GBrowse Details

Vigan.06G013100.01

Basic Information:
Name: Vigan.06G013100.01
Multiple alignment
Variant Information
Position: Chr06:1276492..1278884 (- strand)
Length: 2393
Functional Information:
Description: Hypothetical protein.
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.11,0.43,0.53,1.49,30.36,4.87,110.77,16.80
Arabidopsis thaliana homolog: AT2G16385.1
Automatic updates:
Name: NM_001249736 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500603 (LOC100500603), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr06:1276492..1276662 (- strand)
Length: 171
Type: three_prime_UTR
Position: Chr06:1276663..1276803 (- strand)
Length: 141
Type: CDS
Position: Chr06:1278004..1278059 (- strand)
Length: 56
Type: CDS
Position: Chr06:1278662..1278743 (- strand)
Length: 82
Type: CDS
Position: Chr06:1278744..1278884 (- strand)
Length: 141
Type: five_prime_UTR

>Vigan.06G013100.01 class=Sequence position=Chr06:1276492..1278884 (- strand)
CCAACACTTA CTTTCAAAAT TAAACTGTCA ACTTCAGTTT TTCCTTCAAA AGGCTTCCTC TGTGGGGAAT TTATTGTTCC
TTGCAATATA CATAGGAAAC ACCATTTAAC TTCAAACCTA GAAAAATTCA AACTTGCACA AATGGGTACT CTCATGCTTC
TCAAGAACTT CATCCTCCTC TTTCTTCTAA TCTCTGCATC ATTTCTATCA CCATCTTTTG CAGGTGGGTC TTTTTAGGTC
TTGGTTACAG TTTTTAGTAT AAAATAAATC AGGTATAAGA CAGAATCTAT GCATAAGTTC TTCATTCACA CTTATATATA
TATCCTTCAC TCATTATGTT GGAGAGATAT TGCATGCCTA GAATAAATGA TTTTGAGTAG TGCATGTATG AACACACACA
TATATATATA AGAGTTTGTG GGATACATAG AAGTTATTTT GATATTTTTT CTTTTGCCAA GGAAAAAACA CTTATAATAA
CATGTGTATA TAAACATATG AGAAGTTTAA AGCCATAAAT AACAGTGATA TTGTTGAGTT CAGGTTAATT TTGATAGCTG
GAAAGTTAAT CTAATATATA ATGTGTTTGT ATCAGAGTAT GGGGTTTTGA TTATATATAT TTACTTCATT TGCAGCTAAG
TGCATGGCAT GTGATTAACT GAACTTTATT CATTGAAATT TAACTTTTCA TTATTATATG TTATTCTACA TACTGTATAT
TCACACATAC ACATTCATGT AATATGTGCA AAACTATAAG GTCTTAAAAT TGTCTGATGA CATTAACAGA AGTTTTACCT
TGGTCTGTGC TTAATGCATC TGCAGCTAGA CGATCCAAGG ATATCAGGAA CTTCACGAAA GATGTGAATG CAATTCAAGA
GGTATGCATG CCTAACAATG TTTTGATCTT AATCTGTTTA TATATCTTTT CTTATACAGT TTCTGTTCCT ACCACAGTCT
ATAGTTTTAT TAAGCATTTC TGCAATAGGT TATTCACATG TATGAATCAG TTTTCAAGAA CAAAGTGTTT TACCTTTCTG
ATATGCTTCA CCCTTCTTCA AAACCATATG ATAAATTCTG AATAAATATT GGTATCTTCT TGAACATCAT GTTAGTTATT
TACGTATCAA ACAACACTGT CTATTTCTCT CACTGTGAAA CCTTGTGGTT GTACCTAACA AAATGGTGCA GAATTCATGA
ACTACCCATA CCTTCCTATT TGAAACATGT TCTTTGTTAA TTTCTATATA TCTTCTTTTT CTTCTTATTT ATTCAATCCT
TTGTTATTGT TCTTATGTGT GTTGTGTGTG TGGAGTGTAT TAGATGATAG AGAACATAGA AAATGAGAGT AATTAAACAT
GCATATATAA TTAGACACTA CTAATATAAT ATTTTTTTAC AGAAAATTAT TAGTAACATT TCTTAAACAC AATCTCTATT
ACTAGTTGAA TTTAATACAA ATGATCGATT TTGATGGTTT CACTACACAT GCAATGATTT TCACTCTTTT GTAAGTAACT
TTCAATAATT GTAATCAATC ATAAAATATT TGATAGAAAA AGTGTTAACC CTTTCCTTAT TCTATATATA TTATCATTTA
ATCATAATGT GTATATAAAA TTTATATGTT TGGTTATTTC TATACTAATT TTGTTTTTTT TTATTATATC ACTTGCCTTT
TATATAGAGA ATTAGAGTGA ATAATTTGTG GTTTTTATTA TATCACTTGG TTTTTTTTTA TAGATAATTA GAGTGAATAA
TTTGTTTTAT TCTATGTTGT TGAACCTTAA AAATACATTG ATGTTAATAT ATTAAAACAA AATTAATATA TTTTTAAATA
TGAAAAACAC CTAAAAAGTA GAAACCAAAA ATTGAGCAGA AATTCAAATT AGAATAATCA TCTTGAATGT CTTTTTAATA
CTATAATATA CTAAAAAAAT AATTAAAACT AACTATTCAT ACTTTTGACA TTGTGATGAT CAAATTGAGA TTAAGAATGT
ATATTTTTAA AATTTTCATT TCTTGATAAG CCTCCATGTG CATGAACTTT ACACTCAGCC TATGGTTTGT CACTTTGTTA
GGGAACACCA AGGAAGGCAC TGAATAAAGA AGAAGTAAGA AGCATCCATG AGAGGCTTCT TAGGGCTAAC ACAAAAGACT
ATGGAAGATA TGATCCATCA CCATCTCTTT CAAAGCCTCC TTTCAAGCTC ATACCCAATT AACTTAACTC CAATCAATAT
TATGAGAATC TTGGAAGTTG GTGTATTGGC ATAAAGTACC ATAAATAATG TGTTGTTATC TTAATCATGT AACATATAGT
ATGTCATATA GAAAAAGAAA TACGGTTGGA ACCCTAGTAA GTTAGTATCA TAATTATATA TATAATAGAT CTA

