GBrowse Details

Vigan.05G157100.01

Basic Information:
Name: Vigan.05G157100.01
Multiple alignment
Variant Information
Position: Chr05:12911913..12913326 (+ strand)
Length: 1414
Functional Information:
Description: Similar to Uncharacterized protein. [I1LM81, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal (IPR004046)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.37,3.91,0.04,0.08,0.00,0.39,0.12
Arabidopsis thaliana homolog: AT3G03190.1
Automatic updates:
Name: KM818402 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phi class glutathione S-transferase (GSTF8) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: KM818404 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phi class glutathione S-transferase (GSTF11) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001254482 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase F11-like (LOC100812502), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001317546 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase F11-like (LOC100796010), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:12911913..12911968 (+ strand)
Length: 56
Type: five_prime_UTR
Position: Chr05:12911969..12912115 (+ strand)
Length: 147
Type: CDS
Position: Chr05:12912461..12912509 (+ strand)
Length: 49
Type: CDS
Position: Chr05:12912706..12913151 (+ strand)
Length: 446
Type: CDS
Position: Chr05:12913152..12913326 (+ strand)
Length: 175
Type: three_prime_UTR

>Vigan.05G157100.01 class=Sequence position=Chr05:12911913..12913326 (+ strand)
AGTGGCGGCA TCAAATAATT AAAGATTGAG TGTGTTTGAG TATAGAAATT TGAACTATGG TGGTGAAGGT GTATGGTGAT
GTAAGGGCAG CATGCCCTCA AAGAGTGATG CTGTGCCTCT TGGAGAAAGG AGTAGACTTT GAACTTGTGC CTATTGATCT
TCAACAGGGA CAACATAAGA CACCTCAATT CCTTCTCCTA CAGGTCCACT CATACAATTT TTTCACATAC TTTTAATTTT
AAGATCATAA TTTTGTGGCT TCATTTTGAT GAAGAAACAA ATAATGACCA TCTATAAAAT TAACAGATGA CTTTCATCAA
TATATTTTAT TTATTTATTT TGGTAATAAA TAGATTAAAT AAATTTATGT ATGGATGAAA TTGGACAGTG GGTGAAGAAA
TCACTGTCGC CTTTATTTGG ATAATCCAAA TTTTAATGTA GTGAATTTTA TAAATACAAA GTTAATCCAA TCAAACCTGA
CTATATTTTG AGATAATGTT TAGGGTTTAG TTTATGTGTA ATTATATGTG TAAGGATATT TGTTGCAGCC CTTTGGTCAA
GTTCCAGTTG TGGAAGACGG TGATTTCAGG CTCTTTGGTA AGAATTCAAT CAAATACTTT GGGTTAAACC TTTTATGTTA
TTCCTTTTTT AATGATCTTC CAGAAAAATA TTACTTAAAT ACTTCACATC TATTGCATAC AAGTTGTAAC ACATTGTGTA
CAAAAATTGT GTTACCTATC ACATATACAG TGCTATCCAA CGCAACCTGG TTTTTGTTGT GTTGTTTATG CAGAATCAAG
AGCTATTATA AGGTACTACG CAACAAAATA TGCAGATCGT GGTAGTGAGC TAATGGGTAA AACCTTAGAG GAAAGGGCTT
TGGTGGAGCA GTGGCTAGAA GTAGAAGCAC ACAACTTTAA TAATTTATGC TTCACTATAA TGTTTCAGCG TGTGATCCTA
CCAAGGATGG GTAAGGTTGG GAACTTGGCC TTGGCAGACA TAAGTGAGAA AGATTTAGTG AAGGTCCTTG ATGTGTATGA
AAGTAGGCTC TCTCAAAGCT CATACCTTGC AGGAGATTTT TTCTCTTTGG CTGATCTCAG CCACCTTCCA GGGCTTGGAC
ATCTTATTGA GGAAGCCAAA CTTGGCCACT TGGTAACTGA GAGGAAGAAT GTCTATGCAT GGTGGCAGAA AATTTCAAAC
AGGCCAGCTT GGAAGAAGTT AAAAGATCTG GCTCACTGAT TTAAACAGCA GTTAGTTTAT TATATAACTT ACGACTATCT
CATTACCATC AATTTTTACT TGGCACTTTA TTATACAAAT AATGTGTTGT AAAAATTCTT GAGAGAATAA GTTCGTCATT
AGTAAGTTTG TCTTATCATG AAAGATTGAT TCTGTTTAAA AATTTCTTTT GTAA

