GBrowse Details

Vigan.05G100500.01

Basic Information:
Name: Vigan.05G100500.01
Multiple alignment
Variant Information
Position: Chr05:7755712..7761574 (- strand)
Length: 5863
Functional Information:
Description: Similar to Phosphoglycerate mutase family protein. [XP_007026442.1, Theobroma cacao]
InterPro: Histidine phosphatase superfamily, clade-1 (IPR013078)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:36.01,20.66,8.00,27.76,4.57,8.34,3.56,11.04
Arabidopsis thaliana homolog: AT3G52155.1
Automatic updates:
Name: NM_001251231 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305626 (LOC100305626), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:7755712..7756240 (- strand)
Length: 529
Type: three_prime_UTR
Position: Chr05:7756241..7756303 (- strand)
Length: 63
Type: CDS
Position: Chr05:7759560..7759677 (- strand)
Length: 118
Type: CDS
Position: Chr05:7760238..7760417 (- strand)
Length: 180
Type: CDS
Position: Chr05:7760513..7760612 (- strand)
Length: 100
Type: CDS
Position: Chr05:7761241..7761478 (- strand)
Length: 238
Type: CDS
Position: Chr05:7761479..7761574 (- strand)
Length: 96
Type: five_prime_UTR

>Vigan.05G100500.01 class=Sequence position=Chr05:7755712..7761574 (- strand)
GTAAAATTAT ACAATGTGTG TTTGTAATTG AGAAAGTCAA GGAAAGAGGA AAGGCTAAAA TCCTTAAAGT GTGACATTTC
ATCAGAGATA GAGAGCATGA ATGTGGGTTT GTGCGAGATG CATTCTGTAA TCTGTACCAC CGCCGTCGCA CCTGACTTTT
CCGGTCGCCG GAGCAAAGTT CGGAACCCTA ATCAATTACG CGCTAAATCC TCTCTGCTCA TTCAAAAGCA GGATACCCAA
CTCGCAGAAC CCTTATCCGA CTCCGTCTCC GTCTCCCGCC GCCTCATTCT CCTTCGCCAT GCTAAGAGTT CCTGGGCAAA
CCGCTCGCTC CGCGGTAACC AATCTCCTTC CCAACTTTCA CTCTTAAACT CTCAATCTTT GCGCAATTAC TGAGTGAGAA
CATAGCCTTC TAACAAATTG GAATGGAAAC GGAGAAAAAG TGTTAATGCT TCCAAGTAGA ACAACTGGTG GGTTTCTGCT
TAGTGCAATT CCGTGGTCAA ACTCTCGAAC TTATTTACCT TACTCGTTTG AATAACGTCT GTGTTTTGGG ACATGCATGC
TCCCAGATTC TTGGAACACT TTTTTCTTAA CCTAAGTACT GTTTTGGGTC CATGCAAATG TACCGATTTT TACTTTTAGT
ACGTATTTTT GTTTTTTGGG TTATGATCCT TGATTCTTTG TATGTATTGG GTTCTTACTT TGACTTTGTT TCAAACTCCA
