GBrowse Details

Vigan.06G113700.01

Basic Information:
Name: Vigan.06G113700.01
Multiple alignment
Variant Information
Position: Chr06:22004429..22010335 (+ strand)
Length: 5907
Functional Information:
Description: Similar to Uncharacterized protein. [I1LSG9, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: cysteamine dioxygenase activity (GO:0047800)
InterPro: RmlC-like cupin domain (IPR011051)
Cysteamine dioxygenase (IPR012864)
RmlC-like jelly roll fold (IPR014710)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.70,0.81,1.97,1.08,135.98,6.05,4.02,2.61
Arabidopsis thaliana homolog: AT2G42670.2
Automatic updates:
Name: NM_001254613 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 2-aminoethanethiol dioxygenase-like (LOC100805101), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:22004429..22005816 (+ strand)
Length: 1388
Type: five_prime_UTR
Position: Chr06:22005817..22005919 (+ strand)
Length: 103
Type: CDS
Position: Chr06:22006722..22006867 (+ strand)
Length: 146
Type: CDS
Position: Chr06:22006980..22007127 (+ strand)
Length: 148
Type: CDS
Position: Chr06:22009492..22009695 (+ strand)
Length: 204
Type: CDS
Position: Chr06:22009787..22009905 (+ strand)
Length: 119
Type: CDS
Position: Chr06:22009906..22010335 (+ strand)
Length: 430
Type: three_prime_UTR

>Vigan.06G113700.01 class=Sequence position=Chr06:22004429..22010335 (+ strand)
AAAAAAATTG AATCTTTATT CCCTATTTGA AGGATAAAGT TATGTAAAAC TATTGTACCA TGCTGGTTCG TTACACCTTG
TAGACAGGAA ATGAGAGGCA CGTTTGTCAT TTTCCTTTTA ACAGCTGTGA AAAACATACG AAAGAAAAAA GGTGGTCGGG
GAACAGCTGG ACTTCAAAAA CGGCTCAAAA AATCTCACAA AAGGCAAACC TGCAATTCCT TTTCTCAATT TTTTTTTTCA
TTTCAACCAA ACAGAAAATA AAACACACAC ACACTGATGA CGTGTCCAAG ATCTTCCTTG GGCCTTTTTC TTTTCACCTC
CAACCCTTTC ACAGTCACAA CAACGATCCC TCTCTTCATC CTTCTATGCA CGTCCATTCA TCTTCCTTCA ACAGCCCCTT
CATCTTCTTC TTCTCATTCC TCTGCTAATC CACCATGTTC CTCACCCTTT TCTCTCTCTA ATCATGCCTC TCCCAGGTAC
CTTCTTCTTC TGCATCTCCC ACCCTTCCCC TTCTTCTGTC GGAATCTCAT TTGCCCCATT TCAGATTTTG ATCCAAAATC
