GBrowse Details

Vigan.06G069600.01

Basic Information:
Name: Vigan.06G069600.01
Multiple alignment
Variant Information
Position: Chr06:11078814..11080266 (- strand)
Length: 1453
Functional Information:
Description: Similar to Uncharacterized protein. [I1JWF0, Glycine max]
GO: Molecular Function: N-acetyltransferase activity (GO:0008080)
InterPro: GNAT domain (IPR000182)
Acyl-CoA N-acyltransferase (IPR016181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:137.52,71.20,27.90,24.93,45.47,82.59,20.24,23.44
Arabidopsis thaliana homolog: AT5G13780.1
Automatic updates:
Name: NM_001253096 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max N-alpha-acetyltransferase 11-like (LOC100800073), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:11078814..11079313 (- strand)
Length: 500
Type: three_prime_UTR
Position: Chr06:11079314..11079574 (- strand)
Length: 261
Type: CDS
Position: Chr06:11079906..11080205 (- strand)
Length: 300
Type: CDS
Position: Chr06:11080206..11080266 (- strand)
Length: 61
Type: five_prime_UTR

>Vigan.06G069600.01 class=Sequence position=Chr06:11078814..11080266 (- strand)
GGATAGTGGA GCCCTAATTC GATCATAATC ATCAATAGGG AGTGAGGGAA AAGGGGGAAA AATGGTGTGC ATAAGGAAGG
CGACGGTGAA GGATCTTCTG GCGATGCAGG CTTGCAACCT GTTCTGCCTC CCTGAGAACT ACCAGATGAA GTACTATCTC
TACCATATCC TCTCCTGGCC TCAGCTCCTC TACGTCGCCG AAGACTACAA CGGTCGCATC GTCGGCTACG TCCTCGCCAA
GATGGAGGAA GAGACCACCG ACTGCCACGG CCACATCACC TCCCTCGCCG TCCTCCGCAC CCACCGCAAA CTCGGTCTCG
CCACCAAACT CATGACCGCC GCCCAGAACG CCATGGAACA GGTCCACTGC TAATATATTT CTAGTAACAT TGTTCAATTT
TTAGTTTTAA AATTATAATT AATTATTTCT CATTTAGTGA CATGCAAGCT TGATGCGTTT TCTCAACTGT CATATCAAAC
TGACAAAATA GTTACTGAAG ATTGAATTTG AAAGTTGAAC AATTTTGTGG ATAATTGAAA ATTAAGAGAT AGAAATTACT
TTAAAGAAGA ACGGGATTTT AATTAACTAA AATTTCGAAA AAATATTTAG GGATGACGAA GATTGTAATT AATGAAAAAT
CATATTTATA TATTTTTGTT TTGACTGTCT TATGTTGGAT TCTCTGGCAC AGGTGTTTGG TGCCGAGTAT GTGTCCCTGC
ACGTGCGCAA GAGCAACCGT GCGGCCTTCA ATTTGTACAC CGAGACCTTG GGGTACAAGA TTCATGATGT GGAGGCTAAG
TATTATGCGG ACGGAGAAGA TGCTTATGAC ATGAGGAAGG AGCTTAAAGG GAAGCAGCAC CACCATCATC ATCACCACCA
TCACCACCAC CACCATGAGC ATGGTGGTGG GTGTTGTGGT GGGGAGGTCA AGGGAAATGC TAAAGCCAAC TGAATGAGTG
GTTAACGAGT CTTGGAAAGA AATGAAATGA GAATTTTAGT TTTAAAATTG TTGAATCGTG TTGTGCAAAC TTGCTGTAGA
TTTATCGGGC TGTGTTAGTT CATTTTTAAT AGAATTTTTT CTTTACTGGC TTGGTGAATA TAGACACTCT TTCGGCTTCA
TGATGCTTTG ATTAATAACA AGATTGTTGT CTTTCGGTGT CTTTGTTGTT TTGTCATGAG AATTTATTTT ATTTTCAGTT
CAAGATTTTC TGTGTGGAGA GTAGTTAGTT GCAGGCATTG TGGATCGGTG TCCCGCCGTG TGGAGTGACA TCTATCTTCT
AGTGGGGCTT CATTTTTGTT GCACTAGGGT TCTAGCACAA CTGCAGCTGT TGTGGTCTCT ACTGTCGACA GTTTTGCTGG
GAAAGAGGCA TCTTTTATGC CATTGTTATC ATTGTAATAT TGGGTTCAAG ATCTGTGTTT TAGCTTTCAC TGGATTAGTG
TTGGCGTTTC GGA

