GBrowse Details

Vigan.05G265800.01

Basic Information:
Name: Vigan.05G265800.01
Multiple alignment
Variant Information
Position: Chr05:34505880..34509468 (+ strand)
Length: 3589
Functional Information:
Description: Similar to N-acetyltransferase 9-like protein-like. [XP_004502183.1, Cicer arietinum]
GO: Molecular Function: N-acetyltransferase activity (GO:0008080)
InterPro: GNAT domain (IPR000182)
Acyl-CoA N-acyltransferase (IPR016181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:12.17,10.37,8.94,7.98,10.24,11.85,4.02,6.41
Arabidopsis thaliana homolog: AT2G04845.1
Automatic updates:
Name: NM_001255891 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max N-acetyltransferase 9-like (LOC100817900), transcript variant 3, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:34505880..34506008 (+ strand)
Length: 129
Type: five_prime_UTR
Position: Chr05:34506009..34506216 (+ strand)
Length: 208
Type: CDS
Position: Chr05:34506311..34506382 (+ strand)
Length: 72
Type: CDS
Position: Chr05:34506458..34506545 (+ strand)
Length: 88
Type: CDS
Position: Chr05:34507443..34507575 (+ strand)
Length: 133
Type: CDS
Position: Chr05:34507839..34507877 (+ strand)
Length: 39
Type: CDS
Position: Chr05:34508981..34509061 (+ strand)
Length: 81
Type: CDS
Position: Chr05:34509062..34509468 (+ strand)
Length: 407
Type: three_prime_UTR