CCTTTTTGAT CACTTTGCTC GCCCTTTCAC CTCGCTACTT CTGTGGGGTC ACTCTCTATT TCTCGTTTTG GAAATCTTCC
CTGCTTTAAT TAATTAACTA GCGGTGTTCA TGTTGTTTAT GACGCAAATA AATAAAAAAA TAAATAAAAA TTTGTGTTTT
GTTCTTGGAA TATCACATTG GGTTCTGGGA GGTGTGCTTT ATGGAGTGGA AGTTATGGAG AGTCTCACGT TGGTTTTATC
TGTGCTGGGT TTTACTTAAT TTTGATCTAA AAGTGAGTTC CTTTTGGTGA ATGTATATAA TAATAGTGGA GTAAAGAGTG
GATGCACCAA CTGATCCAAT CATAAATCAT CATGTATGGT GTGGTTTGTT AATTTTACCA TAAATACCTT AAAAGTAATG
AGTTGACAGT GTGAGCTTTT TTATACTGAT AATGTAACTT TTGCAATGAT TGCCTCAAAA TGCAATTGAT TGTTAATGCT
TTTGAATGAA TTGACGGGGA TTCTATTGGC TATATCGGTA TTACTTCGTG ATCTGTGGTT GCACTTGCTG TGATATGTCT
ATATTTGAAG TAGAGGTCAT TGATTTTTGG CTCGTTATTG CTTTTTCCTT GTTCAATAGA TCCATTAGTT TGAATTGTTG
CGAAGGAAAC ATTACGACCA TGCAGATTCA TTACCGATGG TTTGATTCTG AGGCTAAAAT ACGGTTGTTA TCTAATTGTA
TATCCAGTCC CTATTGCAAT CAGTAAGCCA CTTACAAGGT GTTATCAGCT TGCTGACCCT GGGGATTTTG GTCCGAGTGA
ATAGATAACT TGGTCTCAAG TTTGCAAGAT GCCATATTAT ATACAGAGAC TTTATAGGCT ATGCAATGCA TCCTTTTCAT
CTGATGGACC TGTGTCGGAA GAGGTCATTG AGAAAGTTCG TGAGAAGTTA GGTATATTTC CTTTTTGACT TGTTTATCTT
GCTTTTATAT TCATTTTTAT GGTTAACTTT TAGAATGTTT TATGATGTAC AAAAAAAGTT AGTTCTGGAT TATTGATTGT
TCTATACTTT GTCAATAACT TCAAGCTTTC TTTATTTCCC TCCCTTTTTC CTCTGGATCA CTTGTCTCTA TGCTTTCGTC
AAAACCAGTT TAAGGTATTT GTCTTTTTGA AGGAGTTATA ACCTCAAGGT TGAATTTTGA GGGGGACCGC ACTGTTAGTC
TGCTTGCAAT CCTTTTTCAT TCCTTCTCCT TTTAAGGGTA GGATTTGGGT CACACTTTTA TGTTTAAAGC TAGGATGAAT
TAAACTTGAA GCTTTGTGGT AATTAGAATT TTATTTGTCA CTACAAATTT ACTTGCTTAT TATCTGTTAA TGGATAACGG
AAAAGATTAT CCTTTTGAAA TATATTCTTC TGCTGATGAA CTGTTACCAT CAATTTTTGT GGTGTAAAAT TTGTTTCACT
TGTCAATTTA GATAATGGAT TTTAGTCGAT ACAGTTTTGG ACCTATGTTT TTGAGGTGAG GAAAAGAGGG ATTTGTCATA
AGTTGTATGA TCAAAGTGTG TATCTTCAAT TATTTTCCTT CATCTTGAGA CATGCCTGCG TGGTTTATAG TGCAGACAGA
ATTAACACAT TACTACTAAT ACCTTTATGG TTTCCTATCT TAGTTCTTAG ATTAGATGAC TTTGATCCTG CAGCCCAATA
ATTTTCATGT CTAACAGATA TTTTATTGAT AACCTTACAT AATATTTCTA CAGAGAGAAT CAAGCCGTCA GATGTAGGTC
