GBrowse Details

Vigan.06G119600.01

Basic Information:
Name: Vigan.06G119600.01
Multiple alignment
Variant Information
Position: Chr06:23292654..23296206 (+ strand)
Length: 3553
Functional Information:
Description: Similar to Uncharacterized protein. [I1KET7, Glycine max]
InterPro: PMR5 N-terminal domain (IPR025846)
PC-Esterase (IPR026057)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.07,0.00,6.50,11.31,9.14,6.34,60.26,21.60
Automatic updates:
Name: NM_001254609 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100786668 (LOC100786668), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:23292654..23292860 (+ strand)
Length: 207
Type: five_prime_UTR
Position: Chr06:23292861..23293126 (+ strand)
Length: 266
Type: CDS
Position: Chr06:23293348..23293519 (+ strand)
Length: 172
Type: CDS
Position: Chr06:23294896..23295071 (+ strand)
Length: 176
Type: CDS
Position: Chr06:23295149..23295307 (+ strand)
Length: 159
Type: CDS
Position: Chr06:23295560..23295848 (+ strand)
Length: 289
Type: CDS
Position: Chr06:23295849..23296206 (+ strand)
Length: 358
Type: three_prime_UTR

>Vigan.06G119600.01 class=Sequence position=Chr06:23292654..23296206 (+ strand)
AAAAATATAT ATTAAACACT AAAAAACAAC AGGAAACGAG GAAACATTGC AAGTTGTTCT GTTTTCACAT TGCATGTGCA
TTCGTTTGTG AAACACCTCT TTCTCCTTCT CTCACGGTTC CATTATATAA GACCTTGATT TGGGGGCAAG TTTCTATTGA
CTCCTCGTCC TTTCAAAGAA TCACGGGGAG GGTTCAGAAC CCGAGAAATG GGTCTGTCAT TGGTACATGC TCTGTTCTTA
ACTCTGTTTC TCCTCTGCCT CAAAACAAAA GCAGAGGACT CTAGTCCAAC CAGAAAGCTC GCAGGAGCAT GCAACTTGTT
CAGAGGGAAA TGGGTCTACG ATGCTTCATA CCCTCTCTAT GACCCTTCTT CTTGTCCCTT CGTAGATCCA CAGTTCAATT
GCCAAAAGCA TGGTCGCTCT GATCAACTCT ACCAGAAATA TAGGTGGACG CCATTTTCTT GTCCCTTGCC AAGGTACCAC
CTTTCTTTCT CTCATTATTC ATTGAACAAA ATCTTAGCAT TTTTTCGCTT GTTTTTCAAT CCTCTGTTTT TGAGATAAAA
CTTGAGAAGA CAACACAAGA TGTAAGAAAA TGTATCTAGA TTTTGTTTTT AATTGTTGTA GTCTTTTTAT ATGCATTGTC
CTTGTCATGT TATGGTCCTA GGTTAAGTGG GGTAGTGAAA TTTTTGTTGT GCAGGTTCAA TGGATTGGAC TTTTTGCAGA
GATACAGAGG GAAGAAGATT ATGTTTGTTG GTGACTCCTT GAGCTTGAAC CAGTTCAATT CATTGGCATG TATGATTCAT
GCTTGGGTGC CAAAATCTAG GAGCACTTTC AGTCAAAGGG ATGCTCTTTC CAAAGTGACA TTTGAGGTTG GTTATTTCAT
