GBrowse Details

Vigan.05G102600.01

Basic Information:
Name: Vigan.05G102600.01
Multiple alignment
Variant Information
Position: Chr05:7882423..7886746 (+ strand)
Length: 4324
Functional Information:
Description: Similar to Uncharacterized protein. [I1L097, Glycine max]
InterPro: Sec20 (IPR005606)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:14.99,24.30,16.09,17.34,12.62,9.56,7.46,16.69
Arabidopsis thaliana homolog: AT3G24315.1
Automatic updates:
Name: NM_001252806 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100795925 (LOC100795925), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:7882423..7882720 (+ strand)
Length: 298
Type: five_prime_UTR
Position: Chr05:7882721..7883025 (+ strand)
Length: 305
Type: CDS
Position: Chr05:7883190..7883259 (+ strand)
Length: 70
Type: CDS
Position: Chr05:7883813..7883868 (+ strand)
Length: 56
Type: CDS
Position: Chr05:7884017..7884092 (+ strand)
Length: 76
Type: CDS
Position: Chr05:7884219..7884255 (+ strand)
Length: 37
Type: CDS
Position: Chr05:7886157..7886271 (+ strand)
Length: 115
Type: CDS
Position: Chr05:7886351..7886591 (+ strand)
Length: 241
Type: CDS
Position: Chr05:7886592..7886746 (+ strand)
Length: 155
Type: three_prime_UTR

>Vigan.05G102600.01 class=Sequence position=Chr05:7882423..7886746 (+ strand)
GTTTTATATA AATAAAAATT TAAGAAAATG TAACCACCAT CTTTAATCAG TATAAAATTA TGCATTTTAA GTATATTTCA
TTTTGAAAGA ACTACAGTGA AGCAACCAAC GAAGTCAATC AAATAATTAG AAAAGAAAAA GTGAGTTAAT AACAGAGTAA
CGAAGAGCAA AAGAAAAACA TAAACGAGAG TTGAGTAATT GAGTTCCTTA GTGGCGCTCA CAAATTGTTT AGAGATCCCA
TTAAACAGGG GAAGCAAAAA CAGCGTTGAA CACAGTAACA GAAAGCGATT GCGAGAAGAT GGAGGAATCA GAATCGACGA
TTGACAAGGT GGTGGAGGAG GTGGAAAAGG TGAAGAAGGA ATGGGATGAA ACGTACAGGA AAACGCAGAA ACATATCGAG
GCAATCGCAG AATATGGAAA ATCAGGAAGA GAGAAAGAGG AGAAAAATTC GCTCGCTAGG TTGAACGGGA TCGCTCAGGA
TGGCTTGTCA CTCCTCTCTT CCTTTCTCTT CACTCTCGAT CTTCTCGCCC CTCAGTTGCC CTCCCCGCCG GAGGTCAAAT
CTGCACGCGC ATTGCTTCAA TCCTGGAAAA CCCTAACTCA AAAGTACCGC CCACACTCTT CCTGAAATGG AGATTAAATT
CGTGTTTGTT TGTTTGTTGG CTTTTGAATT GATTGAATAG TGCATTGATT TGAATTAGTG GTGGTGGATT GTCAGTTTAT
TATTTTTTAA TTTCTGTTGA TAGTGTTTAT TTTTTTTAAT TGAACAGTTT GCGGCTGAAT CTGAGGAATG CCAATTTGCA
AGCAAAGGCT AACTTGAGGA AAACTGCTCA GGAGGAGGCA ATATACTTAC TTTTTCTATT TAATTTTTGT GATGTTATTT