TTGAACAAGA AGCACAACTA GTTCGGAATT GGCCTGGTCC AGCACTTGAA CGTAATGGGA GCCATCAATC CTTGCCACCT
ATAAAATATT TGCATTTGCA TGAATGTGAC TCCTTCTCTG TAAGTAAAGT CTCATAACTT CAGATCATGT TTACTCTGTC
AGAGATTTTT ATGTATTTGG GCCTTATATT AGCAATACTA ACTGAAGTTT TATTTGCTTT CTCTTTTGCA GATAGGAATT
TTTTGCATGC CCCCCTCGTC TATCATTCCT CTCCATAATC ATCCTGGAAT GACAGTGTTG AGCAAGTTGT TGTATGGCTC
AATGCATGTT AAATCCTATG ATTGGATCGA TGCATCTGGC TCTCCTGATC AATCTGAAGG TCTATTTTCT ATAACTTCAT
ATATTTTACT ATTGCTCTGT TTATGTTTTA GTCTTCCGTA TTTACATGCG AGTGTGATTG ATTGCCCTTT CTCCTTGCAT
TTACCTTCTT AAAGAACTCT AACTCCAGCC TCGTTGAGGT AGAAGAGATG GTAGCATTGT ACTAGGCATC ACCAAAATAT
TCCGATTGGA CAGCTTAGAT AAAAACTGGA GTAATATTAG TTCAGAAATC AATACGTGGC ATATGTCCTT TCTTGATTTT
ATTTGGTATC GTTTGGAGCT TAATGAAGAA TACGTTATGA AAAGGCTAAA GTTGTCATGG CACTGTAAAG TAAACGTGAA
TAAGGATAGA TTGTTGTTCT TAGTTACTCA TCTACTTCCT GATCTATTAC TCTGTACTAT TAAGTGCTTT AATATGTAAG
GAAGTCATAA TGGATTGATA GAACACTCGA CCATTTTGGA TTTATATCAG GGTGGTTACA GTTATAATAT TCAAATCCAT
AAACTGTAGT GAATTTTATC CTTTCTTCAT CTGCTAGTGT GTGTACCAGC GCAAAGACCA AATAAAACAG ACAGAGTCAT
ATTTTGGGAA CTTATATACT CTTAATATTG AAACCTTGCA AGAAGGTCTG AGTGACAATG TTAGACTGAT AAGTGGATAT
GTTCTTCTGT GTGTGTGCAT CAGTAACACT TTCTGAAAAC GCTATCTAAT TCTAGGCCGG TGTTGTTATT TTCGTTTGTC
AATACAAATT CTATTTCATT TTACATATAA CAAGCTCTTT CATAGCACAT ATGAATGGGA CTGGAAAATA AACATTCACC
TAGAATTTTT CCAATCCTTG TTATATATTA ATGTTACTTA AATTCCAAAA GTTTTATCAA AGACCATGTT AAAATTATCT
TATATCATTA TCTAATTAAA ACTGAAATCG CTCATTCCAT ATAAAATTCT ACAAGAATAT TGAGAATTTT TGGAAGTTTG
TACTTCAATG TGAATATATG TATTCCCCAT ACATTTGTAA CTGCCCCTGG ACCTCTAATT TTATTGAATG CAATTTAGAT
GGAACAGATC TAGCCACTAA AATTTGGTTC TTCACAAAAT TAAGTTGGAT TTGAAGATTT ACAGTTTCCT TTTGAAGGAA
ATCACCTAGC TTGTCTTCTT ATTCTTCAGC TCATACATGG GAGTAATCTT TTCCTGAGGT CTTCACCAAG GAACCTTCCT
TGGAAGAGGA ACAAAGTTTG AGTTTCTTTT TAGAAACTTG AAAAGTTTAA AGAATTTTCA TTATCTTCCC TTGTGTGAAG
CTGGAGGTGC TTTCCATCAG AAATCCTTTT GAATTTGAAT GGCTTCTGAT CCTTTGTTTT GCATGTCATA TTCTTCATGT
