GBrowse Details

Vigan.05G083700.01

Basic Information:
Name: Vigan.05G083700.01
Multiple alignment
Variant Information
Position: Chr05:6387836..6393683 (+ strand)
Length: 5848
Functional Information:
Description: Similar to Uncharacterized protein. [I1MH24, Glycine max]
InterPro: Fbxo7/PI31 domain (IPR021625)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:262.25,234.90,31.17,47.89,35.95,49.42,58.36,45.01
Arabidopsis thaliana homolog: AT3G53970.1
Automatic updates:
Name: NM_001254408 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable proteasome inhibitor-like (LOC100814792), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:6387836..6388061 (+ strand)
Length: 226
Type: five_prime_UTR
Position: Chr05:6388062..6388236 (+ strand)
Length: 175
Type: CDS
Position: Chr05:6388344..6388515 (+ strand)
Length: 172
Type: CDS
Position: Chr05:6389669..6389809 (+ strand)
Length: 141
Type: CDS
Position: Chr05:6390301..6390381 (+ strand)
Length: 81
Type: CDS
Position: Chr05:6391710..6391787 (+ strand)
Length: 78
Type: CDS
Position: Chr05:6391892..6391926 (+ strand)
Length: 35
Type: CDS
Position: Chr05:6392021..6392084 (+ strand)
Length: 64
Type: CDS
Position: Chr05:6392882..6392959 (+ strand)
Length: 78
Type: CDS
Position: Chr05:6393458..6393536 (+ strand)
Length: 79
Type: CDS
Position: Chr05:6393537..6393683 (+ strand)
Length: 147
Type: three_prime_UTR

>Vigan.05G083700.01 class=Sequence position=Chr05:6387836..6393683 (+ strand)
GAATCACAGG GCACGCAACC ACAAAAAAAA ATGTGATTTA AGAAAGTCTT ATAAGATTTT TCTTTTTTTT TTTTATTGAA
AATACTGGAA GTCTCTCCAA TTCTTCCGAA GCACGTCTAA ACCCTCATCC ACCCCATTTT AATTTGATAG TAATTGAACT
ATTCAGTTTC AAAAGTTTTC TGAATTACAA CAGAAACACA AGAATTTGCC ATTGTTGAAA ACGTGGATGG CGAGTGAAAA
GTCGGTGCTT GCCGTGATCA GGGCCGCGAG GCCAACCTTC CGCAATCGAA ACGATAAAAT CGCCTTTGCC ATTCACTCCT
CCTTCCTAGC CTCCGGCTAT GTCCTTACCG CCACGGGTCC CCAGGCTCTC TCCGACAATG TGTTTTCTGA CCCATCAAAT
GGTAATAATG AAGAAATTTA AGAAACCAAA CTTTTCCCTT TATGCTTCCC TTTTCATTTT TTGATGCTTA TTTTTTATGT
TTGTTGATGT GCTGTGATTT GTGTATAGAT GAAGTATCCG TTGATAACTG GAACGAGCTA AACGAAGAGT ACGCGTTCGT
TTACGCGAAT CCAGAAAAAG GGTCGGAGAA AGTGCTTGTC AAGTGCCTTG TCATGAATGA CAAATTGCTA GTTCATGTTT
