GBrowse Details

Vigan.05G218500.01

Basic Information:
Name: Vigan.05G218500.01
Multiple alignment
Variant Information
Position: Chr05:22115050..22117967 (- strand)
Length: 2918
Functional Information:
Description: Similar to Uncharacterized protein. [I1KY75, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: protein repair (GO:0030091)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peptide-methionine (S)-S-oxide reductase activity (GO:0008113)
Molecular Function: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (GO:0016671)
InterPro: Peptide methionine sulphoxide reductase MsrA (IPR002569)
Peptide methionine sulfoxide reductase (IPR028427)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:45.73,13.58,10.20,14.91,9.18,13.02,14.00,8.72
Automatic updates:
Name: NM_001254207 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peptide methionine sulfoxide reductase-like (LOC100792997), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:22115050..22115437 (- strand)
Length: 388
Type: three_prime_UTR
Position: Chr05:22115438..22115689 (- strand)
Length: 252
Type: CDS
Position: Chr05:22116521..22116880 (- strand)
Length: 360
Type: CDS
Position: Chr05:22116881..22117967 (- strand)
Length: 1087
Type: five_prime_UTR

>Vigan.05G218500.01 class=Sequence position=Chr05:22115050..22117967 (- strand)
AAAATTTAGA CTGATTTTGC AACAATTAGT AATTGCTATA TGAAATTTTG CTGCTTAGAG TCTCCATTTT TGTTTGACTG
GCTTATGAAT TTTAAATGGC TGGTTGGAGG ATTGTTTATG GTTTTATCGT ATTCTGCAAT CATTAGTGGT GATTAACCAT
TTTAGTGTGG ACACATGGTC TACTTTCTTT TGTCAGAGAA TTGAGTGTTT TTAGATTTTA AATTTGGTTC AATGCAAAGA
CATTTCTTCA CCAACATTGC AGTAATTTAG GTTTCTCTTT TCATTTGCAG TAAAAGCTTT TTAATAGATT TCTGATAGGT
CCACGATAAT GTGTATACTA GAGTTGGCTA AAAGGGAGTG CGATAAAAAG GTGATGATGG ACAGAACGTG TGAAGTGAGA
ATCAAAATGG GAGAAAATAG GCAAATAACT CACACAGAGA ACTTGCCAAG GGAGGAGTTA GATGGAAAAT GATGGGGGAA
ATGGTAGCAA CAGGGACAGC TGTCACATGC TCAGTGGGGA AGGAAATTTG GGGAGAAAGG GAAATTGGTT GTTCTGTTCT
CTGCAGAATA TTCATTGTTA TTGTTGGAAA TATGAACAAA CTCTGCTTTT AGTAATTAAT GTAGGGATTT ATTATGTAGG
CATATCATAT TATATGAACA AAAGTTAGAC AGACAGTCCA GCATCTTATG CCTGTTTTCT CTCTTTCAAT AGTTGTTTCT
TGTGTGTTCT TCTATGTTGA GAGAAAATTT CTTATATTGT AAGGAGCTTG ACATCACTAT TTTGTATGGT CATGTATTGT
GAACTTATCA ATCAGTACAC TGGAGTAAAA CTAAGTTCTT GTTTTTAGGC CTTCGGTTAT TTGTTTAAAT TTGTCAATCT
TGTAGAGAAG TGTGCTTATT CTATTCAAAC TCCTTGCAGC CATAAGAAGC ATCATATTTG CTCAATCAGT TCCCTTCTGT
GTTACTTTCT TCTGCTCTCT CCAGCCTTTT CAAAACGAAG CTCCTTCCAT CACTCTCAGG TTTTTCTGTC AAGTATTGTT
GCTGCTTCTG CAAAACTCAT CCAAATATTG CTGGTAACAA GTCCTCCATG AACCTGTTGA GTAGACTCGT CGGGTTGGGT
AGCCCAAGGG CAGCAGAAAA CATTAATTCA GCAGCTGCCC AAGGACCGGA TGATGACATA CCCGAACCAG GTCAACAGTT
TGCCCAGTTT GGTGCTGGTT GCTTTTGGGG TGTTGAGCTG GCCTTCCAGA GAGCAGTGGG GGTGACCAAG ACAGAAGTTG
GTTATAGCCA AGGGCTGCTG CATAATCCAA GCTATGAGGA TGTGTGTACA GGGACCACAC ACCACTCAGA GGTTGTCAGG
GTCCAATACG ATCCCAATCA ATGTAGCTAT GAGAGTTTGC TTGGTTTGTT CTGGGCTAGA CATGATCCTA CTGCACTGAA
TCGGCAGGTA AATTTTTATT TTTTAGTTGT TACAAACGCA GTCATGCTTA ATTGAATGTA TTGGTCTGGT TTGTTATAAG
TACCATGTTC TTACTGTTTA CTAGTCTACA AGTTTGTTAT ATAGTGATCT ATGTAAACTC TCGACTGATA ACCTTGGCTT
CAAGTTTGAT GTCTACGCTT TCCTGATCTG AATTACAAGT TTGGGCTTGA GGATTATTTA TGTAAAGTTT CTTTAGAATT
ATTCACCAAC TCTTTACTTA AAATAGTTCA TCGTTTTGCT ATACTTTATT TTTGCATCGT GATACATGGT CTAGGGTGAT
GCTAATTTCT GTTGCCTAAT GCATGCACTT ATGTTTGAAC ATCCTGTGTT GTCTTGTTTT GTGATTTCTG TTTCCAATAT
GTTATCATAT GTATTGGGTT ATATCAAATT GATGGGGGAA TCTCCTTGAA GTTTGTTTCT TTCATTACTA ATTATTAAGC
TCTTTGCCAT GCCAAGTGTG GGATTTTTTA CCCTGCCGTT TGTTTCCTTC ATCACTCATT CCAGTTTTAC TTACCATTAC
ACCATACATA TGTATATGTG ACTTCACAGT TCACAAGTTA TTACTATAGT TCTCACTCAG TTACGTTTTG GGAGTTCATT
GCAAATACTT ATTTTTACAT GCTTCTGATG AAACCGTTTT TTTCTTTTCA GCACTGCAAT TTTTCTCATT CTCTTCATCA
TTCAAATGCA TGCACTTATG AACTTTGAAT GTGTTGACAA CTTGTGATCT GTAGTGCTGC TGCAGCTGCA TCATGTGGCT
GAAGTACTAA GTAACAGTTT GTTCTTCCTA TGTGGCAGGG TAATGATGTG GGAACACAAT ACAGGTCTGG AATATACTTT
TACACACCTG AACAAGAGAA GGCAGCCACA GAGTCCTTGG AACAGCAACA GCAGAAGCTG AACAGGAAGA TTGTTACTGA
GATTCTTCCT GCCAAGAAGT TCTACAGGGC AGAAGAATAC CATCAACAGT ACCTCGAGAA AGGAGGCAGA TTTGGTTCCA
AGCAATCTGC TTCAAAGGGA TGCAACGATC CAATCCGATG CTATGGTTAG GTTATTCATA TGGGAATTGC ATCGAAGGTT
CTAAATGACA TTTAGATGAT TAAAGCATGC TTTTGTTGGA AAGTATTTTA TCTATAAAGC CAAGTCACAC TCTATCTCCC
TTCTGTATTG TATTTATAGG GTGAAGATCA CTATAGAACT AGAATCACTT TTTAGAGTTA TGTAGTTTAT ATGTATAGTT
TTCTAATAAA CTGGTCTTAT AGTATGCCTT TAATTAGTGT CACTTCTTGA TTTAAAATGT CATTTTGTTT TGGGGTTTTC
ACCCTATATT TATGTGGATA ATTACTCAAA ACAATGTTAT ATGAACTGGA GGAGTAATGA ACTTGTCATG GTGTGCTATA
TTGAATTCAA GATTTATGTG AAAAGGATTT AAGAGGGG