TGGATAATTT TTTGATGGAT TGACTGATTA TTTATAAATT CTTAAAGCTC TACTTTTATT TATTTTTCTC GTCGTCTATT
ATTTGAGCTT GATTGGCTTC TTCAATACCA TAGTGAACAT AATTGATTGG AGAAGAATTT CGATCTACAT GAGTTGCATC
TTCTAAACTA CTTGTGTCAC TTCTAAACAT TTATTCCTTT TGACAAATCA TAAAGTATAA ACAATAATTT ATCGTGTTCT
TAATGCCTTA TTCTGAACAA TTTAGATTAT TAGTTGTTAA CTTATCAATT GACTTAGAAC ACTAGTGTCA AAGGAATGAA
AAACGAGGGC TAAGAATTTT CTTAGAAGTT GACAAGTCGT CAAGTCCTGG AAGTAGTCTC TCCACTTTCG GGGTAAGGCT
ATGTACAGTA CTACAAATTT CTTTGAATAA ATTCTGGAAT TTACCAATTT ACCATAAAAT ATGAAAGTTG TTGGTCGTGG
AAATGTAGCT GTTTCTTGTT TTACTACCCA CCCAATGAAT CCCCCAAAAT ATTTACTACT AAAATTACAT CAGGGTTATC
TAAAACCAAT GTTATTATTA TTATACCTAA ACCATTTCTG CTATGAAATC ATACTTTTGG TTTACTTGTA AATCAGTGAT
TCTCTGGACA TATAATGACT TGATATATCA GTTTTATGAG TTTGTTGAAA GTAAGTTATG GTATGTTTCT TATGCTATGC
CACTGAAACT GTCTCAAAAA GTAAAAGAAA CAAAAGTTCA TGCCTGCATC TAATTCAGGG TTTTAAATAG CAGACTGCAG
GGGTGGGTGT AGGGACCATA GTAGTTCAGC AGCTACATGT TTGTATGAAT AAGTACTATC CTTTTGTTTT GTGATCAATT
TTCCTTCATT GTATTACCTG TCTTATTTGC CCTAATTTGG TAAGTATTAA TACCCTTTTT TTTATCCTCC TGACACCAAA
AGTTGTTAAT CTGTGATTCA CAGTTCGACC TGCAAAGCTT GTGAAAGATA CTGATATGAC AGCACCAAGC CCCACAACAG
TTCTTTACCC CACCAGTGGA GGAAACATCC ATTGTTTTAG AGCTATAACT CCTTGTGCTA TCTTTGACAT ATTGTCTCCT
CCTTACTCTT CAGAGCATGG AAGACACTGC ACCTACTTCC GGCGATCCCA ACGGAGAGAT CTCCCAGGTA ATCTCATTTA
TCTTCATCAC CAACCAACAT CTAAAACTAT GTTCTGTTAA TCATATTGCA CTATTGCCAA CCATCATTTC CACTGCAGTT
AATGTTGAGT TGGATGGAGT GACGGTTTCT GAAGTGACTT GGTTAGAAGA GTTTCAACCT CCTGATGACT TTGTGATCCG
GAGAGGACTG TACAGGGGTC CAGTTATTAG AACTTGAAAA ATTTTCTTCT TTGATGTGTC TTACACAAAA AGGAAATTGG
CTTATCTTTA GAATACAACA AAGGGAACAG TGGAATGTGC AATAATTATT ATATTCTTTG TCTATGTATG TGAGTCACTG
GAGTGTGTAC ATAATGATGC ACTAGTGTAA TCTATTTACA GACCTCAAAA GTAATCCAGT AGAATAGTTA CGTAATGTTG
AAAAAGTTCT TGCTAGTGGC CATATCAAAA TCTGTTTTCA TGGAGAACAA AAGGGTGCTG TGATTTGGTT ACTGTTTATA
GTAACATTCT GTCATGTTCA GGCTTCTAAT AGTACAAGGT TCTTACATGC GTGTTGACTA TAATGACACT ATTGCACATG
CGTGTTGGCT AAATCATGCT TTATAAAACA TCTATGAAAG TCAACGGATA CGAAATTTTA GATCACA