GGAAGGTTTT CTAGTCTTAT CGATAACCGC CCTGCTGAAT CTATATTACT ATTTAGCTAT TTGAATAAAC TTCTGCGGTA
GTTACTGTAG TAGAAGATTT GGATAAACTT CTCCATAAGT TTCCGTTGTT GAAAGATTAT GGAGTTATTT ATATAAACTT
CTCAACACAT GCTTAAAAAG GAAAATAAGA AGAAAAAATT AAATGAGTTT TTTTTTTTTA AGTTAAAACT TAGTTTTAGC
TTATGAATAA ACCAGTTTAT AAAATCTCTC ATGTTAGCTT CTGTAAAAGA TATTATTAAC TTCTACGCAA GTTAAGACTA
ACTAATATCA AAACTCATTT CATTATTCTT CCTTTTGAAT ATTTTTTTCT CGTAAAAAGT GTTTACAAGT AAATTTATTG
AAACAGGTCC TGTCTTGACC GCAAACATGT TGTATTGTGA TCATGGAGTT GTGTGAATTG TGTTTCTTTA CATTGTGCTG
TGCAACTTTT TTTGTTTCTT TATGGTGCAG AGAGAACTAC TTCTAGGTGG TGGAGAAGAG TCCACTGCTC GCAGGCGCAA
TTTACAGTAT GTCCTTGGTG TCTCATTTGG CTGGGATTAA ATTTTGCTTT GCGTATTTTA TTTATTTATT ATTTAGTGCC
ATTTCAATAG AAAATTCAGT TGGCATGATG CCATGATGAA GTATTTTTGT CTTCTAAATT GTGTGGCCTT CCAGGACAAA
AGCTGGAATG ACATCTGCTG CAGAAAGCAT CACAGAAAGC CTTCGTCGAA CTCGTCAGTT GATGGTTCAG GTTAGTTGTT
AGGTATATTT TTTCGCTAAA TTTATAGTTT AATTGTTCTC TCTAGTCCTC TGTAAAATTT GACCCTTTTT AGTATGCTGA
TTATCATATT CATCATATCT CTTCTGCCTT GATTAGGAGG TTGAAAGAAA CACAAGCACA CTTATGACTC TTGGTATGTA
CTTTTTCCTC CCTCTCTCCC TGTTTATATT GATGACGGCT TTTTTATCTC TCCAATTGTA CTTTAAGTTT CCATTGGTTT
TAAATCATGT TATCTTGGGT GTGTGTGAAA TTTATCTGAT GACTAATAAA AATGTTTAAA AGAATTTTAA GCTGGCCAAA
ATCAGCCAGT TGGACTGGAA GAAAGAAGGT TGCAGGCAAT GAGTTTCATA TTAGCTGGCG GCTGTTGTGT TTATAGCTCC
AGGTTGCTCA ATGTCATGAT TTTAAAGCCT TCTTTTCTTT TGAAATCAAT CTTCGTGTCC ACCCCCACAA TATTCAAGGC
CCTCAAGTTT TCTAGATTTG AAAGTTTTAT AAGAAATTGA TGGGATTAAT TATTACTATG AATTTTTCAC ATTCTCGTTC
TACCACTACT AGTGAATGTA GTGCAGTGGA ACTAAAATAT TTGTTAATAA ATTGAAAGAT TCCATGAAAA TCAAGATTAT
GCTTAGCGTC TTGGATTAAT ATAATGTGAA CAGAGCACTA TGGTGACACT GATATGGATC ATAAAAACAA TCTTTGTTAC
CTCCTCCCTG TCTTGAATTA CTTTTGGGCC CAATCAATTT TCATTTAGCA TAACTGCCTT TCCCCTCTAG TCTATGTTTG
TCCCACTTCC CTCTTTTCTG GAATTTTCTA AGAATCAAAT CCTTCTAACC ACAAATCAAG TTACATATCC TTGAAAAAAA
AGCTCTTGAA ACTGAATATT GAAGAAAATA AAGTCGAAAA ATCTTGGTGG CCTGTTCAAT TTCTATGACA TCATCTATTA
GGTGGAACTT GTTAAAGGTT TATAAAGTTT CCTTGATCGT TTGTTTGCTA GAATTGACAA TTTGGAGCAT TTATATGTTG
AAAGTGTACT CAATCAGCCT CAAATTTTGA GCCTTAAAGC AAAGTATGCT GTTGTGCCAT TACTGTGTGA ACTGAAGCTT
AAAGGTATTA TAGTTTGGAT TTACAAATGT GAAATTAAAT GGTCAGTTTC TCTAGGCATG CCATTTTGAT GAGGATAATA