>Vigan.05G218500.01
AAAATTTAGA CTGATTTTGC AACAATTAGT AATTGCTATA TGAAATTTTG CTGCTTAGAG TCTCCATTTT TGTTTGACTG
GCTTATGAAT TTTAAATGGC TGGTTGGAGG ATTGTTTATG GTTTTATCGT ATTCTGCAAT CATTAGTGGT GATTAACCAT
TTTAGTGTGG ACACATGGTC TACTTTCTTT TGTCAGAGAA TTGAGTGTTT TTAGATTTTA AATTTGGTTC AATGCAAAGA
CATTTCTTCA CCAACATTGC AGTAATTTAG GTTTCTCTTT TCATTTGCAG TAAAAGCTTT TTAATAGATT TCTGATAGGT
CCACGATAAT GTGTATACTA GAGTTGGCTA AAAGGGAGTG CGATAAAAAG GTGATGATGG ACAGAACGTG TGAAGTGAGA
ATCAAAATGG GAGAAAATAG GCAAATAACT CACACAGAGA ACTTGCCAAG GGAGGAGTTA GATGGAAAAT GATGGGGGAA
ATGGTAGCAA CAGGGACAGC TGTCACATGC TCAGTGGGGA AGGAAATTTG GGGAGAAAGG GAAATTGGTT GTTCTGTTCT
CTGCAGAATA TTCATTGTTA TTGTTGGAAA TATGAACAAA CTCTGCTTTT AGTAATTAAT GTAGGGATTT ATTATGTAGG
CATATCATAT TATATGAACA AAAGTTAGAC AGACAGTCCA GCATCTTATG CCTGTTTTCT CTCTTTCAAT AGTTGTTTCT
TGTGTGTTCT TCTATGTTGA GAGAAAATTT CTTATATTGT AAGGAGCTTG ACATCACTAT TTTGTATGGT CATGTATTGT
GAACTTATCA ATCAGTACAC TGGAGTAAAA CTAAGTTCTT GTTTTTAGGC CTTCGGTTAT TTGTTTAAAT TTGTCAATCT
TGTAGAGAAG TGTGCTTATT CTATTCAAAC TCCTTGCAGC CATAAGAAGC ATCATATTTG CTCAATCAGT TCCCTTCTGT
GTTACTTTCT TCTGCTCTCT CCAGCCTTTT CAAAACGAAG CTCCTTCCAT CACTCTCAGG TTTTTCTGTC AAGTATTGTT
GCTGCTTCTG CAAAACTCAT CCAAATATTG CTGGTAACAA GTCCTCCATG AACCTGTTGA GTAGACTCGT CGGGTTGGGT
AGCCCAAGGG CAGCAGAAAA CATTAATTCA GCAGCTGCCC AAGGACCGGA TGATGACATA CCCGAACCAG GTCAACAGTT
TGCCCAGTTT GGTGCTGGTT GCTTTTGGGG TGTTGAGCTG GCCTTCCAGA GAGCAGTGGG GGTGACCAAG ACAGAAGTTG
GTTATAGCCA AGGGCTGCTG CATAATCCAA GCTATGAGGA TGTGTGTACA GGGACCACAC ACCACTCAGA GGTTGTCAGG
GTCCAATACG ATCCCAATCA ATGTAGCTAT GAGAGTTTGC TTGGTTTGTT CTGGGCTAGA CATGATCCTA CTGCACTGAA
TCGGCAGGGT AATGATGTGG GAACACAATA CAGGTCTGGA ATATACTTTT ACACACCTGA ACAAGAGAAG GCAGCCACAG
AGTCCTTGGA ACAGCAACAG CAGAAGCTGA ACAGGAAGAT TGTTACTGAG ATTCTTCCTG CCAAGAAGTT CTACAGGGCA
GAAGAATACC ATCAACAGTA CCTCGAGAAA GGAGGCAGAT TTGGTTCCAA GCAATCTGCT TCAAAGGGAT GCAACGATCC
AATCCGATGC TATGGTTAGG TTATTCATAT GGGAATTGCA TCGAAGGTTC TAAATGACAT TTAGATGATT AAAGCATGCT
TTTGTTGGAA AGTATTTTAT CTATAAAGCC AAGTCACACT CTATCTCCCT TCTGTATTGT ATTTATAGGG TGAAGATCAC
TATAGAACTA GAATCACTTT TTAGAGTTAT GTAGTTTATA TGTATAGTTT TCTAATAAAC TGGTCTTATA GTATGCCTTT
AATTAGTGTC ACTTCTTGAT TTAAAATGTC ATTTTGTTTT GGGGTTTTCA CCCTATATTT ATGTGGATAA TTACTCAAAA
CAATGTTATA TGAACTGGAG GAGTAATGAA CTTGTCATGG TGTGCTATAT TGAATTCAAG ATTTATGTGA AAAGGATTTA
AGAGGGG

