GBrowse Details

Vigan.05G098400.01

Basic Information:
Name: Vigan.05G098400.01
Multiple alignment
Variant Information
Position: Chr05:7568148..7572068 (+ strand)
Length: 3921
Functional Information:
Description: Similar to Uncharacterized protein. [I1L053, Glycine max]
GO: Biological Process: isoprenoid biosynthetic process (GO:0008299)
InterPro: Polyprenyl synthetase (IPR000092)
Terpenoid synthase (IPR008949)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.93,2.18,77.56,33.50,52.87,74.12,43.01,39.84
Arabidopsis thaliana homolog: AT4G17190.1, AT5G47770.1
Structure :
Position: Chr05:7568148..7568359 (+ strand)
Length: 212
Type: five_prime_UTR
Position: Chr05:7568360..7568470 (+ strand)
Length: 111
Type: CDS
Position: Chr05:7569114..7569138 (+ strand)
Length: 25
Type: CDS
Position: Chr05:7569311..7569426 (+ strand)
Length: 116
Type: CDS
Position: Chr05:7569549..7569635 (+ strand)
Length: 87
Type: CDS
Position: Chr05:7569742..7569858 (+ strand)
Length: 117
Type: CDS
Position: Chr05:7569947..7570035 (+ strand)
Length: 89
Type: CDS
Position: Chr05:7570511..7570562 (+ strand)
Length: 52
Type: CDS
Position: Chr05:7571024..7571119 (+ strand)
Length: 96
Type: CDS
Position: Chr05:7571279..7571323 (+ strand)
Length: 45
Type: CDS
Position: Chr05:7571402..7571491 (+ strand)
Length: 90
Type: CDS
Position: Chr05:7571571..7571642 (+ strand)
Length: 72
Type: CDS
Position: Chr05:7571758..7571886 (+ strand)
Length: 129
Type: CDS
Position: Chr05:7571887..7572068 (+ strand)
Length: 182
Type: three_prime_UTR

>Vigan.05G098400.01 class=Sequence position=Chr05:7568148..7572068 (+ strand)
TGGGTTATAT AATTGCATTA CACACGTGTG ACAGAAGACA CACTCACATG CAGGGTGAAG AGCGCCTCCT TCCTTAAAGT
CATCACTTCC CCTCTTTGTC GCCATTTCAT ATTTATGATC TCAAAATTCC AAGACCAAAA TTTGAAACAC CTACCCAAAT
TTCTCTGTTC TGATTTTTAC CTCTATTAAG TAATTAATTC TTCTTCTGAT CCATGGCGGA TCTCAAGTCC ACATTCTCAA
ACGTCTATTA CGTTCTCAAA GACGAACTCC TCCACGACCC CGCTTTTGAA TTCTCCGATG ACGCTCGCCA ATGGGTCGAC
CGGGTATTTT TTTTTCCTTT TAGTTTTACG AGTTTCTGCA TTTTGATTTA ATCGGAGTTG ATGGAGAAGA GTTATGTAAT
TGATATTTCA AAAAAAGGAG AGTGGATTTG GTTTATTACG GTGCTGGCGT GTCTTTCATT GAACACTGAC TGAGTAGATC
AACCACTAAT TGGGAGTTTA ATATTAAAAG GCCACACTAG TAGATTAGCA GACATGAGTT TAATCAACTT AATCAGTAAT
CTCGAGTTAA ATTATAAAAC AGCTTTATGG AAATAATATA TTGTTTTTAT CTGGTTCGAG TACAATTATA TTCAGTGAAG