>Vigan.05G157100.01
AGTGGCGGCA TCAAATAATT AAAGATTGAG TGTGTTTGAG TATAGAAATT TGAACTATGG TGGTGAAGGT GTATGGTGAT
GTAAGGGCAG CATGCCCTCA AAGAGTGATG CTGTGCCTCT TGGAGAAAGG AGTAGACTTT GAACTTGTGC CTATTGATCT
TCAACAGGGA CAACATAAGA CACCTCAATT CCTTCTCCTA CAGCCCTTTG GTCAAGTTCC AGTTGTGGAA GACGGTGATT
TCAGGCTCTT TGAATCAAGA GCTATTATAA GGTACTACGC AACAAAATAT GCAGATCGTG GTAGTGAGCT AATGGGTAAA
ACCTTAGAGG AAAGGGCTTT GGTGGAGCAG TGGCTAGAAG TAGAAGCACA CAACTTTAAT AATTTATGCT TCACTATAAT
GTTTCAGCGT GTGATCCTAC CAAGGATGGG TAAGGTTGGG AACTTGGCCT TGGCAGACAT AAGTGAGAAA GATTTAGTGA
AGGTCCTTGA TGTGTATGAA AGTAGGCTCT CTCAAAGCTC ATACCTTGCA GGAGATTTTT TCTCTTTGGC TGATCTCAGC
CACCTTCCAG GGCTTGGACA TCTTATTGAG GAAGCCAAAC TTGGCCACTT GGTAACTGAG AGGAAGAATG TCTATGCATG
GTGGCAGAAA ATTTCAAACA GGCCAGCTTG GAAGAAGTTA AAAGATCTGG CTCACTGATT TAAACAGCAG TTAGTTTATT
ATATAACTTA CGACTATCTC ATTACCATCA ATTTTTACTT GGCACTTTAT TATACAAATA ATGTGTTGTA AAAATTCTTG
AGAGAATAAG TTCGTCATTA GTAAGTTTGT CTTATCATGA AAGATTGATT CTGTTTAAAA ATTTCTTTTG TAA

>Vigan.05G157100.01
ATGGTGGTGA AGGTGTATGG TGATGTAAGG GCAGCATGCC CTCAAAGAGT GATGCTGTGC CTCTTGGAGA AAGGAGTAGA
CTTTGAACTT GTGCCTATTG ATCTTCAACA GGGACAACAT AAGACACCTC AATTCCTTCT CCTACAGCCC TTTGGTCAAG
TTCCAGTTGT GGAAGACGGT GATTTCAGGC TCTTTGAATC AAGAGCTATT ATAAGGTACT ACGCAACAAA ATATGCAGAT
CGTGGTAGTG AGCTAATGGG TAAAACCTTA GAGGAAAGGG CTTTGGTGGA GCAGTGGCTA GAAGTAGAAG CACACAACTT
TAATAATTTA TGCTTCACTA TAATGTTTCA GCGTGTGATC CTACCAAGGA TGGGTAAGGT TGGGAACTTG GCCTTGGCAG
ACATAAGTGA GAAAGATTTA GTGAAGGTCC TTGATGTGTA TGAAAGTAGG CTCTCTCAAA GCTCATACCT TGCAGGAGAT
TTTTTCTCTT TGGCTGATCT CAGCCACCTT CCAGGGCTTG GACATCTTAT TGAGGAAGCC AAACTTGGCC ACTTGGTAAC
TGAGAGGAAG AATGTCTATG CATGGTGGCA GAAAATTTCA AACAGGCCAG CTTGGAAGAA GTTAAAAGAT CTGGCTCACT
GA

>Vigan.05G157100.01
MVVKVYGDVR AACPQRVMLC LLEKGVDFEL VPIDLQQGQH KTPQFLLLQP FGQVPVVEDG DFRLFESRAI IRYYATKYAD
RGSELMGKTL EERALVEQWL EVEAHNFNNL CFTIMFQRVI LPRMGKVGNL ALADISEKDL VKVLDVYESR LSQSSYLAGD
FFSLADLSHL PGLGHLIEEA KLGHLVTERK NVYAWWQKIS NRPAWKKLKD LAH*