GBrowse Details

Vigan.05G106300.01

Basic Information:
Name: Vigan.05G106300.01
Multiple alignment
Variant Information
Position: Chr05:8191199..8194381 (+ strand)
Length: 3183
Functional Information:
Description: Similar to Peroxidase. [O23961, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.33,0.97,63.04,18.38,178.24,17.86,167.18,28.49
Automatic updates:
Name: NM_001250448 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase, pathogen-induced (GMIPER1), mRNA.
PubMed ID: 9856343 NCBI(pubmed)
Status: Known Variant
Name: NM_001354716 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase 15-like protein (LOC100804829), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:8191199..8191387 (+ strand)
Length: 189
Type: five_prime_UTR
Position: Chr05:8191388..8191609 (+ strand)
Length: 222
Type: CDS
Position: Chr05:8192802..8192993 (+ strand)
Length: 192
Type: CDS
Position: Chr05:8193249..8193414 (+ strand)
Length: 166
Type: CDS
Position: Chr05:8193524..8194002 (+ strand)
Length: 479
Type: CDS
Position: Chr05:8194003..8194381 (+ strand)
Length: 379
Type: three_prime_UTR

>Vigan.05G106300.01 class=Sequence position=Chr05:8191199..8194381 (+ strand)
ATAAAAGTAA ATAAGTAGGT AGGAAAGAGT AACATAGGGA AAGTTAAGAA TGAGTGTTTC AAATATCAGC TAGCCGACGC
CATGAATATC CACCATGGCC ATTTGTTCCT ATAAATAAAG GCTTCGTATC TGCCTAACTT GCACGCCGAC AAACGCAGAG
GTAAAGACAA CAAGTTAAGG AAAGGAAAAA TGAGGGGTTT TCATGGAACA CTGACAGCTC TGTGTTGTGT AGTGGTTGTG
CTTGGAGTGT TTCCACTCTC TCTAGATGCA CAACTTGATC CTTCCTTTTA CAGAGACACA TGTCCTAGGG TTCACTCCAT
TGTTCGTGAA GTCGTCAGGA ACGTTTCAAA GAAGGACCCT CGCATGCTCG CCAGTCTCAT TAGACTTCAC TTTCATGACT
GCTTTGTTCA AGTACGCATG CACACATTCA TACTTTCTCT CTTTTCTTTT CCTGCTTAAC CTATCTTCTT TTCACCAGAC
ATTTTTTTAC ATACTTTCTT TCTTCTTCTA CACGTAAGTG TATTTGTGAA ACACTTTTCA TCGGACGTTA AGGTAAGAAC
ATAGATTTTT TTCTGTGCAC CAAACCAAAC TTCATATGGA AACTAAACAA ATCGCTGAAG ATTTGAGATA ATACCATTTG
CCTTCCGGCA GCTTCCATTC ACCACTCCCT ATTTTAAGTA GAGCTTGCAA AACTTGTAAC CCGCTCGATC CCGATCCCCA
GGTTGCTCAC TTAGTGAGTA AACATAACTC GATTAATTTA TTAACGAGTT AAAAAAATTT GAATCCCACT TAACCATCAC