>Vigan.06G013100.01
CCAACACTTA CTTTCAAAAT TAAACTGTCA ACTTCAGTTT TTCCTTCAAA AGGCTTCCTC TGTGGGGAAT TTATTGTTCC
TTGCAATATA CATAGGAAAC ACCATTTAAC TTCAAACCTA GAAAAATTCA AACTTGCACA AATGGGTACT CTCATGCTTC
TCAAGAACTT CATCCTCCTC TTTCTTCTAA TCTCTGCATC ATTTCTATCA CCATCTTTTG CAGCTAGACG ATCCAAGGAT
ATCAGGAACT TCACGAAAGA TGTGAATGCA ATTCAAGAGG GAACACCAAG GAAGGCACTG AATAAAGAAG AAGTAAGAAG
CATCCATGAG AGGCTTCTTA GGGCTAACAC AAAAGACTAT GGAAGATATG ATCCATCACC ATCTCTTTCA AAGCCTCCTT
TCAAGCTCAT ACCCAATTAA CTTAACTCCA ATCAATATTA TGAGAATCTT GGAAGTTGGT GTATTGGCAT AAAGTACCAT
AAATAATGTG TTGTTATCTT AATCATGTAA CATATAGTAT GTCATATAGA AAAAGAAATA CGGTTGGAAC CCTAGTAAGT
TAGTATCATA ATTATATATA TAATAGATCT A

>Vigan.06G013100.01
ATGGGTACTC TCATGCTTCT CAAGAACTTC ATCCTCCTCT TTCTTCTAAT CTCTGCATCA TTTCTATCAC CATCTTTTGC
AGCTAGACGA TCCAAGGATA TCAGGAACTT CACGAAAGAT GTGAATGCAA TTCAAGAGGG AACACCAAGG AAGGCACTGA
ATAAAGAAGA AGTAAGAAGC ATCCATGAGA GGCTTCTTAG GGCTAACACA AAAGACTATG GAAGATATGA TCCATCACCA
TCTCTTTCAA AGCCTCCTTT CAAGCTCATA CCCAATTAA

>Vigan.06G013100.01
MGTLMLLKNF ILLFLLISAS FLSPSFAARR SKDIRNFTKD VNAIQEGTPR KALNKEEVRS IHERLLRANT KDYGRYDPSP
SLSKPPFKLI PN*