>Vigan.05G265800.01 class=Sequence position=Chr05:34505880..34509468 (+ strand)
GTTGGATTTG AGAGTGGTAA GCGGGTCCCG TGATGGGTCG AATACACGAA ACATTTAAAC AAACACGTGG TGGACAGAGA
AGAAGGTGGC GTAACATAAC TTGTGAGTGA TTTGCGTTGG AGGTTGAGAA TGGATGCGAT GGAAGAGAGT GAGACAGGGA
AAGGGAGTGT GAGCTTAGAG GGAGAGAAGG TGATATTGGT CCCTTACATG GAAGCCCATG TCCCCAAATA TCACCAATGG
ATGAAGGACC CTTCTCTCCT TCAGGCCACT GCCTCCGATC CTCTTACCCT TCAGCAGGAG TACCAAATGC AGCTCTCATG
GTTCCAAGAC CCTTCCAGTT CACCTCTCTC TCTGTCTTGT TCTAACCCTA ACCCTAACTC TATCACTGTC TCTTCATCCT
TTTTCACTGC TCCTCACCTC AATTCTTGCA GAGGAGACCT TCATTGTACT GGACAAGGAC TTGGTTGTTG GACAATTCTC
GCACGGGGAA CCCCACCTCG AAGGTCGCTG CCCTTTTCTG TTTCTATTTA CTCCGATCAC TTTTTTTTTT TTTAAATATA
ACCAAATTTT AACTGCAGCC ATGGTTGGTG ATGTAAATCT GTTCATGAAT GATTTGGATG ATCCTCACGT GGCAGAGGTT
GAAATAATGA TTGCAGAACC AAAGAGGTAT CCCAATTTAA CTTCCGTTTC ATCAACTAGT TTCCCAATTA CTTGCGTATA
CGATTCTGAT ATATATAAAT TGTGTATTGC CTCATTCTAA TTGCAACATG GAGGACACTT GCAGAGCCAG TTGAGATTGT
TTAGTAGTAG CACACTTGCA CTATGTATAA TCCCTGTTCA ATGGCTTAAT AGGTTTCTGC ACAAAAATCC AAGGTGGCAA
GAATAGGAAA GTAGAAAGGA AAGTTACTTG AATATAACCT TTCTAAACTT TTATCTCTTT GTTCATGTGA ACCGGATCTT
TTTGTAAATT TTCATCTCAA GCACGTGAAG AAAAGTTGAA TTTGTTCTGA ATTAATTAAC TGTTTGTGGC TTATGCCCAT
CTTTTTTTAC TGGTGAATTT AGGTGTTCTG TTGCTATTTT GAATGATAAC TCTATTCAAT CATTTTCCAT GTTATGAGCA
GAATATATAA TGTCAGACCA CGAACGTACT TTTTGAAGTT TATATTGTTT TTACTTCCCT ACACTGGGAT CTATGCTCCA
ACTTACTCAC CTTGTTATGC AAGTGCAAGA GATAAAAACC TTTCCTCTGT CTTCATCTAG CAGCCTAAGG TTTTAGGCTG
ATTTAATCTT TTGAAGCTTT GGCATGTCTG GATGAATTTT TTCTATACAC ACTTCTGGGA GAAAAAGGTA AAAGAAAAAA
ATGAAACGAG TTTCTCCATG TGTTCTCTAA ATTTTTATTT TTTAACTTGT GCACAAGTTA ACTTTAAGCT TATGTAGAAA
TTCATTATAT TTTTCCTCCT TTTTCTCTCT CCAAAATGTA TTCATAGAAA AGTTCGTCCA AACAAGTCCT CAGTATTAAA
TCTCTTCATT CTAACCTCTA TCAACTTTCA CTTGCTGGCA TAGCCGTAGG AAGGGACTTG GGAAGGAGTC TGTTCTGATG
ATGATGACCT TTGCTATCGA GAAGTTAGGA ATTAATATGT TTCTGACTAA AATTGCAGAC TCAAATGGAG CATCCCTTGA
CATGTTCAAA AAATTGGTTT GTACGCTGCT TTTTCTTTTT ATCTTTCCTT TTATGTGTCT TACAGCCGAA CATATAACTT
AATTTTGAGT GGTTACGAGA TAATGATGCT TTTGAACAAC AAAATTTTAC TTTTGCTCAA CATATTCTTT AATTTTAGAG
ACATGATCAT TCTATAGATT GATTTCATGC ATTCCCGTGT TAAGTGTCTC TCTCTTTCTC TCTCTCTTCC AAGGTTATTA
AGTTTTGTAG GTTTGACTCA GTTCATGGAT TTTGTGTAGG GGTTTGTGCA AACTTCATAT AGCAACATCT TCAAGGAGGT
GAGAGCCTTT AAATTTCAAT GGATTGCTTG ACTCAGACAA AAACATATGC TTTGTTCTCA CATGATTGAA AGTGCAAGTT
ATTATTTAAA TTTAGCTAAG GAATTTAACT TTTCTTTTCT CAAATAAATT CGGGTTAAAA TCCATATGAT TTGTGCTTAT
TTGGTAGGAG GTTCAAGCTA ATTGATTATT GTAAATTGAC CTCCGGAGTC CTTTAAATCA GTCCTATTCT CGACTATTAT
AGACTTATAG TGATTACCAT GTTTTGAGTT TATTATACAA ATAGAAAGCC AAGAACGAGT ACAACAACAC ACTACAGAGA
TTGAAGCCCT AACAAGTTTT GTTTAGAAGA ACAAAACCAT TCCCAAAGTG ATAATTAACA CATTGTACGC ATAGGAATGT
GTATGCGTTC ATGTACAAAT AATCTAAATT GATATTGGAT ATTTGCATAT TTCTGTACAC TTTTGAACCA ATTTTTCTCT
GATTTGAAAA GTCAAACTTG TTCTACTAAA TTCACTCACA TAGAAATTGC CATAGGTTTC AAATAAAATA GATCATAACT
ATGGTGTAAT CTGAGTCCCA CAAACAGCAA AAGAATTGAT GTGCTATTAG ATTTTCCAGT AATTGGTGGA AACTAGTTTT
CACGTGAATT CATTGTATTT ATGGTGATTT TTGTTTGAAC TTTTGTTGAA TTCCACAGTT TTTATGCACG TGAATTTAAC
AGGATAAATT TAGTGTCTTT AATTATTCAA AACATAAATT ATATCTTAAA ATCGTTTTTT AGTGAAATAT ATCATATATA
TTGTACTTCA TATATTTTAA CCATTTTTTC AGAACATCAT AAATGTTCTG ATAAATAATG AAAACCTTTA GTTTATGTAT
GTCCAGAGCT GTATATTAGA AAGTTATTCC TTTATACCTT ATTCCATTGC TCCAACACTC CTTTCCTACC GTTATGGCCT
ATTTATCTTG GTATCTAGTG CCTTAATCAT GGTTGACTTT TGATAAACTT TGTATACTAT AATGCTTCAC ATTTATGTTC
CACTTTGTCT TTTTCCTTCC TTCTGTAGAA TGTTTAATAA TAGCTCGGTC CTACTTTACA GGTCACTTTG GAGTTACAAG
TAACACAGCC CAAGAAAGAG GAGATGCTTG GTTTAATGAA AATGATAATC AAACATACAT AAAAGTAGCA ATATCACTTC
CAGTTTATTT AATGGTAATA GAATGATATC TTCTGTTGCT ATACTTGTTT TGTGATGTCT GGTTAAAGTG TAACTATACT
AAATTCTGAC ATTATTCATA TAACTCTAAC CCTGTCTAAG TGTAATAATC TGGAGCTATA TTAACGGCGA AGGTATTTAG
CGTGTTTATG TTTTTCTTTT TCTTTTAAAT GAGAAGAACA GACCCGGTGT TTATGTTTTT CTTTTTCTTT TAAATGAGAA
GAACAGACCC GATGCAGACG AGAAAAGGCT TCTGAATTAT TTGATTTTTG GTTTTTTAAA GTATGTTTTA ACTTTAAGTA
TGTTAAGATA GCACAATCTG GAGTGGATGT ATCAGAATAA ACTTCTTAGT CGAGAATAAA AAGTAGGAG