GGATTGGTAA GTTAAACGGA CTGAGTTAGT ATCTTACTTA ATTATAAGTT TTTTTTTAAA TAAAAAAAAT TATAATTTCT
TTTTAATTAT TATATTAGTG AGTTAAATAG ATAAATTTAT AATATTTTTT TCTTGAAATA TTTTTTTTAT CTCATCTATA
ATATAATAAA AAATTATTAA CTAATAATAT TAAAATATAA TTAAATTAAA TTAGGTGAAT TGGTGAATCA ATCGATTCAA
TTTATATAAA CTAGATTTTA AGTGAGTTAA ATTAAAAATT AATCCTCATA AATTTTTTTA TTTTTTTTAA ACTCAACCAT
GTTCAAACTC ATAATAAAAC AGATTAGATC GGGGTTTCAA GTGATCACTA ATTTTAAGTA TACAGTAAAT AATGGCATCC
ACGAATTTTC TTTAATTTAT GGCAGTACCA AGGGTCCCAG GCACCGGTGA CCCTCATTAA TTCTAACCTC CCTCTTTCTT
CGTTATTGAA CCTGATCTCA TTTTAGCTCT ATCATTTTTA ACTATACTAT GTTTGATTCG CATCCAGTTG TGATGTTATA
TTATATATAA AATATAAGTC TGATGAAAAA TACGATGTAA TTAAAAATAT TCCACCCATT TTTTTCTTCT ATCTTTACTG
CGGAAAGATA TTATTATTAT TATTATAAGA ATAGCACTTT CACTGTACAT TATTTTTGTC CTCTCGGTTG ATCATTTACC
GTTATTAGTA TTTTGTACAA TAAACAAGTG AAAAGATAAA CTCATATTAT GATCTGATGA ACCAAGAACG TTGTGGCATG
CAGGGATGTG ATGCCTCGGT TTTATTGAAC AACACTGCTA CAATAGTGAG TGAGCAGCAG GCTCTGCCAA ACAACAACTC
GTTAAGAGGT TTGGATGTTG TGAACGATAT CAAGACAGCA GTGGAAAATG CTTGCCCCGG CGTGGTTTCT TGTGCAGACA
TTCTTACCCT TGCATCTGAA ATATCTTCAG TTCTGGTATA CATAAATGCT GTTTCCAATT TATTTTACTT GTGTTTGAGT
ATCAAATATA TGTTTGACCA AATTCATATA GAATGAAATA TTTAATCTTA CACTTGAGTA CAAAACATGA TTTCTTGTAA
ATCATGATTA TGCAGAGATC TTTCAGAAAA GCATATTTAT GTTGATCATG AATATAGTAA CTCAAAAGTC TATGAAGTCC
GTGATGTTCA TTTAATTAAG AGTTATGCTA AAACGAGTTT GTTAATATAG GGAGGTGGTC CTGACTGGAA AGTTCCATTG
GGAAGAAGAG ATAGTTTAAC AGCAAACAGA ACACTTGCCA ATGAAAACCT TCCAGCTCCT TTCTTCAACC TCACCCTACT
GAAAGCTGCA TTTGCTAAAC AAGGCCTTGA CACTACTGAT CTAGTTGCAC TATCAGGTAA TGAAATTTAT CCTGTGTTGA
AACAATTAGA AACAATAACA AATGGGAAAT TCACCATCTT CTGATACAAC ACATGATCAA TTAGTATATA CATGATTCAT
TTCAGGTGCT CATACATTTG GCAGAGCTCA CTGTTCTTTC ATTCTTGACC GATTGTACAA CTTCAGTGGT ACTGGAAGAC
CCGACCCAAC TCTGGACACA ACTTATTTAC AACAATTACG GTCACAGTGC CCCCAAGGTG GACCTAACAA CCTTGTAAAT
TTTGATCCAA CTACTCCTGA CAAAATCGAC AAGGCCTACT ACTCCAATCT TGTGGTTAAA AAGGGTTTGC TTCAGAGTGA
TCAAGAGTTG TTCTCAACGC CCGGCGCTGA TACCATTCCC ATTGTCACCA GGTTCAATAG CGATCAAAAG GTTTTCTTTG