TCTTGTGCTT TACTTTATTT ATTTTTCTGG CGCAGTGATT TGAAAGTTTG AATTTTTTGG TGGTAATGTT TGTTTTGTGT
GTGACTTCCC TCTCTTTGCT TTCCTCCAAA GTTCAAAACT TTTCTGAGCC ATTTCCATTT TTGAACTGAA ATTCTGCAAC
CCTCAAATCT GATCTTATTT GGGTATTTGA ATTCAGAACT TGGTGTGGTG CATGTGCATA TTTTTAGCAG CTGTGTGACA
CTGTGCAGTG AGGTGAGAGA AGTAAAGGTG AGATGTGATT GGTGGGAAGG CTTTGCTTTT TGCTGGGGAC AATTCTGATT
GTTTATTTAA GAGATAATAA ATGTTTGTGT CTTAATATAT TTTACTAAAA ATACTTCTTT TCACTCTCTC TCTCTCTCTC
TCTCAAATTC AAACAACTTA GAAAATAAAA AATTAAAAAC TATTATGTTT GTTTCTGGAT TTTTACTGTT ATACGTGGAG
TTTCATTTTC CACATATTCA TTTGGTTTAG TAGAAAAGGG AAACTTTTTT ACCTCACATT CAAAACCAAG AAAAGTTACC
TTTTTTTTCT CCTCTTACCC AGAAAACCTC AATTTTTATT ACTTCCATAA AATTATCAAA TTGTTTGATA AAGTTTTAAA
ATTATTAAAC TTTAAATGAT TATAAATTTC ACATTTTTTT TTTCATTTCA ATGAAGAGTT TTGAAGCATC TACTATGAAA
ATCCAGTTGC TTTACGTAGA AATTTTGTCT AACAATTGCT TCAATTAGTA ATGATTGATG TTGAAGATTT AATTTTGCCT
CTTTATCGGA TTGTAGCATT GAACATCATT GGCTGTAACT GAATTATGAG TAAGACAGCG TCCGACACCA TTATTCAACA
AAACCGTTTT TATAGCTTTC TGCAAATCAA ATGAATAATA ATTTGATATC TGCACTTTTT TTCCAACCAC AAAATCTTAT
TCTATGATCC ATTATGTTTG TTTATCATAT AAGCTTCCAT TATGCTATTA CGTATACAAC AGATATAATT ATTCATAATT
GCGTGTGGGT TAATGGGTTT AAAGAAAAAA ACAGTTGAAT CACAATGTTA AGAAGCATAT TTGCTTTGAG AACTCTGCAA
TTTAGAAGTT TTTTCATTTG AAAAAAAAAT GTTTTTTCAA CAATTTTTTT AATAATTTTT TACAACACTT ATACGATAGT
TTGTGGTGAT TAGTTTGATT GATCGTTTAA AATATATATA TATATTAATA AAATAATGAT ACATAATTTA TTATAAAAAA
TTATTAAGAA AAATTGTTAA CGTATCATGA TAAAAATAAA TAAATTTTTT ATTATAAATC AGAAAGTTGT GATTTTTTTC
AGGACTATGG CCTTGAGATA TACTTGTACA GAACAGCATA TTTAGTGGAT CTTGACCGTG AGAAAGTGGG ACGAGTTTTG
AAACTAGACT CTATCAAGAA CGGTGACTCG TGGATGGGGA TGGACGCGCT GATCTTCAAC ACGTGGCACT GGTGGACCCA
CACCGGAAGC TCACAACCGT ACGATGATTC TCTCAGTACA GTTTTCCAAT TTGAATGGTT AATGAGTGAC AGTGATTTGT
AAATATTGAT GACAGGTGGG ACTATGTTGA GGTGGATAAT AGGTTGTTCA AAGACATGAA CCGTTTTGTT GCATACTATA
AAGGCCTAAC AACTTGGGCT AAGTGGATTG AAAGAAACGT CAATCCATCA CAAACCAAGG TCTTCTTCTT GGGAATTTCT
CCTGTGCATT ACCAGTAAGT TCTCACCAAT GTATAAGATA AAAGATCTAT AAATTTATTA TTTTAAAATT TTAAATTAGA
AGTAATACGA TCCCTTACGA GGTTTTATTG TTAAATATTT TGAATGAAGA CCAAAATTAT GTTTAGTCCA TGAGTTTATG