>Vigan.05G218500.01
ATGAACCTGT TGAGTAGACT CGTCGGGTTG GGTAGCCCAA GGGCAGCAGA AAACATTAAT TCAGCAGCTG CCCAAGGACC
GGATGATGAC ATACCCGAAC CAGGTCAACA GTTTGCCCAG TTTGGTGCTG GTTGCTTTTG GGGTGTTGAG CTGGCCTTCC
AGAGAGCAGT GGGGGTGACC AAGACAGAAG TTGGTTATAG CCAAGGGCTG CTGCATAATC CAAGCTATGA GGATGTGTGT
ACAGGGACCA CACACCACTC AGAGGTTGTC AGGGTCCAAT ACGATCCCAA TCAATGTAGC TATGAGAGTT TGCTTGGTTT
GTTCTGGGCT AGACATGATC CTACTGCACT GAATCGGCAG GGTAATGATG TGGGAACACA ATACAGGTCT GGAATATACT
TTTACACACC TGAACAAGAG AAGGCAGCCA CAGAGTCCTT GGAACAGCAA CAGCAGAAGC TGAACAGGAA GATTGTTACT
GAGATTCTTC CTGCCAAGAA GTTCTACAGG GCAGAAGAAT ACCATCAACA GTACCTCGAG AAAGGAGGCA GATTTGGTTC
CAAGCAATCT GCTTCAAAGG GATGCAACGA TCCAATCCGA TGCTATGGTT AG

>Vigan.05G218500.01
MNLLSRLVGL GSPRAAENIN SAAAQGPDDD IPEPGQQFAQ FGAGCFWGVE LAFQRAVGVT KTEVGYSQGL LHNPSYEDVC
TGTTHHSEVV RVQYDPNQCS YESLLGLFWA RHDPTALNRQ GNDVGTQYRS GIYFYTPEQE KAATESLEQQ QQKLNRKIVT
EILPAKKFYR AEEYHQQYLE KGGRFGSKQS ASKGCNDPIR CYG*