TCTAATGTTT TCGCTGTGTC ACATCCGTAT TCTTGTAAGG TGGGACTTCC ACAAAACCTG GTGGAGTAAT GTAAGCGATT
TTGTAACAGA AGGAAAAAAT TGAAGGTTTT AATACGGATT AAACGAAAGA CATAAAGGAC TTAAAGCAAA ACGTGTTATA
TTTGCCGGAG GAAAGGGATT TTTAAACCTT TATCTTAAGA ATTTGAAAGG AAGATAAATG AAAATATGTT TTTTTTTTCC
AGACCATGAT CGGCCTCTGA GCAAGTCTGG GAAAGAGGAT GCTGTGAGAG TTTCCCGCAA GCTCCAAGAG TTGGGTTGGA
TTCCTGAACT TATATTGTCT AGGTTAGCAA TTTTGTGGCT CTTGCTTGTG TTGTGGCATT TGAATTGATG CTCGTTGGGA
CGAACTGCTG TTTGAGTTGT GTATTGATTT GTTGCAGTGA TGCAGCGCGG ACTAAGGAGA CACTTAAAAT AATGCAAGAG
CAAGTGCAGG AGCTGGTGGA GGCTGAGGTT CATTTTATTT CTAGTTTCTA TTCAATTGCA GCTATGGATG GGCAAACTGC
AGAGCACCTT CAAAAGGTTA TTTGTAGATA TTCAAAGGAT GAGATACTTA CTGTCATGTG AGTATCTACA AATTCTAGAC
TTTTTGGGTC TAAATTTTTT TGTCTTGGCA TTTGAAGGTG GAGATTGATG AATGTGGCTA CATTAGAAAT GTTTGATATT
TTTCACAAGC ACAACCTATG GATAGAAACA TTGTAGTCAT TTTCAATACT TTCTTTGATG CCATATTTGT AGATTAAATT
TGATATACTT AATAAATCAC ACGTGGATTT CAAATTCAGA AAGTCAGTAG AGTCACATTT TACATTTTCC CTTTTCAAAA
CCATAATTAA TTGCGTTGAA CTATTTGATA GTGTTTTTGG ACTTCTTCCA CAATGAGGAT TGAGATTCAC ATGACTCGTC
TGTTGGTTGA ATCTGGGTGG TAATTGTGTG TAGGTGGTCG TTATCTCAAT CATGTACTAT AGAACCTATA GCTAAAAAAT
AGAGTTAATT TTCAAGTATT CTCTAAGGGG CCTTTATTTA TTGTGGGATA ATATCTTTCA ATTTTCTTTT TAAGAAACAA
AGTTTGATAT TTACAAACTA AGATTGATAA GTTTTGATAT CATTGAGTGG TATGCAGGTG CATGGGACAT AATAGGGGGT
GGGAAGAAGC AGCATCAATG TTTTCCGGGG CCTCTGTGGA ATTAAAAACA TGCAATGCTG CACTGCTTGA GACTGCTGGA
AAATCTTGGG ACGAGGTTTC ATTTCATTAC CTTGCATGAC ACTGCAATTA GTGTATTTCC TTTCAAGACT TTACTGTCTC
CCATTAAATA TTAGGTGCCG TCTTTCATTG TTTACCCTTT TTTATACTTA TACGAAGTTA TTATACTAAA TATTCACTGG
GGACCACACA AATATTTTAT GGACTCGTCT TTTGCAAACT ATTATTTGCT CTGATTAACT TCTATTTATT GGAGTTTCAA
ATCAATATGA AGTAATAAAT TTAAGGTTAA ACCATTTTCT GTACAAGTAA TTAAAGCGAT TGTATGCATG GATAATATTC
TGTATGTTTC AGCCATTGGA ATTTGATGTA CACAATCCTT TGTATGTGGC CAAATATTGG CCATGCAGTG AGGGTTTTAA
GTAGGTTTAT GCCAAATCCA AGTCAATCTC ATTGGGAAGC AGTTAAATGG ATTTTTGAGG TATCTACTAT GATGCACCAC
ATTGAGGTGT ATGTATTTTG GTAAGGGAGA ATTACATGTA CAAGGCTACA TAGATGTAGA CTTTGGAGGT GAAGTTGATC
ACTGAAGAAG TACCACTACA TTTTCACTGT TGGTCTACAA TTGTTGGTTT GACATTGTAG ATGCAAAAGA CAGTTGCTTT