GTGAATTAAA TAAGTGATCA GTATGCATGG GCTTAATATA TAGTACGTAA ATTGAATGAG AATGTAAAGT GGAAGTTTTG
AATTAGTGAT GTAATGTGGT GATTAGGGGG AGAGATTGGA ATGAACCGGC AAAGTCATGT ATGAGTGAAA GAGAACCATT
CTTTGGACTG AAGTACCCTG CAGGAACACC GATGGCTTGG GTGGTGGTGA ACAAAGTTTT GAAGAGGATA AAAAAACCTG
TGTATTTCTT GGATGTGACC ACACTCTCAC AGTACAGAAA AGATGCACAC CCTGAAGTCT ATAGTGGAGT TATGGCAGTA
GATTGCAGCC ACTGGTGTCT TCCAGGGCTT CCTGACACTT GGAATGAACT TCTCACTGCA GTTCTTTCTG CTTGAAAACA
AACACATATA ACTTTGTTTA CTAGCTCCAA CTTCTTAGAG GAAAACCAAT TGTTTTCGAC TTTAGGAGAT TTTTATTTCG
CATTTTGCTT CTCTTGTAAT TCTTCAATAA AAGGGCTTTA TGCTCCTAAT TGTAAATGTA GATCAATGTG GCAGAAATTT
GCCTTCAATT GTACCAAATA CCATTCTCAA TTTGAAACTC ATTGTGGAAA CATGTGTCAC TCGTTGTAAA GTTGTTGATC
GATCCCCTTT TCTAAAGTAA CAAAAAATTA TGTAATGTGG ATTTTTCAGA TGAAAATTGT ACCCTTTTAA AAATTTTAAG
TTCTGTATAT GAATTTGATG TATTTTAATA GTT

>Vigan.06G119600.01
AAAAATATAT ATTAAACACT AAAAAACAAC AGGAAACGAG GAAACATTGC AAGTTGTTCT GTTTTCACAT TGCATGTGCA
TTCGTTTGTG AAACACCTCT TTCTCCTTCT CTCACGGTTC CATTATATAA GACCTTGATT TGGGGGCAAG TTTCTATTGA
CTCCTCGTCC TTTCAAAGAA TCACGGGGAG GGTTCAGAAC CCGAGAAATG GGTCTGTCAT TGGTACATGC TCTGTTCTTA
ACTCTGTTTC TCCTCTGCCT CAAAACAAAA GCAGAGGACT CTAGTCCAAC CAGAAAGCTC GCAGGAGCAT GCAACTTGTT
CAGAGGGAAA TGGGTCTACG ATGCTTCATA CCCTCTCTAT GACCCTTCTT CTTGTCCCTT CGTAGATCCA CAGTTCAATT
GCCAAAAGCA TGGTCGCTCT GATCAACTCT ACCAGAAATA TAGGTGGACG CCATTTTCTT GTCCCTTGCC AAGGTTCAAT
GGATTGGACT TTTTGCAGAG ATACAGAGGG AAGAAGATTA TGTTTGTTGG TGACTCCTTG AGCTTGAACC AGTTCAATTC
ATTGGCATGT ATGATTCATG CTTGGGTGCC AAAATCTAGG AGCACTTTCA GTCAAAGGGA TGCTCTTTCC AAAGTGACAT
TTGAGGACTA TGGCCTTGAG ATATACTTGT ACAGAACAGC ATATTTAGTG GATCTTGACC GTGAGAAAGT GGGACGAGTT
TTGAAACTAG ACTCTATCAA GAACGGTGAC TCGTGGATGG GGATGGACGC GCTGATCTTC AACACGTGGC ACTGGTGGAC
CCACACCGGA AGCTCACAAC CGTGGGACTA TGTTGAGGTG GATAATAGGT TGTTCAAAGA CATGAACCGT TTTGTTGCAT
ACTATAAAGG CCTAACAACT TGGGCTAAGT GGATTGAAAG AAACGTCAAT CCATCACAAA CCAAGGTCTT CTTCTTGGGA
ATTTCTCCTG TGCATTACCA GGGGAGAGAT TGGAATGAAC CGGCAAAGTC ATGTATGAGT GAAAGAGAAC CATTCTTTGG
ACTGAAGTAC CCTGCAGGAA CACCGATGGC TTGGGTGGTG GTGAACAAAG TTTTGAAGAG GATAAAAAAA CCTGTGTATT
