GBrowse Details

Vigan.05G172700.01

Basic Information:
Name: Vigan.05G172700.01
Multiple alignment
Variant Information
Position: Chr05:14680259..14683225 (+ strand)
Length: 2967
Functional Information:
Description: Similar to TP53-regulating kinase-like isoform X2. [XP_004500334.1, Cicer arietinum]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: protein tyrosine kinase activity (GO:0004713)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Tyrosine-protein kinase, active site (IPR008266)
Protein kinase-like domain (IPR011009)
Serine/threonine-protein kinase Bud32 (IPR022495)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:10.83,21.08,12.28,25.93,12.39,13.85,18.03,11.25
Automatic updates:
Name: NM_001252913 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max TP53-regulating kinase-like (LOC100782376), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001253085 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max TP53-regulating kinase-like (LOC100813383), mRNA.
PubMed ID: 21667246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr05:14680259..14680561 (+ strand)
Length: 303
Type: five_prime_UTR
Position: Chr05:14680562..14680624 (+ strand)
Length: 63
Type: CDS
Position: Chr05:14681435..14681548 (+ strand)
Length: 114
Type: CDS
Position: Chr05:14681661..14681939 (+ strand)
Length: 279
Type: CDS
Position: Chr05:14682050..14682163 (+ strand)
Length: 114
Type: CDS
Position: Chr05:14682825..14682897 (+ strand)
Length: 73
Type: CDS
Position: Chr05:14682986..14683023 (+ strand)
Length: 38
Type: CDS
Position: Chr05:14683024..14683225 (+ strand)
Length: 202
Type: three_prime_UTR