ACGCATTTGA GGCTTCGATG ATTAAGATGG GTAATATTCG TGTGCTCACT GGGAAGCAGG GAGAAATCAG AAAGCACTGT
AATTTTGTTA ACAAGAAATC TGTTGAACTT GATACCGTGG TCTCTGAGGA ATCTTCTGCA GAGGGTCTGG TTAGCTCTTT
CTAAATGATT TGAGGCCATC AATAAGCTAG TTTTTAGCCA CACTCATGCC ATGTGCCTGC CACTTGTTAT GTTGATGTGT
GTTAGATTTT CTTTGTTGTA GTTTCAATCG TGTATTTTAG TTTTGGAAAG AGATCCTGAA GAAGCTAAAA TATGATCTAT
CATTCGAGGA TAGAAGTTGA GCCGAACATT TAAACTATAA TTGACCGTTG TTTGTATTTA TTGGCTTCCA TCTGGCCAAT
GGATCAACTT GCCATTTGAA GAATGATAGT TTAAATGAAA TCTTCAGAAG AGGACCCACT CTTGTTCTTA CACATGCGAA
ATGATATGGA TCTATGGTTT TGAATTTTCT CGAAAAAAGA AAAAAAAAAC ATTTCACGTT TAA

>Vigan.05G106300.01
ATAAAAGTAA ATAAGTAGGT AGGAAAGAGT AACATAGGGA AAGTTAAGAA TGAGTGTTTC AAATATCAGC TAGCCGACGC
CATGAATATC CACCATGGCC ATTTGTTCCT ATAAATAAAG GCTTCGTATC TGCCTAACTT GCACGCCGAC AAACGCAGAG
GTAAAGACAA CAAGTTAAGG AAAGGAAAAA TGAGGGGTTT TCATGGAACA CTGACAGCTC TGTGTTGTGT AGTGGTTGTG
CTTGGAGTGT TTCCACTCTC TCTAGATGCA CAACTTGATC CTTCCTTTTA CAGAGACACA TGTCCTAGGG TTCACTCCAT
TGTTCGTGAA GTCGTCAGGA ACGTTTCAAA GAAGGACCCT CGCATGCTCG CCAGTCTCAT TAGACTTCAC TTTCATGACT
GCTTTGTTCA AGGATGTGAT GCCTCGGTTT TATTGAACAA CACTGCTACA ATAGTGAGTG AGCAGCAGGC TCTGCCAAAC
AACAACTCGT TAAGAGGTTT GGATGTTGTG AACGATATCA AGACAGCAGT GGAAAATGCT TGCCCCGGCG TGGTTTCTTG
TGCAGACATT CTTACCCTTG CATCTGAAAT ATCTTCAGTT CTGGGAGGTG GTCCTGACTG GAAAGTTCCA TTGGGAAGAA
GAGATAGTTT AACAGCAAAC AGAACACTTG CCAATGAAAA CCTTCCAGCT CCTTTCTTCA ACCTCACCCT ACTGAAAGCT
GCATTTGCTA AACAAGGCCT TGACACTACT GATCTAGTTG CACTATCAGG TGCTCATACA TTTGGCAGAG CTCACTGTTC
TTTCATTCTT GACCGATTGT ACAACTTCAG TGGTACTGGA AGACCCGACC CAACTCTGGA CACAACTTAT TTACAACAAT
TACGGTCACA GTGCCCCCAA GGTGGACCTA ACAACCTTGT AAATTTTGAT CCAACTACTC CTGACAAAAT CGACAAGGCC
TACTACTCCA ATCTTGTGGT TAAAAAGGGT TTGCTTCAGA GTGATCAAGA GTTGTTCTCA ACGCCCGGCG CTGATACCAT
TCCCATTGTC ACCAGGTTCA ATAGCGATCA AAAGGTTTTC TTTGACGCAT TTGAGGCTTC GATGATTAAG ATGGGTAATA
TTCGTGTGCT CACTGGGAAG CAGGGAGAAA TCAGAAAGCA CTGTAATTTT GTTAACAAGA AATCTGTTGA ACTTGATACC
GTGGTCTCTG AGGAATCTTC TGCAGAGGGT CTGGTTAGCT CTTTCTAAAT GATTTGAGGC CATCAATAAG CTAGTTTTTA