AACATGTGTG GTTTAAAAAA TGTGTTTCAT TTGGATAAAT TTGAGGTTGA TGTGACGTCG GTCTGAATAT TTCTCAGATT
CAAAGCAGTT TAATGTTAAA AATCCGTAGT AGTAGATCAG CAGACATAAG TTTAGTCAAC TTAATCGGTA ATCTCGATGT
GATGTGGGTC TAAAAATTTC TCAGATTCAA TGGAGTTTAT TGTGGGATAT TTAAGTTATA CCATTACTTG TGTCTGTTGC
ATTACAGGTG TTTGCTATTT CATTGAAATG TATGTTATGA ATTTTGTTGT GTTACTTACT GTGTTATGTA TTACAACTTA
TTGCAGATGC TGGACTACAA TGTGCCAGGA GGTGTGGCTT GAGAATTTCA TGTGTTTGTG TTGAGTGATT TTTTTAGTTT
ATTGTTTGTC TGTTGCATTC CTTTCTAGGA AAGAACAGAG TGGAGGGGAA GGGGGTGTTC TGTTCTGAAG CACTGTTAAA
ACGAGATAAA GAGTATTGAT AAAAAGATGG ATTATAACTG CAGGAAAGTT GAACCGGGGA CTCTCAGTCA TTGACAGCTA
CAAACTGTTG AAAGAAGGAC AGACATTAAA TGATGACGAA ATTTTCCTTG CTAGTGCTCT TGGTTGGTGT ATTGAATGGG
TATGGCAGTT GAAAGCTTTT GCTTTTCTTG TTTAAATGAT TAAACTAGTT CTAATGGTTT CAGAGTTTAC TGTGATGATT
GCATTGGGGG ATCTTAAATA GTGTGTTGTT GAGTTTTGCA GCTTCAGGCG TATTTTCTTG TCCTTGATGA CATTATGGAT
AATTCGCACA CACGTAGGGG TCAACCATGC TGGTTTAGAG TGCCCGAGGT TTGCAGAAAA ATAAACATGA GCCATTGTGT
TATCTTTATG CTGCTGTTCT GATTAAGTAA TTATCACTGA TAATGTATTA ATCTCTAATT ATTGTATCGT GTAGGTTGGG
ATGATTGCAG CAAATGATGG AGTTTTACTA AGAAACCATA TTCCACGCAT TCTTAAGAAC CATTTTAGGG GAAAGCCATA
TTACGTAGAT CTTCTTGATT TGTTTAATGA GGTAGTACAA ATGTCAAAGT TTACATTATG TGGGACTATT CTAGTCAATA
TACTAAAATG TGACCATCTT GCTTTTTTTT TTCGTTTAGG TTGAGTTCCA GACTGCTTCA GGACAGATGA TAGATCTGAT
TACCACACTG CAAGGAGGAA AAGACCTCTC CAAATACACA TTAACTCTGT GAGTACGGGA AAACAAGGAG AACAATTGGA
GAGAAATTAT TATTGCTTAA CCACTTTTTT GACAAACATG AAATCCTGGA ACATATGTAA ATGTGACTAA AACAACTAAA
AGAAAAAAAG TATAAATTCT TCTGCCAGAG AGCAAATCAC GTCCGTTCTA TAGAGTTCAA TCAAGAGTAT TCCGTAAAAC
CTGACGGGAA GCTGGCACCA GAAGAGAGAT AACTGCTGGC TTTTCCTAAT TGATTCTGCA CATGCCTATT AGATATAGAC
GTGGCTATCT TTTTTGGCTG GGCGTGGTGA AGAATATGAT GTGAAATTTG CTTGTTACTA GTTCCTTCTC TTCTTGCTAG
CTAGCAATGT ACTATGTTTC AATGCGATCT ATACATTTTC TCTTCAGTTT CTTGTCCATT ATCCTTTTCT GTCTTGAGAA
ATCAGTACTA ATAATGATTG CATATGGATG TCATCTTCTG CAGGCATCGG CGTATTGTTC AGTACAAGAC TGCTTATTAT
TCGTTTTACC TCCCAGTATG TATTATTATC CTTTTTTTGG TATAACCTCG CTATTTTTGG TTTCGTCTTT GCCCTTTTCT
TAGAAACACT GGTGCCAAAT AGCTATCAGT TGCTCAGTAT TTTACACTGC TAGAATCTTT AACACTTTTC TGATTAAACT
AGAAAACAGA TAATAAAATG CATGTAATGT GTTATTCATT TGAAATCACA TATTTTCTTT TGACCTCCTT CTGGATTGAA