AATTGTTTTT TAATTTCACA AGGTAAGACA CACCTTTGGC AGATAATAAT TAGTGGAACG TAAAGAGTTA GAATGAAAGG
ATAAGAGACA TCATTCCTTT TCCTCCTTGG ATTTAAGAAA AGAGAGGTCG AACATTTAAG TTGTATCCCA AATTTTGACC
AGCTCAAAAT GGAGGCTGGA AGGGAATACG AGGGATACTT TTTTTATCAT TATTAAAAGT ACACAAAAAA ATTGCTAATA
ACCTTTACTT TCTTTCACCT TCCTTTAACC ATCCCACCTG ATTCAAAAAT AGATTTGAGC TTTTTGTATG ATTTGACATA
GATTGTGTTT GAGGATATTC TATAGGGCTA CAATAACGAT AACATTAGTA ACTTTACACA CTTGTATATT AATCTGCTAA
CAGTTCCCAG GGGACATTGT TAAGTACTTG GTAGATAACT GTGTTTGGCT AACCTATCTG GTTCAATTTT TTTTTATACT
TGGAGCTAAT TTTTTTAGTC AGTTATGACC ACTGATTGAT AAGTTCATCT GATTTTTATG CTACCAAATA ACAATGACAT
ATTTTACAGT TTTGAAATTT GAATTGCATA TAGCTCCTTA TGCCCAGAAT ATTATATTAT GCATATTATA TTTGCATGTG
CCTGATTCTT TTACCTTCCC TGTGACGTAT TTATTATGTA AAGATGTTTC TTTGTTCTCT GGTTGTGCTG GAGTTATTGT
TAAAAATTTA AGTTCAATAA TATTGTTTTT GATGAACTGA GATGCTGGAA TTATTTCCAC TAATATGATT ACGGGACAGT
GAATTAATAG GGTTGTTCTG GATATTTGTT TGGCAAAATT GTTTTGGTAT ATAGATGAAT CAACTGGAGT GTTAAAGAAG
GCTGAAAGTG AATATAAAGG GCACCGCTCT TTGTTCATGA GAACACGAAA TCTCCTCTCC GTAATGCAAC GTCAAGATGT
CATGGACAGG TATGGAAACA GTTTATTTTA GTATCCACCC CATTTGTTGT TCCTGAATGT TATTACTAAC AATTAACTAT
TTGAATAGGT TGATTCTTGG GATTGGCTTT TTCTTATTCT CCCTTGCTGT TCTTTATGTT GTTTCCAAGC GGATTGGACT
ACTTACGTTG CAGAGAAAGA TTACTGAGGC AATAAAAGCT GGTGTTGTGG GACAAGCAGA CCTAAGACCC CAAGCTGTTG
CAGGGAACGT GAATCTGCAT CAAGTCAGAG TGGATCATGT TCATAATATA GAGGCTCCTT TAGAACAAAG AATACATGAT
GAACTATGAT GATATGTAAG CAATATACTC ATGTTGTCAA TGTTTATTTA TTTACATTTA GAGAGATCCT ATACCCTCAA
CACAACTTCA GCACCCTCTT AATTGCTTAA AGATGACAAA AGTAAAAGTA TTAGCAATCT TGATAGTTCA AAAAGCCTTT
TAAT

>Vigan.05G102600.01
GTTTTATATA AATAAAAATT TAAGAAAATG TAACCACCAT CTTTAATCAG TATAAAATTA TGCATTTTAA GTATATTTCA
TTTTGAAAGA ACTACAGTGA AGCAACCAAC GAAGTCAATC AAATAATTAG AAAAGAAAAA GTGAGTTAAT AACAGAGTAA
CGAAGAGCAA AAGAAAAACA TAAACGAGAG TTGAGTAATT GAGTTCCTTA GTGGCGCTCA CAAATTGTTT AGAGATCCCA
TTAAACAGGG GAAGCAAAAA CAGCGTTGAA CACAGTAACA GAAAGCGATT GCGAGAAGAT GGAGGAATCA GAATCGACGA
TTGACAAGGT GGTGGAGGAG GTGGAAAAGG TGAAGAAGGA ATGGGATGAA ACGTACAGGA AAACGCAGAA ACATATCGAG
GCAATCGCAG AATATGGAAA ATCAGGAAGA GAGAAAGAGG AGAAAAATTC GCTCGCTAGG TTGAACGGGA TCGCTCAGGA
TGGCTTGTCA CTCCTCTCTT CCTTTCTCTT CACTCTCGAT CTTCTCGCCC CTCAGTTGCC CTCCCCGCCG GAGGTCAAAT