TGTCTCAAGG GTCGTCCGAG CCTTTAAGCC TCGAGATTGA GTAAGTGATA CTATTCTCTT TTCAATTTTG CTGAAAATTT
AGTTGTTTAC ATGTTCTGAT TGATAAACTA GGGTTTATGA GTATTTTAGT GTAGTTAGAA TCGTAAACAT AGTAGGATTC
GAATATGATT CGTTACAAAT CGTTTGATGT TCTGTAACCT GAATCGGGTG ATTCGCGATT CAGTTTTCAT TACATACCAT
TCATGATGAA GGAACAAAAA CTGAAAAAAT TAGAAAGGAA CATATAGGAA AAGAAACCCA GCGAAGATGA AAGTTCAGTG
GAAAAGATGA ACGGCGGAGA AGATGAATGG GAATAATACT AAATAGGGAA CTGGATAAGA TAAATAGTGA GAAGGGAGAA
AACATCAGAT AATAGGACAA ACGCAGAAGA CAAACATTAA ATAGAGAACT GGAGAAGATA AATAGGGAGA AGATGAGAGA
GATGAACTGA GAAGAAGATT AGAGAAGGAA GAGAAAATCA ATCTGGAAGA AGATTAACCC ACGAACACCG GGAGAAGATG
AATAGGAGGA AGAAGAAAGA TCAAGAGAGA TCTGAAAAGT CTTTTTACAG TAATATTTTA AAATATTTTT TTTCATCTTT
TTATCTGTTC TCTGACAAAT TTAATCATAC AACTTACTTT CATATTTTGC AGTTACAGTC ATAATTTATA TATTATATTT
TATTTTTTAT AAAAAAGTAT TATTGTTTAA ATTAATATAA AGTGTTATAA CATGTTTTTT TTATAAAATT AGTTGTTGTT
TAATTATTTT TTTATTTAAT TTCTTTTAAA AAAATCTCAA TATTATTTTA ATTAGTATAT ATTTATTCTT ATATTTTTTA
TTTAAATTTT TTGAAATAAA ATACAATTGA GTTAGTTATA TTATTTTTTG AAAAAGTTAG TGATTGTTTT AGAATTTTGT
TTATTTTATC TTTTAGATTC TACAAGTTTC GTATCTTATG ATTCAAACCA AGATTTGATT CACGATTCAA AAGTATATGA
AAAACAATCC AAAATTCGAA TATCTGATAC AATAAACTAT AACCATTTTG AGGGTTTGCA CTCAAGTTTA GACTCTTGCA
GGTTGGGGTT TTTTGTTGTG TTGAATTGTG TGCTCACTTT GACATGGTAT TTGGGTGTGA TTTTTTGTTG CAGTGTTGGA
GACTATGCCG GAGAGGATGG GGGCAGCAAT TATGCTCAGC AGTTCAAGAA TTTGGTTAAG CTTGTGAAGA GAATCGATGG
GGACATCTTG TCTAAATTAG ATGGTTCTGC TAATGCCAGC TCATCAAGTA GAAGGTGAAT TTGGATCTGT GAACTTTGTC
CTTTTTTAAT GTTAACAGGG GGCGCACATC TTGTGTAACT CTGTGATAGT GAATGCTTCA ACTTTTCTGA ATTAGGCCAT
TGTGCAAGGT TTAAAACTTT TACATTTATA GTGAATGAAA ATATCAGTTT AAAGATTTTG ACACCATCAG GCTATTATAT
CCAAAATGCA TGATTGATGG TAATATATAA CTCAGTGGAT GAAAATTAAA TATCACTTAT TTTGTGGATA ACTAGTATTG
TGAGACGAAC CAGTAGTGTT ATTAAAGATT TTCAATGACC TGTGTTCAGC TTTCTGTTTT CGTAATGTAA TCATGTCAAT
TGAGAAAATC TACCCATTTA TTTTAGTGTT GGGTCGTTGT ATTGGATAAC TGTGGCATTA CCCCTTTATA TAAAAGCTTT
ATTGTAAAAT GTTTTTTATG AACTGGGATC CTCTTTGAAA AATTGTCTCC TTCTCTTCTA TACAGCTCAG AAACAAGGGA
CAGAACTAGA CAAGAGATAC CTGAGCCTGT TGGTGTATTT GGTGAACCTG CTGGTCCTCC AACTCAGTAA GGGTTTAATA