ACCTACTATA GAGGTTGAGT ATATTGTAGT AACAAATGCC AATAAAGAGT TTATATGACT TCAAGGAATA TTAGCAAAGT
TGAGATTCAT CAACTAGAAG ATTTTTGGAT AGAGATAGTC AGAGTGTGAT GCATCTATCA AAGAATTTCA ACATTTTATT
TTATAGCAAA GTACATCTGT ATCTGTTATC CCTTCTTCCT CAATTATTTG CTTGATGGTG AGTTGTTAAC ATTTAGAAAG
ATCCAAGGAA GTAAGAACCC AACAGACATG ATGTGAAAGA TAGTAACCAT TAACAAACTA AAGTTGTGCT CCAGTTTAAC
TGGCTGTTAG AATAACAAAT TAGAGAAGGT TGCTGCATTG ATCAAGATGT GAAGACAAAT TGAAATTAGT CTTCAAGTGG
GATATTGTTG GATGTGTTTA TACAACCCCT AAAATTGAAT GAAGCGTGTC ATTCTTTTGT TTAGTTAAAG AAGGAAATTG
GGTGCATAAA ATAGAGTTAT ATGAGATTTC TCCATGCACG TATAAATGCC TCGCTGCTAT AACTACTTAT TTCCATTCCA
AAACCGATAA AGATTTTAAT GAGAGAAAAA CTTTAGTAAG AGAAAATATT CATTTATTTT TTTAGTGTAA TTGTGTTGAG
TGTTTGTAAA CATTATTTTT ATTTTTTCCC TTTTTCAAGT AGACGAACTC TGTTATTAAT TGTGTTATTA TTCTGCATTT
ATCATATTTC TCACAAATCA GATTATAGGG AATGTGCATA ATTTCTCAAC AATGGGTAAT CAGTCATTAC TAGGACCCAT
AATCTTTAAA GTGGACATAC CCCAAATTCC ATGGAGAAGA AATTGTGGTT TCCCATTAAA TGAAGAAATG ACACCTTATT
TATGTGTCTT TGGATTAGAT TTTGTGTATA TTGTAGATGT AGTAAAACTA TTCATGATCT TCACCTATCT ACATACTTTT
GGGGAATTCT CTTCCCTGTG TCTACCTGTC ACTTGGTCTT GATGATCAAT CACATGTAAA ACATGGTTAA CTTTGTTTCA
CAATTGGTTT AAGAGTAAAA TAATGCGATT GTATACAATT GTTGACCAAT ATTTATGACA GTAACGGGTA AATATGTCTC
GAAGTGGTTT AGTATCATGA AACTATTGAA ATATTTAATG GTGATTAACT TTGCTTCAGA AGTGGTTAAG AGTAAATGAA
TGTATGTATA TAATTACCAA TCTTTACTTG TGGTACTAAT GGTTAAATAT GGCACACAAA AGGTTAATAG TGTCTTCAAA
TTATTGAAAT ATGTAATGGT AGTTAACTTT GTCTCACAAG TGGTTAAGAG TTAAAGAATG TGATTGTATA CAATTATTAA
TTTATACTTC TGGCACTAGT GGTTAATATA CCTTACAAAT GGTTGATAAT GTCTTGAAGT TATTAAAATG TCTAATGGTG
GTTACTGTGC CTTACAAATG GTTAATTGGG TCGGGTGGAT GCTTTAAATG GGACGTTCTT CTTTTTCCTT AGTAGAGTTC
CTTGATAGTC ACAAGTTGCT TTTACCTGGA TGCAGTGTTG CTATTCACTG AAAGTGTATA GTTTTTCTCA TGTATGATTA
AGCATCCTTC GTAGTTCATA AAATTTCTCG AGAGTGTTTT GTGGGGGAAC ACTATTGTTT CACTTGTGGA AAATGTTTAT
TTTTCTTTTG ATTGCTTATA ATTAATTTTT GGGGGTTAAG TGACTCTTAT TGATTAGAGG TTTGGGATAT CTGTAATAAA
ATCTGTGACA TGAATGCTGT ATGGCATGTT TGTTTCTTAA TTAAAGCAGC CTAAACCCCA TATGAAATCA AAGCTTGTGT