>Vigan.05G172700.01 class=Sequence position=Chr05:14680259..14683225 (+ strand)
CCTGAACTTG TGGTGGCTGC AATTAACTTC TTCTTTCAAT TGATGCCAAT TACTGCATGA TATCATTGCA ATTGTTGTTT
ACTATATTCC GTTAACTTCT CGATTAATTG TATTCGAAAT TACTAGATTT ACTCAATTCC AATTCATACT AGAATCAATA
TCTACAGTTA CATGTTTTTT TTTTCTTTTG TCTTCTTTAT TTTTCCGCTG TGTAATCTTT TTTCCCTTTT CGTTTTTGAG
CAGATAGTTG TTGCTGAAGA GAGTTGAAAA CACCAGGAAT TTCACTGCTT AAGAGTTGAA TATATGGAGA CTGAAGCTGA
CTCAAGAGAT ACTTCACTCA TTCTGCTCAA ACAAGGAGCT GAGGCTGTAA GTGTAATCAC ATCCTGGATT TGTAGAATTA
ATTAACACCT AGCCTTGATG TAAAATTTCT ATCTTTTCTT GTTTTTTTAC TGGTGCACTC ACCTTGTATG TACAATCACT
CCATTGTATT GTTTGGTAGC AATTGATTTC TGGTTTTCTG CCCTTTGAGG GTGTAAAGTT TTAATTTTAG AGGAAATTGG
TAACAATTGG TAGCAAGAAG GACCCGGATG AATTAATTCC CTGAGAATGA AGTTTTTGAT AGATAAAAGT AGCCTCACCG
AAAACATCCT AAAGGTACTC TCGTTATTTC TGCATTGAAC CAAATATAGC TGGTAGGTTA TATAACTCTC CAGTTTAGAC
TAAACACTAC AACACATTCA TGCATTCACC AAGAAGGCCA TCCAAGTGAA GAGCTAAGAG AAAAAAAAAA TTATATGCCT
TCTTCCACGG TTATATCCTC ACAGGTCAGA GAAAGTTTCA TTTTTCTCTT TCCAGTTGTT TGGTTCAGTG GAAAAATAAT
GAGAGTACCT TTTGATATGT TGTTAATGAG GTTACTTTGT TCTTCATAGT ATGAGGTGGG ATGTTGTTGG TGAGGATACT
ATGGAATGCT CTTCCTCTAA AAGTTTCAAT TCAAGCTTAG AGGAAATTCC TAGCAATTGA CTCCATCAGC ATTGTGAGAT
CCATATAGTT AATCTTACCC AGTAGGATAA GGTTTTTATT TGTTGTTGGG GTAGTTCTTC AACCCACTGC TTTGGATGAT
TCTTTTTTGT GAAATAGCAC TGACTAAATT ATGGCCTTTT GCGTTCCTTT TTGTAGAGGG TTTTTGAGTC TTCTTTTGTG
GGAAGGAAAT CCGTTGTCAA GGAACGCTTC TCAAAGAAGT ACAGGCATCC AGCTTTGGAT TCAAAATTGA CCCTCAAGCG
CTTAAATGCG GTTAGATTTA GACAATTTGT GTTATTTGTT TTACACTGAA GCTCTGTATA TTAAGCTGTG CATTGTTTTA
TTTCTTGAAT GTTTTATTTC ACCAATTGAT TTTTTTGAGC AGGAGGCTAG GTGCATGACC AAAGCAAGGC GACTTGGTGT
TTGTACTCCT GTGCTGTATG CTGTGGATCA CGTGTTGCAC ACTTTAACAT TTGAATATGT TACTGGCTCT TCAGTCAAAG
ATGTGTTCCT TGAAATCGGG TCACGTGGGA CTGATAAAGA GTGGCTGGAC AATATAGCAT CCCAAATTGG TGAAGCAATT
GGGAAGTTAC ATGATGGTGG TCTTATTCAT GGTGATTTAA CAACATCAAA CATGTTGTTG AAGAGTGATA CCAAGCAGTT
GGTGAGTCCA TTCATGTCTT AGGTCCTGTA ATATCCAATT ACCCATTAAT GCTATGCAAT ATGAAAAATA TTGTCAATGG
TTGTTACAGA ATTCAAGTGT ATTTTACATA GGTTCTTATT GATTTTGGTT TGAGCTTCAC TTCAACTCTT CCAGAAGATA
AAGCTGTTGA TTTGTATGTT CTGGAAAGAT CTTTTATCTC AATGCATTCA TCATGTGGGA ATGTGGTAAG CCAACTTTTC
GTTTCCCCTT AACTGTGATG CCATAGAAAA TAGAAAATTA AGGAGATGAA GACGGTTTTA TTTTTCAGTT CTAAGAATTT
GAATTAGAGG GGCACTCCAC ATAGTTAGTG CTAAAAGTAG CATAAAACAT AATTTGGGGT ACGTTATACT AAAAATCTTC
TGTTGAAACT AGCTTTAGTA CACCTAGATT AAAGCGTTAC AATTTACATC TTAATTTTCA TAAACATGCT CTTGTGTTAA
TACTTAATTA AAGCTGTCAA TGTGAGAGGT CTGCCATGCT TGTGATAAGT TTTTTGCCCA ATTTCCTATT CCTGTTTTCA
ACTGTTTACA ATCAGGACTT TCTAGTGTAT GCACTAAAGT TGATTTGGGC AATGTTTGTG CTAAAGAAAC AAAGCATTGA
ATAGGATGAA CTCTTTATCT CACAAATGAA CTTCTCATTG ACCAACAATA GCACTTCCTT TTGTGTCAAA GAAGCTGAGA
TTTACTTCAC CACCCTATGG ATCCATGTCA TCTAACTTCA CATTCCGCAA ACAGAAACCG AAGCCTTTTT CTATAATATG
TTTTCTGCTT AGTCAAACAG AAGGTATGAT TATAAACAAG AAATCAATTG ACTAACAATT TTGAACATTG GATTTTGTCT
GAACAGATGG ATCAAATTCT TGCTGCATAC AGGAAGTCGT CAAAACAGTG GTCATCCACA TTAAACAAGC TAGCACAAGG
TTATACCCTC CCTCTTCTAC TTTCTTCAAC TTTTACACTT TTTCTTCAAT ACATGCTTCT TACTTCCATA ATTTTCACAA
CTTGCAGTGC GACAAAGAGG GCGGAAGAGG ACCATGGTTG GATGAATCTG TCTCAAATTT CGTTTCTTTA TTGAGATATA
AAAAACGACA ACTAAGGATG TTATTAATGT AGTTTATCTT CACATTCTCT CTCTATTTGT ATTTTTGTAG TGTGCTTATC
TTCTACAGTT TATAAAAAAT GTGATGCCGT ATAAACTTGT GGTTGCCATT TAATCTACAT AAAATAGTTT TTTTTTTTTG
TTGCATG