TTACTCTGTT GCTTTCGCCA TTTCAATGAT TTTTGTTACT GCTCAATGGA TTGATTATCA ATTATTTGAT TTTACACACT
TTTACTGTTG GCAAGTTTGA GCGTTAAAGT TCATAGATCT ATATGTCAGG GTCTAGTGTA GTTGATGTTC CGTACTTGAA
AATTATGAAA GCGGTCTGTG GTATGTACTT ATTAATTTTG GGATAATTTG TCTACGCATG CCTTTAATTA TGATGTCTTA
TACACGATGA TAGTTTCCTC TGATTCTATC AAGTTGAAGG ATGTCCTGAT ATGTCTTCAA ACAGTGCTTG TTTCTGCACC
TCAACTAAAC TAGTCGATTT GCACAAAATT ACCTGAACCT AGCCAAGTTC ACCTGACTCT CTAATCGGGA TTGAGTTTTC
TACAAATTGG TGTGTAGTTT ATGGACCCAT TGCACATTGT GAGATTTGAG ATGGACCATT TTAATGATCA GAGATCTTGG
GATTGATTGA TTTTGGTATG TGAGAACAGA TTCTACCGTG ATCATACTAG TATCTATGAT TGTAGTTTAC GAGCTTTGAA
CAATGTCCCC GAAACTTGCA CGAATGCACC ATTCCTATGT AGAAAAGGTA GCATTACAGA ACTAAATTAG ATCAACAGAC
TGATATGAAA GAACGATGTT CCCAGTTCCA ATAAAAATTC CCCTTTTGTC GCAAGTTATG ACCAAAATCC CCCACCCCAG
TTGAATGTAT ATATTTAGAC AAATTCATCA GATCTGCTTT CTCTTCATAA ATAAATTTCT CCCCTAATTC TTTAAATAAG
TCAGTCCGTG CTATTCCCTT GCAAGTCATG ATAATCTTAG GCCTCCATGA AAACTTCTAG GGTCCTTTTA GTTCCAGATT
ATTGGCAGCC GGGGCAGTTG AGCCCTGGTT CCTATCGTGC CACTTGCATG AATGCTTACG GTGCTAAATA TTCTTTTAAG
AAACTTTTTG ACTATGATGC CATATTATGA TTCTTGATCA ACGATGAATT TCTTCATTGT GAATTGAAGG ATGACAACAT
TCTGGCGCAA ATTATCCATG GACAGTGGTG AATACCACTA TTTCTTTTCT TCCTCCTGGA GAGGAATAAT TTACTGTTAA
TTACTCTCTG AGAAGACCCT TTTTCTGTTT TTCCTCCTAA CTGGCATACT TATTAGAAAT GGAACCATCA CTTGCCTACG
TGCCAAGCTG GTTTTAGTAT CACTCTTTTA AATGTTCTGC ATATAACTGC TACTTGCCTT TCTTGCTTCG TTCTTATTAA
TTGTGTTTTT ACTATTTTGT TTCCTTTTCT ACAGGATTAT TTTCCCTTCA GTTCCCATTG GTTCTGGTAG TGATCTTGTT
CCTGGGCCGC CTGCTGGAGT GCTTCCTTCA AGGTATTCTT ACCTGCATTG CTTTTTCATG CTCTTAACAT AATTGTTACA
CCCTCCTGTT TTTTCTAATC CTTTTACCCC TTGAAACTTT CCTCCCTTGA TATCAGGGGT GGTCATGGCA TTGGTGGGAG
CATGCATTTA GGTAAGTTTA ACATATCTCA ATTTAGTTTT ACGAAATTGG GTATTATTTT TTCATAACCG TAATTGTCGA
TACTAAGTTC AACATTTGGA ATCAGGGCCT AATGACCCCA TGTGGTTTGG TGGTATTGGT CGAGATCCTG CTTTTCCTGG
AGGAATGCCG TAAGTTGCTT AGATCTCTCT CTCTCTCTCT TTCTTTTCTT TTTTAAATTT CAGAGTTATC GGTGTAGTTA
AAGGCTGTGA AACCTAAAAG GCATGCCTTG CTAGCTGAGG TGAGGGTAGG GAAGGTTCCA ACTTCTTGCT GAGGCAATGT
CCATCACTTA CTCCTTGACT GTGTTTTCTG CGAGAGAGCC TGACCAATGG GCATTGGGTT TAATAGACCC CAGCTAATGA