CTGCACGCGC ATTGCTTCAA TCCTGGAAAA CCCTAACTCA AAATTTGCGG CTGAATCTGA GGAATGCCAA TTTGCAAGCA
AAGGCTAACT TGAGGAAAAC TGCTCAGGAG GAGAGAGAAC TACTTCTAGG TGGTGGAGAA GAGTCCACTG CTCGCAGGCG
CAATTTACAG ACAAAAGCTG GAATGACATC TGCTGCAGAA AGCATCACAG AAAGCCTTCG TCGAACTCGT CAGTTGATGG
TTCAGGAGGT TGAAAGAAAC ACAAGCACAC TTATGACTCT TGATGAATCA ACTGGAGTGT TAAAGAAGGC TGAAAGTGAA
TATAAAGGGC ACCGCTCTTT GTTCATGAGA ACACGAAATC TCCTCTCCGT AATGCAACGT CAAGATGTCA TGGACAGGTT
GATTCTTGGG ATTGGCTTTT TCTTATTCTC CCTTGCTGTT CTTTATGTTG TTTCCAAGCG GATTGGACTA CTTACGTTGC
AGAGAAAGAT TACTGAGGCA ATAAAAGCTG GTGTTGTGGG ACAAGCAGAC CTAAGACCCC AAGCTGTTGC AGGGAACGTG
AATCTGCATC AAGTCAGAGT GGATCATGTT CATAATATAG AGGCTCCTTT AGAACAAAGA ATACATGATG AACTATGATG
ATATGTAAGC AATATACTCA TGTTGTCAAT GTTTATTTAT TTACATTTAG AGAGATCCTA TACCCTCAAC ACAACTTCAG
CACCCTCTTA ATTGCTTAAA GATGACAAAA GTAAAAGTAT TAGCAATCTT GATAGTTCAA AAAGCCTTTT AAT

>Vigan.05G102600.01
ATGGAGGAAT CAGAATCGAC GATTGACAAG GTGGTGGAGG AGGTGGAAAA GGTGAAGAAG GAATGGGATG AAACGTACAG
GAAAACGCAG AAACATATCG AGGCAATCGC AGAATATGGA AAATCAGGAA GAGAGAAAGA GGAGAAAAAT TCGCTCGCTA
GGTTGAACGG GATCGCTCAG GATGGCTTGT CACTCCTCTC TTCCTTTCTC TTCACTCTCG ATCTTCTCGC CCCTCAGTTG
CCCTCCCCGC CGGAGGTCAA ATCTGCACGC GCATTGCTTC AATCCTGGAA AACCCTAACT CAAAATTTGC GGCTGAATCT
GAGGAATGCC AATTTGCAAG CAAAGGCTAA CTTGAGGAAA ACTGCTCAGG AGGAGAGAGA ACTACTTCTA GGTGGTGGAG
AAGAGTCCAC TGCTCGCAGG CGCAATTTAC AGACAAAAGC TGGAATGACA TCTGCTGCAG AAAGCATCAC AGAAAGCCTT
CGTCGAACTC GTCAGTTGAT GGTTCAGGAG GTTGAAAGAA ACACAAGCAC ACTTATGACT CTTGATGAAT CAACTGGAGT
GTTAAAGAAG GCTGAAAGTG AATATAAAGG GCACCGCTCT TTGTTCATGA GAACACGAAA TCTCCTCTCC GTAATGCAAC
GTCAAGATGT CATGGACAGG TTGATTCTTG GGATTGGCTT TTTCTTATTC TCCCTTGCTG TTCTTTATGT TGTTTCCAAG
CGGATTGGAC TACTTACGTT GCAGAGAAAG ATTACTGAGG CAATAAAAGC TGGTGTTGTG GGACAAGCAG ACCTAAGACC
CCAAGCTGTT GCAGGGAACG TGAATCTGCA TCAAGTCAGA GTGGATCATG TTCATAATAT AGAGGCTCCT TTAGAACAAA
GAATACATGA TGAACTATGA 

>Vigan.05G102600.01
MEESESTIDK VVEEVEKVKK EWDETYRKTQ KHIEAIAEYG KSGREKEEKN SLARLNGIAQ DGLSLLSSFL FTLDLLAPQL
PSPPEVKSAR ALLQSWKTLT QNLRLNLRNA NLQAKANLRK TAQEERELLL GGGEESTARR RNLQTKAGMT SAAESITESL
RRTRQLMVQE VERNTSTLMT LDESTGVLKK AESEYKGHRS LFMRTRNLLS VMQRQDVMDR LILGIGFFLF SLAVLYVVSK
RIGLLTLQRK ITEAIKAGVV GQADLRPQAV AGNVNLHQVR VDHVHNIEAP LEQRIHDEL*