>Vigan.05G265800.01
GTTGGATTTG AGAGTGGTAA GCGGGTCCCG TGATGGGTCG AATACACGAA ACATTTAAAC AAACACGTGG TGGACAGAGA
AGAAGGTGGC GTAACATAAC TTGTGAGTGA TTTGCGTTGG AGGTTGAGAA TGGATGCGAT GGAAGAGAGT GAGACAGGGA
AAGGGAGTGT GAGCTTAGAG GGAGAGAAGG TGATATTGGT CCCTTACATG GAAGCCCATG TCCCCAAATA TCACCAATGG
ATGAAGGACC CTTCTCTCCT TCAGGCCACT GCCTCCGATC CTCTTACCCT TCAGCAGGAG TACCAAATGC AGCTCTCATG
GTTCCAAGAC CCTTCCAAGG AGACCTTCAT TGTACTGGAC AAGGACTTGG TTGTTGGACA ATTCTCGCAC GGGGAACCCC
ACCTCGAAGC CATGGTTGGT GATGTAAATC TGTTCATGAA TGATTTGGAT GATCCTCACG TGGCAGAGGT TGAAATAATG
ATTGCAGAAC CAAAGAGCCG TAGGAAGGGA CTTGGGAAGG AGTCTGTTCT GATGATGATG ACCTTTGCTA TCGAGAAGTT
AGGAATTAAT ATGTTTCTGA CTAAAATTGC AGACTCAAAT GGAGCATCCC TTGACATGTT CAAAAAATTG GGGTTTGTGC
AAACTTCATA TAGCAACATC TTCAAGGAGG TCACTTTGGA GTTACAAGTA ACACAGCCCA AGAAAGAGGA GATGCTTGGT
TTAATGAAAA TGATAATCAA ACATACATAA AAGTAGCAAT ATCACTTCCA GTTTATTTAA TGGTAATAGA ATGATATCTT
CTGTTGCTAT ACTTGTTTTG TGATGTCTGG TTAAAGTGTA ACTATACTAA ATTCTGACAT TATTCATATA ACTCTAACCC
TGTCTAAGTG TAATAATCTG GAGCTATATT AACGGCGAAG GTATTTAGCG TGTTTATGTT TTTCTTTTTC TTTTAAATGA
GAAGAACAGA CCCGGTGTTT ATGTTTTTCT TTTTCTTTTA AATGAGAAGA ACAGACCCGA TGCAGACGAG AAAAGGCTTC
TGAATTATTT GATTTTTGGT TTTTTAAAGT ATGTTTTAAC TTTAAGTATG TTAAGATAGC ACAATCTGGA GTGGATGTAT
CAGAATAAAC TTCTTAGTCG AGAATAAAAA GTAGGAG

>Vigan.05G265800.01
ATGGATGCGA TGGAAGAGAG TGAGACAGGG AAAGGGAGTG TGAGCTTAGA GGGAGAGAAG GTGATATTGG TCCCTTACAT
GGAAGCCCAT GTCCCCAAAT ATCACCAATG GATGAAGGAC CCTTCTCTCC TTCAGGCCAC TGCCTCCGAT CCTCTTACCC
TTCAGCAGGA GTACCAAATG CAGCTCTCAT GGTTCCAAGA CCCTTCCAAG GAGACCTTCA TTGTACTGGA CAAGGACTTG
GTTGTTGGAC AATTCTCGCA CGGGGAACCC CACCTCGAAG CCATGGTTGG TGATGTAAAT CTGTTCATGA ATGATTTGGA
TGATCCTCAC GTGGCAGAGG TTGAAATAAT GATTGCAGAA CCAAAGAGCC GTAGGAAGGG ACTTGGGAAG GAGTCTGTTC
TGATGATGAT GACCTTTGCT ATCGAGAAGT TAGGAATTAA TATGTTTCTG ACTAAAATTG CAGACTCAAA TGGAGCATCC
CTTGACATGT TCAAAAAATT GGGGTTTGTG CAAACTTCAT ATAGCAACAT CTTCAAGGAG GTCACTTTGG AGTTACAAGT
AACACAGCCC AAGAAAGAGG AGATGCTTGG TTTAATGAAA ATGATAATCA AACATACATA A

>Vigan.05G265800.01
MDAMEESETG KGSVSLEGEK VILVPYMEAH VPKYHQWMKD PSLLQATASD PLTLQQEYQM QLSWFQDPSK ETFIVLDKDL
VVGQFSHGEP HLEAMVGDVN LFMNDLDDPH VAEVEIMIAE PKSRRKGLGK ESVLMMMTFA IEKLGINMFL TKIADSNGAS
LDMFKKLGFV QTSYSNIFKE VTLELQVTQP KKEEMLGLMK MIIKHT*