AGTTCGATAT GTTTCTAAAG AGTTATCATT TAAATGTAGT TTTTTTATTA TTATCTATTT GATTCATTTC GAATTGTCCT
GTAGGCTATC ATACAACTGA ATTGAAAGTT GATATGTTTC GATGAGTGTC ACTTAAAAGT GTGTTTTTAT TATCTATTAG
ATTCATTTCC AACAGTCCCG TTGGCCATTT GAATACATGA TCTGCTATTT ATCTATGCAT ATATCTCCTT ACACAGGTTG
CATGTGCATT GCTCATGGCG GGTGAGAATC TGGAAAACCA TGTTGATGTG AAGAACATTC TTGTTGAGAT GGGAACCTAC
TTTCAAGTAC AGGTAATACT TTGCTAGTAT AGTTTTGATC GCTTCTCTTA AGACCATTTA GACTCTAGAA TGATGTATGT
CTAGTGTATA CTTTCACTAT CAGCTTAAAA TATTTCATAA AAACTGTATT TTGACGTATC TTTTCTCTTC CCCTTTCCCC
TCTAATTTTA GGATGATTAT TTGGATTGCT TTGGGGATCC TGATACTATT GGAAAGGTGA GCATCCTGGA TAATTAATGG
ATACTGGAAA CATCAAGTTC TCTTTAATCT CATTCTAGTT ATCTATGGGA CCAGATAGGT ACAGATATTG AAGATTTTAA
ATGCTCTTGG TTAGTTGCAA AAGCTTTGGA GCTTAGCAAT GAGCAACAAA AGAAAGTTCT ATACGTAAGT GATCATCTTA
ATATATCCCG CATTTTTCCT GTGATAACAC TGCACTAAAT CACTTATTTT TGCGGTTTTT CAGGACAACT ATGGTAATGC
AGATCCAGAA AATGTTGCTA AAGTAAAGGC CCTGTATAAT GAGCTTAATC TTAAGGTTTG AACTTCATTT ACATCTACCT
CGTTAATAAT TTAGTTGCAA GTATCTAGCT AGCACATCAT GATTGATGTT GATTTTCTTT GGATTATTTA CTCTGAATCC
GAATGAATAG GGTGCATTTG AGGAGTATGA GAGCAAGAGC TATGAGAAGC TTGTAACTTC CATTGAAGCT CATCCTAGCA
AAGCAGTTCA AGCTGTATTG AAGTCCTTTT TGGCTAAGAT TTACAAGAGG CAGAAGTAGA GTGAGTGTAC GGCGAGGACC
AAAATTGTTT TAACGTGCAA TAGAAACTAG AGTTCTGATT TCTGTCTGGA GCCGAATATT GTTCCGGCAA AATTTTCAAC
GTTGATTTTC TTGTCTTCTA TCTTGTAAGC TGTCATGGGA TACTGGTTTG ACTATTAATA ATCTCTTCAT CCTTTTGCTC
A

>Vigan.05G098400.01
TGGGTTATAT AATTGCATTA CACACGTGTG ACAGAAGACA CACTCACATG CAGGGTGAAG AGCGCCTCCT TCCTTAAAGT
CATCACTTCC CCTCTTTGTC GCCATTTCAT ATTTATGATC TCAAAATTCC AAGACCAAAA TTTGAAACAC CTACCCAAAT
TTCTCTGTTC TGATTTTTAC CTCTATTAAG TAATTAATTC TTCTTCTGAT CCATGGCGGA TCTCAAGTCC ACATTCTCAA
ACGTCTATTA CGTTCTCAAA GACGAACTCC TCCACGACCC CGCTTTTGAA TTCTCCGATG ACGCTCGCCA ATGGGTCGAC
CGGATGCTGG ACTACAATGT GCCAGGAGGA AAGTTGAACC GGGGACTCTC AGTCATTGAC AGCTACAAAC TGTTGAAAGA
AGGACAGACA TTAAATGATG ACGAAATTTT CCTTGCTAGT GCTCTTGGTT GGTGTATTGA ATGGCTTCAG GCGTATTTTC
TTGTCCTTGA TGACATTATG GATAATTCGC ACACACGTAG GGGTCAACCA TGCTGGTTTA GAGTGCCCGA GGTTGGGATG
ATTGCAGCAA ATGATGGAGT TTTACTAAGA AACCATATTC CACGCATTCT TAAGAACCAT TTTAGGGGAA AGCCATATTA
CGTAGATCTT CTTGATTTGT TTAATGAGGT TGAGTTCCAG ACTGCTTCAG GACAGATGAT AGATCTGATT ACCACACTGC
AAGGAGGAAA AGACCTCTCC AAATACACAT TAACTCTGCA TCGGCGTATT GTTCAGTACA AGACTGCTTA TTATTCGTTT