TCTTGGATGT GACCACACTC TCACAGTACA GAAAAGATGC ACACCCTGAA GTCTATAGTG GAGTTATGGC AGTAGATTGC
AGCCACTGGT GTCTTCCAGG GCTTCCTGAC ACTTGGAATG AACTTCTCAC TGCAGTTCTT TCTGCTTGAA AACAAACACA
TATAACTTTG TTTACTAGCT CCAACTTCTT AGAGGAAAAC CAATTGTTTT CGACTTTAGG AGATTTTTAT TTCGCATTTT
GCTTCTCTTG TAATTCTTCA ATAAAAGGGC TTTATGCTCC TAATTGTAAA TGTAGATCAA TGTGGCAGAA ATTTGCCTTC
AATTGTACCA AATACCATTC TCAATTTGAA ACTCATTGTG GAAACATGTG TCACTCGTTG TAAAGTTGTT GATCGATCCC
CTTTTCTAAA GTAACAAAAA ATTATGTAAT GTGGATTTTT CAGATGAAAA TTGTACCCTT TTAAAAATTT TAAGTTCTGT
ATATGAATTT GATGTATTTT AATAGTT

>Vigan.06G119600.01
ATGGGTCTGT CATTGGTACA TGCTCTGTTC TTAACTCTGT TTCTCCTCTG CCTCAAAACA AAAGCAGAGG ACTCTAGTCC
AACCAGAAAG CTCGCAGGAG CATGCAACTT GTTCAGAGGG AAATGGGTCT ACGATGCTTC ATACCCTCTC TATGACCCTT
CTTCTTGTCC CTTCGTAGAT CCACAGTTCA ATTGCCAAAA GCATGGTCGC TCTGATCAAC TCTACCAGAA ATATAGGTGG
ACGCCATTTT CTTGTCCCTT GCCAAGGTTC AATGGATTGG ACTTTTTGCA GAGATACAGA GGGAAGAAGA TTATGTTTGT
TGGTGACTCC TTGAGCTTGA ACCAGTTCAA TTCATTGGCA TGTATGATTC ATGCTTGGGT GCCAAAATCT AGGAGCACTT
TCAGTCAAAG GGATGCTCTT TCCAAAGTGA CATTTGAGGA CTATGGCCTT GAGATATACT TGTACAGAAC AGCATATTTA
GTGGATCTTG ACCGTGAGAA AGTGGGACGA GTTTTGAAAC TAGACTCTAT CAAGAACGGT GACTCGTGGA TGGGGATGGA
CGCGCTGATC TTCAACACGT GGCACTGGTG GACCCACACC GGAAGCTCAC AACCGTGGGA CTATGTTGAG GTGGATAATA
GGTTGTTCAA AGACATGAAC CGTTTTGTTG CATACTATAA AGGCCTAACA ACTTGGGCTA AGTGGATTGA AAGAAACGTC
AATCCATCAC AAACCAAGGT CTTCTTCTTG GGAATTTCTC CTGTGCATTA CCAGGGGAGA GATTGGAATG AACCGGCAAA
GTCATGTATG AGTGAAAGAG AACCATTCTT TGGACTGAAG TACCCTGCAG GAACACCGAT GGCTTGGGTG GTGGTGAACA
AAGTTTTGAA GAGGATAAAA AAACCTGTGT ATTTCTTGGA TGTGACCACA CTCTCACAGT ACAGAAAAGA TGCACACCCT
GAAGTCTATA GTGGAGTTAT GGCAGTAGAT TGCAGCCACT GGTGTCTTCC AGGGCTTCCT GACACTTGGA ATGAACTTCT
CACTGCAGTT CTTTCTGCTT GA

>Vigan.06G119600.01
MGLSLVHALF LTLFLLCLKT KAEDSSPTRK LAGACNLFRG KWVYDASYPL YDPSSCPFVD PQFNCQKHGR SDQLYQKYRW
TPFSCPLPRF NGLDFLQRYR GKKIMFVGDS LSLNQFNSLA CMIHAWVPKS RSTFSQRDAL SKVTFEDYGL EIYLYRTAYL
VDLDREKVGR VLKLDSIKNG DSWMGMDALI FNTWHWWTHT GSSQPWDYVE VDNRLFKDMN RFVAYYKGLT TWAKWIERNV
NPSQTKVFFL GISPVHYQGR DWNEPAKSCM SEREPFFGLK YPAGTPMAWV VVNKVLKRIK KPVYFLDVTT LSQYRKDAHP
EVYSGVMAVD CSHWCLPGLP DTWNELLTAV LSA*