACAGCCATGG ATCTAACCAA AGATGACATA GAAACCCTTC TCACTGATCT
CAAACCTGAA CTTGTTTTCT ATGACTTCAC ACATTGGATG CCAACCTTGA CCAAGAAATT AGGCATCAAG GCCGTGCACT
ATTGCACTGC TAGCTCTGTA ATGATTGGTT ACACTCTTCC ACCAGCCAGA TATTACCAAG GGATTGACCT ATCAGAAAGT
AACCTCATGG AACCCCCAGA AGGGTACCCT GACTCTTCCA TCAAGCTTCA TGCTCATGAG GCTCGTGCCT TTGCCGGGAA
AAGAAAGGAC ACGTTTGGGA GCGATGTTCT CTTCTACGAT CGCCAGTTCA TAGCACTGAA TGAAGCTGAT GTGTTGGCAT
ACAGAACATG CAGAGAAATC GAAGGGCCTT ATCTTGATTA CATTGGAAGC CAGTTCAAGA AGCCTGTGCT GGCAACTGGT
CCAGTTATTC TAGAGCCACC AACCTCTGAG TTGGAGGAAA AATTCTCCAC ATGGCTTGGA GGGTTTGAGG AAGGATCGGT
GGTTTATTGT TGTTTTGGGA GTGAGTGCAC TTTGAGGTTA GAGCAGTTCC AAGAGCTGGT GCTTGGTCTT GAGCTGACTG
GCATGCCATT CTTGGCAGCA GTGAAGGCCC CAGTAGGGTT TGAGACAGTG GAATCAGCAA TGCCTGAAGG GTTTGAGGAG
AGGGCTAAAG GGAGAGGGTT TGTGTATGGA GGTTGGGTTA TGCAACAGTT GATTCTTGCA CACCCTTCTG TGGGGTGTTT
CATCACACAT TGTGGTTCTG GTTCTTTGTC TGAGGCACTG GTGAACAAGT GTCAGTTGGT ACTGCTGCCT AATGTTGGTG
ATCAGATTCT GAATGCAAGG ATGATGGCCA ACAACTTAGA GGTTGGTGTG GAAGTTGAGA AGGATGAGAA TGGAAATTAC
ACAAAGGAGA GTGTGTGCAA AGCTGTGAGC ATTGTGATGG ATGAGGAGAA TGAAACCAGC AAGAAGGTGA GAGATAATCA
CACTAAGCTC AGAGAGACCC TCCTTGACAT AAATTTGGAG TCTTGTTATC TTGACAACCT TTGCAGCAGA CTCCAAGAGA
TAGTTGATGA AGGAGTTTAA

[show][hide][copy]PROTEIN

>Vigan.06G122200.01
MEPRSLHIAM YPWLAMGHQT AFLHLCNKLA IRGHRISFIT PTKAQAKLEP YNLHPHLITF VTITVPHVEG LPPDAQTTAD
VTYPLQPNIM TAMDLTKDDI ETLLTDLKPE LVFYDFTHWM PTLTKKLGIK AVHYCTASSV MIGYTLPPAR YYQGIDLSES
NLMEPPEGYP DSSIKLHAHE ARAFAGKRKD TFGSDVLFYD RQFIALNEAD VLAYRTCREI EGPYLDYIGS QFKKPVLATG
PVILEPPTSE LEEKFSTWLG GFEEGSVVYC CFGSECTLRL EQFQELVLGL ELTGMPFLAA VKAPVGFETV ESAMPEGFEE
RAKGRGFVYG GWVMQQLILA HPSVGCFITH CGSGSLSEAL VNKCQLVLLP NVGDQILNAR MMANNLEVGV EVEKDENGNY
TKESVCKAVS IVMDEENETS KKVRDNHTKL RETLLDINLE SCYLDNLCSR LQEIVDEGV*