>Vigan.06G113700.01
AAAAAAATTG AATCTTTATT CCCTATTTGA AGGATAAAGT TATGTAAAAC TATTGTACCA TGCTGGTTCG TTACACCTTG
TAGACAGGAA ATGAGAGGCA CGTTTGTCAT TTTCCTTTTA ACAGCTGTGA AAAACATACG AAAGAAAAAA GGTGGTCGGG
GAACAGCTGG ACTTCAAAAA CGGCTCAAAA AATCTCACAA AAGGCAAACC TGCAATTCCT TTTCTCAATT TTTTTTTTCA
TTTCAACCAA ACAGAAAATA AAACACACAC ACACTGATGA CGTGTCCAAG ATCTTCCTTG GGCCTTTTTC TTTTCACCTC
CAACCCTTTC ACAGTCACAA CAACGATCCC TCTCTTCATC CTTCTATGCA CGTCCATTCA TCTTCCTTCA ACAGCCCCTT
CATCTTCTTC TTCTCATTCC TCTGCTAATC CACCATGTTC CTCACCCTTT TCTCTCTCTA ATCATGCCTC TCCCAGGTAC
CTTCTTCTTC TGCATCTCCC ACCCTTCCCC TTCTTCTGTC GGAATCTCAT TTGCCCCATT TCAGATTTTG ATCCAAAATC
CCTTTTTGAT CACTTTGCTC GCCCTTTCAC CTCGCTACTT CTGTGGGGTC ACTCTCTATT TCTCGTTTTG GAAATCTTCC
CTGCTTTAAT TAATTAACTA GCGGTGTTCA TGTTGTTTAT GACGCAAATA AATAAAAAAA TAAATAAAAA TTTGTGTTTT
GTTCTTGGAA TATCACATTG GGTTCTGGGA GGTGTGCTTT ATGGAGTGGA AGTTATGGAG AGTCTCACGT TGGTTTTATC
TGTGCTGGGT TTTACTTAAT TTTGATCTAA AAGTGAGTTC CTTTTGGTGA ATGTATATAA TAATAGTGGA GTAAAGAGTG
GATGCACCAA CTGATCCAAT CATAAATCAT CATGTATGGT GTGGTTTGTT AATTTTACCA TAAATACCTT AAAAGTAATG
AGTTGACAGT GTGAGCTTTT TTATACTGAT AATGTAACTT TTGCAATGAT TGCCTCAAAA TGCAATTGAT TGTTAATGCT
TTTGAATGAA TTGACGGGGA TTCTATTGGC TATATCGGTA TTACTTCGTG ATCTGTGGTT GCACTTGCTG TGATATGTCT
ATATTTGAAG TAGAGGTCAT TGATTTTTGG CTCGTTATTG CTTTTTCCTT GTTCAATAGA TCCATTAGTT TGAATTGTTG
CGAAGGAAAC ATTACGACCA TGCAGATTCA TTACCGATGG TTTGATTCTG AGGCTAAAAT ACGGTTGTTA TCTAATTGTA
TATCCAGTCC CTATTGCAAT CAGTAAGCCA CTTACAAGGT GTTATCAGCT TGCTGACCCT GGGGATTTTG GTCCGAGTGA
ATAGATAACT TGGTCTCAAG TTTGCAAGAT GCCATATTAT ATACAGAGAC TTTATAGGCT ATGCAATGCA TCCTTTTCAT
CTGATGGACC TGTGTCGGAA GAGGTCATTG AGAAAGTTCG TGAGAAGTTA GAGAGAATCA AGCCGTCAGA TGTAGGTCTT
GAACAAGAAG CACAACTAGT TCGGAATTGG CCTGGTCCAG CACTTGAACG TAATGGGAGC CATCAATCCT TGCCACCTAT
AAAATATTTG CATTTGCATG AATGTGACTC CTTCTCTATA GGAATTTTTT GCATGCCCCC CTCGTCTATC ATTCCTCTCC
ATAATCATCC TGGAATGACA GTGTTGAGCA AGTTGTTGTA TGGCTCAATG CATGTTAAAT CCTATGATTG GATCGATGCA