AAAACACCAA CTTTCTTTAC GTAATAGAAG AGGGTGAATT GGTCTGTTTC ATATTTTTTG GAGTAGTTTT CCGTTCTTTT
TATGTGCTGA ATGGTTTCAA TCGTGTCACA ACTTGCATTA ATTTAAAAAA ATCATTTCGC CCCAAATATT TTAAAGAGTA
TTGTTTTTTT TCTCTATCTT TTATATTCTT TGGTTTCATA TCACAGTCGG CATGCATTAA CGTTTTTTAT TTAAAAGTTA
ATTTAACTAA AATTTATGAC TTTTCAACAA TAAAACTGAA TTTTATTAAG ATTTCTTACC TCTTTTTTAC TTTAACTGAA
ATAATGGAAA AAATGAGTAG TTTTGAAAAG AATGGAGAAA ATAAATGAGG AAGTGGATAG GGTAGGATGA ATTTTACCTT
TTTTGCTGTT TCTCTATATT CAGTGGGGCT TGGTGCCTTC CGCCTCGAGT GTTAAGTGCC TCTTGTGCCT AAAGGAATTA
ATGGTGCCAT TTGCTTTTGA CTGCCCTGTA TCTTGTACCT GTGGCTAGTT TTTAAGCTTA TCTGTGGTAT AAATCTATGT
AAATAGGGGT CTTCCTCCTG GCGCGCGTTT TGATCCATAT GGTCCTCCTG GTGTTCCTGG TTTTGAACCC AACCGATTTG
CAAGGTATGG CTCAAAGACT CGTGTATTTC ATATAAGTAT ATTGCTTTAA TAATGTCATT TGCATTTTTA ACCCATGTAC
GTATTCTATG TATTGTTCTC TTTTATATGC TGTTCTATTT TCGTGTCCAT CTTTTTCTCT TTTTATGTAT GTTAATGTTA
TTGTACATAG GATGTTGAAA GTGAAACCCG GTTGTAAGTC TGAACTGAGA TTATTGTTAA AGGGGTAGTG ATTCAGATAG
AAGAATTTAA AAAAAGTAGA GAGCGTGTTG AGGGTATTCG ATACCTTGAG TTTTAAAAAT AGATTATCTC GAAAACACGA
CCTTAAGCTC GGCTAAGTGT TAGTGCAAAT GTATAGCTGG GAAAATTGTT ATGCTTGCCT GATTTGAGGT TTTCTCAAAT
GATTAAAAGA ATCCCATTTT TGGTTTACAA GTATGAAGAT ATTTAAAAAT TAGTGAAATA AAATAAAATA TATGAACAGC
GTTTCTGACT CCCATGCTGC AGGAATCCTA GGAGACCAGG ATATGACGGT CATCCAGATC TGCAACATTT TCGAAGAGAC
GCTGATTCAG ACTACATATA GATATATATT ATATTTTAGT TGTCGCAATA TGGTCGGGTT CTATCTACGA ACAAGTTGTG
TCTAGTCAAT CTCCTAAAAC AATTTCAGCA GACACTATAC TCTGGATTAT TCTTCATGCG GACTTTCTTT CAGCGCTATT
AGCGTTAT

>Vigan.05G083700.01
GAATCACAGG GCACGCAACC ACAAAAAAAA ATGTGATTTA AGAAAGTCTT ATAAGATTTT TCTTTTTTTT TTTTATTGAA
AATACTGGAA GTCTCTCCAA TTCTTCCGAA GCACGTCTAA ACCCTCATCC ACCCCATTTT AATTTGATAG TAATTGAACT
ATTCAGTTTC AAAAGTTTTC TGAATTACAA CAGAAACACA AGAATTTGCC ATTGTTGAAA ACGTGGATGG CGAGTGAAAA
GTCGGTGCTT GCCGTGATCA GGGCCGCGAG GCCAACCTTC CGCAATCGAA ACGATAAAAT CGCCTTTGCC ATTCACTCCT
CCTTCCTAGC CTCCGGCTAT GTCCTTACCG CCACGGGTCC CCAGGCTCTC TCCGACAATG TGTTTTCTGA CCCATCAAAT
GATGAAGTAT CCGTTGATAA CTGGAACGAG CTAAACGAAG AGTACGCGTT CGTTTACGCG AATCCAGAAA AAGGGTCGGA
GAAAGTGCTT GTCAAGTGCC TTGTCATGAA TGACAAATTG CTAGTTCATG TTTTGTCTCA AGGGTCGTCC GAGCCTTTAA