>Vigan.05G172700.01
CCTGAACTTG TGGTGGCTGC AATTAACTTC TTCTTTCAAT TGATGCCAAT TACTGCATGA TATCATTGCA ATTGTTGTTT
ACTATATTCC GTTAACTTCT CGATTAATTG TATTCGAAAT TACTAGATTT ACTCAATTCC AATTCATACT AGAATCAATA
TCTACAGTTA CATGTTTTTT TTTTCTTTTG TCTTCTTTAT TTTTCCGCTG TGTAATCTTT TTTCCCTTTT CGTTTTTGAG
CAGATAGTTG TTGCTGAAGA GAGTTGAAAA CACCAGGAAT TTCACTGCTT AAGAGTTGAA TATATGGAGA CTGAAGCTGA
CTCAAGAGAT ACTTCACTCA TTCTGCTCAA ACAAGGAGCT GAGGCTAGGG TTTTTGAGTC TTCTTTTGTG GGAAGGAAAT
CCGTTGTCAA GGAACGCTTC TCAAAGAAGT ACAGGCATCC AGCTTTGGAT TCAAAATTGA CCCTCAAGCG CTTAAATGCG
GAGGCTAGGT GCATGACCAA AGCAAGGCGA CTTGGTGTTT GTACTCCTGT GCTGTATGCT GTGGATCACG TGTTGCACAC
TTTAACATTT GAATATGTTA CTGGCTCTTC AGTCAAAGAT GTGTTCCTTG AAATCGGGTC ACGTGGGACT GATAAAGAGT
GGCTGGACAA TATAGCATCC CAAATTGGTG AAGCAATTGG GAAGTTACAT GATGGTGGTC TTATTCATGG TGATTTAACA
ACATCAAACA TGTTGTTGAA GAGTGATACC AAGCAGTTGG TTCTTATTGA TTTTGGTTTG AGCTTCACTT CAACTCTTCC
AGAAGATAAA GCTGTTGATT TGTATGTTCT GGAAAGATCT TTTATCTCAA TGCATTCATC ATGTGGGAAT GTGATGGATC
AAATTCTTGC TGCATACAGG AAGTCGTCAA AACAGTGGTC ATCCACATTA AACAAGCTAG CACAAGTGCG ACAAAGAGGG
CGGAAGAGGA CCATGGTTGG ATGAATCTGT CTCAAATTTC GTTTCTTTAT TGAGATATAA AAAACGACAA CTAAGGATGT
TATTAATGTA GTTTATCTTC ACATTCTCTC TCTATTTGTA TTTTTGTAGT GTGCTTATCT TCTACAGTTT ATAAAAAATG
TGATGCCGTA TAAACTTGTG GTTGCCATTT AATCTACATA AAATAGTTTT TTTTTTTTGT TGCATG

>Vigan.05G172700.01
ATGGAGACTG AAGCTGACTC AAGAGATACT TCACTCATTC TGCTCAAACA AGGAGCTGAG GCTAGGGTTT TTGAGTCTTC
TTTTGTGGGA AGGAAATCCG TTGTCAAGGA ACGCTTCTCA AAGAAGTACA GGCATCCAGC TTTGGATTCA AAATTGACCC
TCAAGCGCTT AAATGCGGAG GCTAGGTGCA TGACCAAAGC AAGGCGACTT GGTGTTTGTA CTCCTGTGCT GTATGCTGTG
GATCACGTGT TGCACACTTT AACATTTGAA TATGTTACTG GCTCTTCAGT CAAAGATGTG TTCCTTGAAA TCGGGTCACG
TGGGACTGAT AAAGAGTGGC TGGACAATAT AGCATCCCAA ATTGGTGAAG CAATTGGGAA GTTACATGAT GGTGGTCTTA
TTCATGGTGA TTTAACAACA TCAAACATGT TGTTGAAGAG TGATACCAAG CAGTTGGTTC TTATTGATTT TGGTTTGAGC
TTCACTTCAA CTCTTCCAGA AGATAAAGCT GTTGATTTGT ATGTTCTGGA AAGATCTTTT ATCTCAATGC ATTCATCATG
TGGGAATGTG ATGGATCAAA TTCTTGCTGC ATACAGGAAG TCGTCAAAAC AGTGGTCATC CACATTAAAC AAGCTAGCAC
AAGTGCGACA AAGAGGGCGG AAGAGGACCA TGGTTGGATG A

>Vigan.05G172700.01
METEADSRDT SLILLKQGAE ARVFESSFVG RKSVVKERFS KKYRHPALDS KLTLKRLNAE ARCMTKARRL GVCTPVLYAV
DHVLHTLTFE YVTGSSVKDV FLEIGSRGTD KEWLDNIASQ IGEAIGKLHD GGLIHGDLTT SNMLLKSDTK QLVLIDFGLS
FTSTLPEDKA VDLYVLERSF ISMHSSCGNV MDQILAAYRK SSKQWSSTLN KLAQVRQRGR KRTMVG*