CTTGGTCAGT TGAGTTCAAG TGGGGTTCGA GCTGTTTCAT GGGAAAAACA AATATGCCCA TAATAGTTTG GGAATTACCT
TTTAAAATCA AACTTTTTTA TAAAACTGAT AGTTCTAGAT TCCTAGTAAC TGCGGGCATG ATGAAGAAAG CCTGTTCCTT
GTGGTCATCA TCACTTCCTG GAAATTACTC CTTCGCTAAA TCTGATGCAA CTGTGACTCA TAATGTGTTG ACGGTGTAAC
CCAAGATAGT CAGTTATTGC TTCCTTGAAT TTCCACAAAG TTGTTTCCTA TAACTAATTG CTATTATGCC TGACACTTGC
CCCAAAAAGA AAAGCTATTA ATAGAATTTT ACTTTGGAAA CAGGCGAATT TTGTTCATTC ACCACACTGC TCACTTTATA
AATTTCAAAG TATGTTATAA AGTGTCAATT CAGACTCTAA GCGCTTCGTA TACTTGGACG ATTATCCACA AAGCTTTAGT
TTTTAATGCC AGGGTGGTGG CAGGAGGTAT AAGTCTTAAA GTTTTGTAAC ATTATTGTAA CCTTTCCCCA CCCAGAAAGA
GCTATGGAAT GGATTAGAAA ACACTTTGAT AGGTGTGTTT TGACCTTTTA GTTTATCTTC ACAGGCATAA AAAGAGGGAG
GGGGGCGCAC CGTGCAGGGA GGGAACCTTA ATTACTTGCA TACCTTGCAG CAGTGCAAGA CTTTCGTTCA ATTTTATATT
AGCTCCCAAA AGATAAAAAT ATTCAGTTTT GCAGTGACAA AAAGATGTGT ATCTAACTTT GTATCTTACA GGCATTTGCC
GCCGCAGGAT TTGGTGGATG GAAGCTTCAA GGCATAGTAA AGCCAAGTAG CTAGCTTGCT GTGACTTTCC TGCTGGGTAA
ACTTACAAAT AAATATGCAA GAGGTTGGAA GCGTCAATAC TTATTCAAGC AAACCTAAAA GGCCTCAGTT AGGTAAAGGC
TACAGTACTG ATGACTTCGG AAAGTATATA CTGGAGGATA TGATGCCAAA AGCTTCAGTT AGATCTGTTT AATTTAGCAG
CTGTGATGTT TACATGGTGA TTCAAGATGA TACATGGCTG AGGATAATGT GCAGGATCTC AATGGTTCAT ATATGCTGCT
TGGTATGGGT CATTTGTTCA TTGAAGTGAA CTTATGCTGC TAGGTGGTTG TTGATTCATA CTCAACTACA GGTTTCCAAA
GAAAAAAAAA TAATGCTTCT GTAAATCATA TGCTGTGAAA AGAAAAAGCA TTACTTGTTA CTTTTCTCCC TTTTTACTCC
GTTCTTCTCT TACATTTTGA TAATAAAGAC TGAAAATCTA TTTTGAAATA CCAAAATGCT ATTGGTTAAT GATTATCAGC
AACCAAAACG ACAAGAATTC CCG

>Vigan.05G100500.01
GTAAAATTAT ACAATGTGTG TTTGTAATTG AGAAAGTCAA GGAAAGAGGA AAGGCTAAAA TCCTTAAAGT GTGACATTTC
ATCAGAGATA GAGAGCATGA ATGTGGGTTT GTGCGAGATG CATTCTGTAA TCTGTACCAC CGCCGTCGCA CCTGACTTTT
CCGGTCGCCG GAGCAAAGTT CGGAACCCTA ATCAATTACG CGCTAAATCC TCTCTGCTCA TTCAAAAGCA GGATACCCAA
CTCGCAGAAC CCTTATCCGA CTCCGTCTCC GTCTCCCGCC GCCTCATTCT CCTTCGCCAT GCTAAGAGTT CCTGGGCAAA
CCGCTCGCTC CGCGACCATG ATCGGCCTCT GAGCAAGTCT GGGAAAGAGG ATGCTGTGAG AGTTTCCCGC AAGCTCCAAG