TACCTCCCAG TTGCATGTGC ATTGCTCATG GCGGGTGAGA ATCTGGAAAA CCATGTTGAT GTGAAGAACA TTCTTGTTGA
GATGGGAACC TACTTTCAAG TACAGGATGA TTATTTGGAT TGCTTTGGGG ATCCTGATAC TATTGGAAAG ATAGGTACAG
ATATTGAAGA TTTTAAATGC TCTTGGTTAG TTGCAAAAGC TTTGGAGCTT AGCAATGAGC AACAAAAGAA AGTTCTATAC
GACAACTATG GTAATGCAGA TCCAGAAAAT GTTGCTAAAG TAAAGGCCCT GTATAATGAG CTTAATCTTA AGGGTGCATT
TGAGGAGTAT GAGAGCAAGA GCTATGAGAA GCTTGTAACT TCCATTGAAG CTCATCCTAG CAAAGCAGTT CAAGCTGTAT
TGAAGTCCTT TTTGGCTAAG ATTTACAAGA GGCAGAAGTA GAGTGAGTGT ACGGCGAGGA CCAAAATTGT TTTAACGTGC
AATAGAAACT AGAGTTCTGA TTTCTGTCTG GAGCCGAATA TTGTTCCGGC AAAATTTTCA ACGTTGATTT TCTTGTCTTC
TATCTTGTAA GCTGTCATGG GATACTGGTT TGACTATTAA TAATCTCTTC ATCCTTTTGC TCA

>Vigan.05G098400.01
ATGGCGGATC TCAAGTCCAC ATTCTCAAAC GTCTATTACG TTCTCAAAGA CGAACTCCTC CACGACCCCG CTTTTGAATT
CTCCGATGAC GCTCGCCAAT GGGTCGACCG GATGCTGGAC TACAATGTGC CAGGAGGAAA GTTGAACCGG GGACTCTCAG
TCATTGACAG CTACAAACTG TTGAAAGAAG GACAGACATT AAATGATGAC GAAATTTTCC TTGCTAGTGC TCTTGGTTGG
TGTATTGAAT GGCTTCAGGC GTATTTTCTT GTCCTTGATG ACATTATGGA TAATTCGCAC ACACGTAGGG GTCAACCATG
CTGGTTTAGA GTGCCCGAGG TTGGGATGAT TGCAGCAAAT GATGGAGTTT TACTAAGAAA CCATATTCCA CGCATTCTTA
AGAACCATTT TAGGGGAAAG CCATATTACG TAGATCTTCT TGATTTGTTT AATGAGGTTG AGTTCCAGAC TGCTTCAGGA
CAGATGATAG ATCTGATTAC CACACTGCAA GGAGGAAAAG ACCTCTCCAA ATACACATTA ACTCTGCATC GGCGTATTGT
TCAGTACAAG ACTGCTTATT ATTCGTTTTA CCTCCCAGTT GCATGTGCAT TGCTCATGGC GGGTGAGAAT CTGGAAAACC
ATGTTGATGT GAAGAACATT CTTGTTGAGA TGGGAACCTA CTTTCAAGTA CAGGATGATT ATTTGGATTG CTTTGGGGAT
CCTGATACTA TTGGAAAGAT AGGTACAGAT ATTGAAGATT TTAAATGCTC TTGGTTAGTT GCAAAAGCTT TGGAGCTTAG
CAATGAGCAA CAAAAGAAAG TTCTATACGA CAACTATGGT AATGCAGATC CAGAAAATGT TGCTAAAGTA AAGGCCCTGT
ATAATGAGCT TAATCTTAAG GGTGCATTTG AGGAGTATGA GAGCAAGAGC TATGAGAAGC TTGTAACTTC CATTGAAGCT
CATCCTAGCA AAGCAGTTCA AGCTGTATTG AAGTCCTTTT TGGCTAAGAT TTACAAGAGG CAGAAGTAG

>Vigan.05G098400.01
MADLKSTFSN VYYVLKDELL HDPAFEFSDD ARQWVDRMLD YNVPGGKLNR GLSVIDSYKL LKEGQTLNDD EIFLASALGW
CIEWLQAYFL VLDDIMDNSH TRRGQPCWFR VPEVGMIAAN DGVLLRNHIP RILKNHFRGK PYYVDLLDLF NEVEFQTASG
QMIDLITTLQ GGKDLSKYTL TLHRRIVQYK TAYYSFYLPV ACALLMAGEN LENHVDVKNI LVEMGTYFQV QDDYLDCFGD
PDTIGKIGTD IEDFKCSWLV AKALELSNEQ QKKVLYDNYG NADPENVAKV KALYNELNLK GAFEEYESKS YEKLVTSIEA
HPSKAVQAVL KSFLAKIYKR QK*