TCTGGCTCTC CTGATCAATC TGAAGTTCGA CCTGCAAAGC TTGTGAAAGA TACTGATATG ACAGCACCAA GCCCCACAAC
AGTTCTTTAC CCCACCAGTG GAGGAAACAT CCATTGTTTT AGAGCTATAA CTCCTTGTGC TATCTTTGAC ATATTGTCTC
CTCCTTACTC TTCAGAGCAT GGAAGACACT GCACCTACTT CCGGCGATCC CAACGGAGAG ATCTCCCAGT TAATGTTGAG
TTGGATGGAG TGACGGTTTC TGAAGTGACT TGGTTAGAAG AGTTTCAACC TCCTGATGAC TTTGTGATCC GGAGAGGACT
GTACAGGGGT CCAGTTATTA GAACTTGAAA AATTTTCTTC TTTGATGTGT CTTACACAAA AAGGAAATTG GCTTATCTTT
AGAATACAAC AAAGGGAACA GTGGAATGTG CAATAATTAT TATATTCTTT GTCTATGTAT GTGAGTCACT GGAGTGTGTA
CATAATGATG CACTAGTGTA ATCTATTTAC AGACCTCAAA AGTAATCCAG TAGAATAGTT ACGTAATGTT GAAAAAGTTC
TTGCTAGTGG CCATATCAAA ATCTGTTTTC ATGGAGAACA AAAGGGTGCT GTGATTTGGT TACTGTTTAT AGTAACATTC
TGTCATGTTC AGGCTTCTAA TAGTACAAGG TTCTTACATG CGTGTTGACT ATAATGACAC TATTGCACAT GCGTGTTGGC
TAAATCATGC TTTATAAAAC ATCTATGAAA GTCAACGGAT ACGAAATTTT AGATCACA

>Vigan.06G113700.01
ATGCCATATT ATATACAGAG ACTTTATAGG CTATGCAATG CATCCTTTTC ATCTGATGGA CCTGTGTCGG AAGAGGTCAT
TGAGAAAGTT CGTGAGAAGT TAGAGAGAAT CAAGCCGTCA GATGTAGGTC TTGAACAAGA AGCACAACTA GTTCGGAATT
GGCCTGGTCC AGCACTTGAA CGTAATGGGA GCCATCAATC CTTGCCACCT ATAAAATATT TGCATTTGCA TGAATGTGAC
TCCTTCTCTA TAGGAATTTT TTGCATGCCC CCCTCGTCTA TCATTCCTCT CCATAATCAT CCTGGAATGA CAGTGTTGAG
CAAGTTGTTG TATGGCTCAA TGCATGTTAA ATCCTATGAT TGGATCGATG CATCTGGCTC TCCTGATCAA TCTGAAGTTC
GACCTGCAAA GCTTGTGAAA GATACTGATA TGACAGCACC AAGCCCCACA ACAGTTCTTT ACCCCACCAG TGGAGGAAAC
ATCCATTGTT TTAGAGCTAT AACTCCTTGT GCTATCTTTG ACATATTGTC TCCTCCTTAC TCTTCAGAGC ATGGAAGACA
CTGCACCTAC TTCCGGCGAT CCCAACGGAG AGATCTCCCA GTTAATGTTG AGTTGGATGG AGTGACGGTT TCTGAAGTGA
CTTGGTTAGA AGAGTTTCAA CCTCCTGATG ACTTTGTGAT CCGGAGAGGA CTGTACAGGG GTCCAGTTAT TAGAACTTGA

>Vigan.06G113700.01
MPYYIQRLYR LCNASFSSDG PVSEEVIEKV REKLERIKPS DVGLEQEAQL VRNWPGPALE RNGSHQSLPP IKYLHLHECD
SFSIGIFCMP PSSIIPLHNH PGMTVLSKLL YGSMHVKSYD WIDASGSPDQ SEVRPAKLVK DTDMTAPSPT TVLYPTSGGN
IHCFRAITPC AIFDILSPPY SSEHGRHCTY FRRSQRRDLP VNVELDGVTV SEVTWLEEFQ PPDDFVIRRG LYRGPVIRT*