GCCACACTCA TGCCATGTGC CTGCCACTTG TTATGTTGAT GTGTGTTAGA TTTTCTTTGT TGTAGTTTCA ATCGTGTATT
TTAGTTTTGG AAAGAGATCC TGAAGAAGCT AAAATATGAT CTATCATTCG AGGATAGAAG TTGAGCCGAA CATTTAAACT
ATAATTGACC GTTGTTTGTA TTTATTGGCT TCCATCTGGC CAATGGATCA ACTTGCCATT TGAAGAATGA TAGTTTAAAT
GAAATCTTCA GAAGAGGACC CACTCTTGTT CTTACACATG CGAAATGATA TGGATCTATG GTTTTGAATT TTCTCGAAAA
AAGAAAAAAA AAACATTTCA CGTTTAA

>Vigan.05G106300.01
ATGAGGGGTT TTCATGGAAC ACTGACAGCT CTGTGTTGTG TAGTGGTTGT GCTTGGAGTG TTTCCACTCT CTCTAGATGC
ACAACTTGAT CCTTCCTTTT ACAGAGACAC ATGTCCTAGG GTTCACTCCA TTGTTCGTGA AGTCGTCAGG AACGTTTCAA
AGAAGGACCC TCGCATGCTC GCCAGTCTCA TTAGACTTCA CTTTCATGAC TGCTTTGTTC AAGGATGTGA TGCCTCGGTT
TTATTGAACA ACACTGCTAC AATAGTGAGT GAGCAGCAGG CTCTGCCAAA CAACAACTCG TTAAGAGGTT TGGATGTTGT
GAACGATATC AAGACAGCAG TGGAAAATGC TTGCCCCGGC GTGGTTTCTT GTGCAGACAT TCTTACCCTT GCATCTGAAA
TATCTTCAGT TCTGGGAGGT GGTCCTGACT GGAAAGTTCC ATTGGGAAGA AGAGATAGTT TAACAGCAAA CAGAACACTT
GCCAATGAAA ACCTTCCAGC TCCTTTCTTC AACCTCACCC TACTGAAAGC TGCATTTGCT AAACAAGGCC TTGACACTAC
TGATCTAGTT GCACTATCAG GTGCTCATAC ATTTGGCAGA GCTCACTGTT CTTTCATTCT TGACCGATTG TACAACTTCA
GTGGTACTGG AAGACCCGAC CCAACTCTGG ACACAACTTA TTTACAACAA TTACGGTCAC AGTGCCCCCA AGGTGGACCT
AACAACCTTG TAAATTTTGA TCCAACTACT CCTGACAAAA TCGACAAGGC CTACTACTCC AATCTTGTGG TTAAAAAGGG
TTTGCTTCAG AGTGATCAAG AGTTGTTCTC AACGCCCGGC GCTGATACCA TTCCCATTGT CACCAGGTTC AATAGCGATC
AAAAGGTTTT CTTTGACGCA TTTGAGGCTT CGATGATTAA GATGGGTAAT ATTCGTGTGC TCACTGGGAA GCAGGGAGAA
ATCAGAAAGC ACTGTAATTT TGTTAACAAG AAATCTGTTG AACTTGATAC CGTGGTCTCT GAGGAATCTT CTGCAGAGGG
TCTGGTTAGC TCTTTCTAA

>Vigan.05G106300.01
MRGFHGTLTA LCCVVVVLGV FPLSLDAQLD PSFYRDTCPR VHSIVREVVR NVSKKDPRML ASLIRLHFHD CFVQGCDASV
LLNNTATIVS EQQALPNNNS LRGLDVVNDI KTAVENACPG VVSCADILTL ASEISSVLGG GPDWKVPLGR RDSLTANRTL
ANENLPAPFF NLTLLKAAFA KQGLDTTDLV ALSGAHTFGR AHCSFILDRL YNFSGTGRPD PTLDTTYLQQ LRSQCPQGGP
NNLVNFDPTT PDKIDKAYYS NLVVKKGLLQ SDQELFSTPG ADTIPIVTRF NSDQKVFFDA FEASMIKMGN IRVLTGKQGE
IRKHCNFVNK KSVELDTVVS EESSAEGLVS SF*