AGTTGGGTTG GATTCCTGAA CTTATATTGT CTAGTGATGC AGCGCGGACT AAGGAGACAC TTAAAATAAT GCAAGAGCAA
GTGCAGGAGC TGGTGGAGGC TGAGGTTCAT TTTATTTCTA GTTTCTATTC AATTGCAGCT ATGGATGGGC AAACTGCAGA
GCACCTTCAA AAGGTTATTT GTAGATATTC AAAGGATGAG ATACTTACTG TCATGTGCAT GGGACATAAT AGGGGGTGGG
AAGAAGCAGC ATCAATGTTT TCCGGGGCCT CTGTGGAATT AAAAACATGC AATGCTGCAC TGCTTGAGAC TGCTGGAAAA
TCTTGGGACG AGGCATTTGC CGCCGCAGGA TTTGGTGGAT GGAAGCTTCA AGGCATAGTA AAGCCAAGTA GCTAGCTTGC
TGTGACTTTC CTGCTGGGTA AACTTACAAA TAAATATGCA AGAGGTTGGA AGCGTCAATA CTTATTCAAG CAAACCTAAA
AGGCCTCAGT TAGGTAAAGG CTACAGTACT GATGACTTCG GAAAGTATAT ACTGGAGGAT ATGATGCCAA AAGCTTCAGT
TAGATCTGTT TAATTTAGCA GCTGTGATGT TTACATGGTG ATTCAAGATG ATACATGGCT GAGGATAATG TGCAGGATCT
CAATGGTTCA TATATGCTGC TTGGTATGGG TCATTTGTTC ATTGAAGTGA ACTTATGCTG CTAGGTGGTT GTTGATTCAT
ACTCAACTAC AGGTTTCCAA AGAAAAAAAA ATAATGCTTC TGTAAATCAT ATGCTGTGAA AAGAAAAAGC ATTACTTGTT
ACTTTTCTCC CTTTTTACTC CGTTCTTCTC TTACATTTTG ATAATAAAGA CTGAAAATCT ATTTTGAAAT ACCAAAATGC
TATTGGTTAA TGATTATCAG CAACCAAAAC GACAAGAATT CCCG

>Vigan.05G100500.01
ATGAATGTGG GTTTGTGCGA GATGCATTCT GTAATCTGTA CCACCGCCGT CGCACCTGAC TTTTCCGGTC GCCGGAGCAA
AGTTCGGAAC CCTAATCAAT TACGCGCTAA ATCCTCTCTG CTCATTCAAA AGCAGGATAC CCAACTCGCA GAACCCTTAT
CCGACTCCGT CTCCGTCTCC CGCCGCCTCA TTCTCCTTCG CCATGCTAAG AGTTCCTGGG CAAACCGCTC GCTCCGCGAC
CATGATCGGC CTCTGAGCAA GTCTGGGAAA GAGGATGCTG TGAGAGTTTC CCGCAAGCTC CAAGAGTTGG GTTGGATTCC
TGAACTTATA TTGTCTAGTG ATGCAGCGCG GACTAAGGAG ACACTTAAAA TAATGCAAGA GCAAGTGCAG GAGCTGGTGG
AGGCTGAGGT TCATTTTATT TCTAGTTTCT ATTCAATTGC AGCTATGGAT GGGCAAACTG CAGAGCACCT TCAAAAGGTT
ATTTGTAGAT ATTCAAAGGA TGAGATACTT ACTGTCATGT GCATGGGACA TAATAGGGGG TGGGAAGAAG CAGCATCAAT
GTTTTCCGGG GCCTCTGTGG AATTAAAAAC ATGCAATGCT GCACTGCTTG AGACTGCTGG AAAATCTTGG GACGAGGCAT
TTGCCGCCGC AGGATTTGGT GGATGGAAGC TTCAAGGCAT AGTAAAGCCA AGTAGCTAG

>Vigan.05G100500.01
MNVGLCEMHS VICTTAVAPD FSGRRSKVRN PNQLRAKSSL LIQKQDTQLA EPLSDSVSVS RRLILLRHAK SSWANRSLRD
HDRPLSKSGK EDAVRVSRKL QELGWIPELI LSSDAARTKE TLKIMQEQVQ ELVEAEVHFI SSFYSIAAMD GQTAEHLQKV
ICRYSKDEIL TVMCMGHNRG WEEAASMFSG ASVELKTCNA ALLETAGKSW DEAFAAAGFG GWKLQGIVKP SS*