>Vigan.06G069600.01
GGATAGTGGA GCCCTAATTC GATCATAATC ATCAATAGGG AGTGAGGGAA AAGGGGGAAA AATGGTGTGC ATAAGGAAGG
CGACGGTGAA GGATCTTCTG GCGATGCAGG CTTGCAACCT GTTCTGCCTC CCTGAGAACT ACCAGATGAA GTACTATCTC
TACCATATCC TCTCCTGGCC TCAGCTCCTC TACGTCGCCG AAGACTACAA CGGTCGCATC GTCGGCTACG TCCTCGCCAA
GATGGAGGAA GAGACCACCG ACTGCCACGG CCACATCACC TCCCTCGCCG TCCTCCGCAC CCACCGCAAA CTCGGTCTCG
CCACCAAACT CATGACCGCC GCCCAGAACG CCATGGAACA GGTGTTTGGT GCCGAGTATG TGTCCCTGCA CGTGCGCAAG
AGCAACCGTG CGGCCTTCAA TTTGTACACC GAGACCTTGG GGTACAAGAT TCATGATGTG GAGGCTAAGT ATTATGCGGA
CGGAGAAGAT GCTTATGACA TGAGGAAGGA GCTTAAAGGG AAGCAGCACC ACCATCATCA TCACCACCAT CACCACCACC
ACCATGAGCA TGGTGGTGGG TGTTGTGGTG GGGAGGTCAA GGGAAATGCT AAAGCCAACT GAATGAGTGG TTAACGAGTC
TTGGAAAGAA ATGAAATGAG AATTTTAGTT TTAAAATTGT TGAATCGTGT TGTGCAAACT TGCTGTAGAT TTATCGGGCT
GTGTTAGTTC ATTTTTAATA GAATTTTTTC TTTACTGGCT TGGTGAATAT AGACACTCTT TCGGCTTCAT GATGCTTTGA
TTAATAACAA GATTGTTGTC TTTCGGTGTC TTTGTTGTTT TGTCATGAGA ATTTATTTTA TTTTCAGTTC AAGATTTTCT
GTGTGGAGAG TAGTTAGTTG CAGGCATTGT GGATCGGTGT CCCGCCGTGT GGAGTGACAT CTATCTTCTA GTGGGGCTTC
ATTTTTGTTG CACTAGGGTT CTAGCACAAC TGCAGCTGTT GTGGTCTCTA CTGTCGACAG TTTTGCTGGG AAAGAGGCAT
CTTTTATGCC ATTGTTATCA TTGTAATATT GGGTTCAAGA TCTGTGTTTT AGCTTTCACT GGATTAGTGT TGGCGTTTCG
GA

>Vigan.06G069600.01
ATGGTGTGCA TAAGGAAGGC GACGGTGAAG GATCTTCTGG CGATGCAGGC TTGCAACCTG TTCTGCCTCC CTGAGAACTA
CCAGATGAAG TACTATCTCT ACCATATCCT CTCCTGGCCT CAGCTCCTCT ACGTCGCCGA AGACTACAAC GGTCGCATCG
TCGGCTACGT CCTCGCCAAG ATGGAGGAAG AGACCACCGA CTGCCACGGC CACATCACCT CCCTCGCCGT CCTCCGCACC
CACCGCAAAC TCGGTCTCGC CACCAAACTC ATGACCGCCG CCCAGAACGC CATGGAACAG GTGTTTGGTG CCGAGTATGT
GTCCCTGCAC GTGCGCAAGA GCAACCGTGC GGCCTTCAAT TTGTACACCG AGACCTTGGG GTACAAGATT CATGATGTGG
AGGCTAAGTA TTATGCGGAC GGAGAAGATG CTTATGACAT GAGGAAGGAG CTTAAAGGGA AGCAGCACCA CCATCATCAT
CACCACCATC ACCACCACCA CCATGAGCAT GGTGGTGGGT GTTGTGGTGG GGAGGTCAAG GGAAATGCTA AAGCCAACTG
A

>Vigan.06G069600.01
MVCIRKATVK DLLAMQACNL FCLPENYQMK YYLYHILSWP QLLYVAEDYN GRIVGYVLAK MEEETTDCHG HITSLAVLRT
HRKLGLATKL MTAAQNAMEQ VFGAEYVSLH VRKSNRAAFN LYTETLGYKI HDVEAKYYAD GEDAYDMRKE LKGKQHHHHH
HHHHHHHHEH GGGCCGGEVK GNAKAN*