GCCTCGAGAT TGATGTTGGA GACTATGCCG GAGAGGATGG GGGCAGCAAT TATGCTCAGC AGTTCAAGAA TTTGGTTAAG
CTTGTGAAGA GAATCGATGG GGACATCTTG TCTAAATTAG ATGGTTCTGC TAATGCCAGC TCATCAAGTA GAAGCTCAGA
AACAAGGGAC AGAACTAGAC AAGAGATACC TGAGCCTGTT GGTGTATTTG GTGAACCTGC TGGTCCTCCA ACTCAGATTA
TTTTCCCTTC AGTTCCCATT GGTTCTGGTA GTGATCTTGT TCCTGGGCCG CCTGCTGGAG TGCTTCCTTC AAGGGGTGGT
CATGGCATTG GTGGGAGCAT GCATTTAGGG CCTAATGACC CCATGTGGTT TGGTGGTATT GGTCGAGATC CTGCTTTTCC
TGGAGGAATG CCGGGTCTTC CTCCTGGCGC GCGTTTTGAT CCATATGGTC CTCCTGGTGT TCCTGGTTTT GAACCCAACC
GATTTGCAAG GAATCCTAGG AGACCAGGAT ATGACGGTCA TCCAGATCTG CAACATTTTC GAAGAGACGC TGATTCAGAC
TACATATAGA TATATATTAT ATTTTAGTTG TCGCAATATG GTCGGGTTCT ATCTACGAAC AAGTTGTGTC TAGTCAATCT
CCTAAAACAA TTTCAGCAGA CACTATACTC TGGATTATTC TTCATGCGGA CTTTCTTTCA GCGCTATTAG CGTTAT

>Vigan.05G083700.01
ATGGCGAGTG AAAAGTCGGT GCTTGCCGTG ATCAGGGCCG CGAGGCCAAC CTTCCGCAAT CGAAACGATA AAATCGCCTT
TGCCATTCAC TCCTCCTTCC TAGCCTCCGG CTATGTCCTT ACCGCCACGG GTCCCCAGGC TCTCTCCGAC AATGTGTTTT
CTGACCCATC AAATGATGAA GTATCCGTTG ATAACTGGAA CGAGCTAAAC GAAGAGTACG CGTTCGTTTA CGCGAATCCA
GAAAAAGGGT CGGAGAAAGT GCTTGTCAAG TGCCTTGTCA TGAATGACAA ATTGCTAGTT CATGTTTTGT CTCAAGGGTC
GTCCGAGCCT TTAAGCCTCG AGATTGATGT TGGAGACTAT GCCGGAGAGG ATGGGGGCAG CAATTATGCT CAGCAGTTCA
AGAATTTGGT TAAGCTTGTG AAGAGAATCG ATGGGGACAT CTTGTCTAAA TTAGATGGTT CTGCTAATGC CAGCTCATCA
AGTAGAAGCT CAGAAACAAG GGACAGAACT AGACAAGAGA TACCTGAGCC TGTTGGTGTA TTTGGTGAAC CTGCTGGTCC
TCCAACTCAG ATTATTTTCC CTTCAGTTCC CATTGGTTCT GGTAGTGATC TTGTTCCTGG GCCGCCTGCT GGAGTGCTTC
CTTCAAGGGG TGGTCATGGC ATTGGTGGGA GCATGCATTT AGGGCCTAAT GACCCCATGT GGTTTGGTGG TATTGGTCGA
GATCCTGCTT TTCCTGGAGG AATGCCGGGT CTTCCTCCTG GCGCGCGTTT TGATCCATAT GGTCCTCCTG GTGTTCCTGG
TTTTGAACCC AACCGATTTG CAAGGAATCC TAGGAGACCA GGATATGACG GTCATCCAGA TCTGCAACAT TTTCGAAGAG
ACGCTGATTC AGACTACATA TAG

>Vigan.05G083700.01
MASEKSVLAV IRAARPTFRN RNDKIAFAIH SSFLASGYVL TATGPQALSD NVFSDPSNDE VSVDNWNELN EEYAFVYANP
EKGSEKVLVK CLVMNDKLLV HVLSQGSSEP LSLEIDVGDY AGEDGGSNYA QQFKNLVKLV KRIDGDILSK LDGSANASSS
SRSSETRDRT RQEIPEPVGV FGEPAGPPTQ IIFPSVPIGS GSDLVPGPPA GVLPSRGGHG IGGSMHLGPN DPMWFGGIGR
DPAFPGGMPG LPPGARFDPY GPPGVPGFEP NRFARNPRRP GYDGHPDLQH FRRDADSDYI *