GBrowse Details

Vigan.05G034700.01

Basic Information:
Name: Vigan.05G034700.01
Multiple alignment
Variant Information
Position: Chr05:2257608..2260768 (+ strand)
Length: 3161
Functional Information:
Description: Similar to quinone oxidoreductase PIG3-like. [XP_004485715.1, Cicer arietinum]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747)
InterPro: Alcohol dehydrogenase superfamily, zinc-type (IPR002085)
GroES (chaperonin 10)-like (IPR011032)
Alcohol dehydrogenase, C-terminal (IPR013149)
Alcohol dehydrogenase GroES-like (IPR013154)
Quinone oxidoreductase PIG3 (IPR014189)
NAD(P)-binding domain (IPR016040)
Polyketide synthase, enoylreductase (IPR020843)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:199.06,83.95,54.41,65.35,83.41,75.43,88.45,61.29
Arabidopsis thaliana homolog: AT4G21580.1
Automatic updates:
Name: NM_001253315 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max quinone oxidoreductase PIG3-like (LOC100813682), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:2257608..2257972 (+ strand)
Length: 365
Type: five_prime_UTR
Position: Chr05:2257973..2258224 (+ strand)
Length: 252
Type: CDS
Position: Chr05:2258294..2258473 (+ strand)
Length: 180
Type: CDS
Position: Chr05:2258645..2258726 (+ strand)
Length: 82
Type: CDS
Position: Chr05:2258908..2259015 (+ strand)
Length: 108
Type: CDS
Position: Chr05:2259154..2259312 (+ strand)
Length: 159
Type: CDS
Position: Chr05:2260295..2260491 (+ strand)
Length: 197
Type: CDS
Position: Chr05:2260492..2260768 (+ strand)
Length: 277
Type: three_prime_UTR

>Vigan.05G034700.01 class=Sequence position=Chr05:2257608..2260768 (+ strand)
CACAAATAGG AATGTCCGAG ATATAATTTT TATTATAAAA TATTCAATAA CCAACATTTA CAATTATCCA ATTAAATCTA
TATTAAGTCT ATTTTGATGA AGGCATATTA TGATCTCTCA TATCTATATA CTCAGCTTTT AATAGAATTT TGGTTAGGGA
TTTAAATATT TAAGAATGTA GATTTTAAAC TTTTGGTGGG AAAAGAATGC TACAATTAGT AGATGTTACT GTATGAGGGA
ATACAGGATG ATAACTTTTT GCCAATATTA AATGTAATTA CTTCCTGTAT CATGTAGTAT AAATCGTGAA TAAGGAAGTA
GAGAGGGTGG GGTCTAAAAA GCGTGAAGAG AGGGAAGGGA AGAAGATGAA GGCTATAGTG ATAACGAGTC CGGGGGGTCC
TGAAGTGCTG CAGCTTCAAG AAGTTGAAGA TCCCCAACTC CAAGAGGACG AGGTTCTCAT CGGAGTCCAC GCTACTGCCC
TTAACAGAGC CGATACCCTC CAGAGGAAGG GCTTCCACCC TCCCCCTAAG GGTGCCAGTC CCTACCTGGG TCTCGAATGT
TCCGGAACAG TCCTATCTAT CGGTATAAAC GTTTCCAAGT GGAAAATCGG CGATCAGGTA TTCTTAACCT AATTCCCTTT
TCCAATATTT ACCGTTTCAC TGTTACTAAA AATTATTAAT TCACAGGTAT GTGCTCTTCT CGGCGGGGGA GGTTATGCCG
AGAAAGTTGC TGTTCCCGCC GGGCAAGTGC TTCCGATTCC ACCAGGTGTT TCCCTCACGG ATGCAGCTAG TTTTCCTGAG
GTCGCATGCA CTGTGTGGTC TACTATTTTC ATGACGAGTC GTTTATCTCA AGGGGAAACC CTGTTGGTAT TTCATCATAC
CCTAAATTCT ATATTACTAT TATTATCTTC ATTATATCAC CCTGACCGCT CAAGGATTTT CACTGGATCT TACCTAGAAA
ATGTATGATG ACCCTACTTT GCTACCTTAT TAAGAGTTAT GTTATGTTAA CTTTAATCTT TTCTATCTCA CTCTCAGGTT
CATGGTGGTT CTAGTGGGAT TGGTACATTT GCAATTCAGA TAGCTAAGTA TCGAGGGGCA AGAGTATTTG TTACTGCAGG
TTCGGTACTG ATTTATCCTG TTATTCAACA ATAGTCACTT TCCAATGTAT TCAAAATATG GAGAACTGAA GATCAGCTGT
CTGTCCGATA TATTGTTTAG TGAAACTGCT CGTTCTGGTT TATTTAAATT CCAAGCAGTG TTTCCCGAAA TATTAATCTA
GATTGGATAT TGCTTGACAG GGAGTGAGGA GAAGCTAGCT TTTTGTAAGA GTATTGGGGC TGATGTGGCT ATTAATTACA
AAACAGAAGA CTTTGTTGAG AGGGTAAAGG AGGAAACTGG TGGACAAGGT AGTATCTCTT GCTTGCATGA TGTGATTTTC
CTGTATTTCT TGGCGTTTAA TATTTTATGT AGTCGTACCT CTAATGTTTA TGATTTTTGT TCTGTAGAGA AGCATGGTGT
AACAGTGTAA TTGTGTGTGG TGGCAGGTGT TGATGTCATT CTTGATTGTA TGGGAGCATC CTACTATCAA AGAAATCTTG
ATAGCTTGAA TTTGGATGGA AGGCTTTTTA TTATTGGCTT ACAGGGTGGG GTTACTACTG AAGCAAATCT CCGCCCTTTA
CTTGCTAAGC GTCTCACAGT ACAAGGTATT GCAAACTTGG GAATATATTA TATTGCTCAA GTTTAGTTTT TAATGTAAAC
ATTTGTTTGT GTAGGAATAT CATGTTAAGA ATCAATTATG AATTGAAAGT TTCATATGAC ATTGAGTAAC TCATAATTTT
AGGGTTTTGG GTTAGAGGTG GTGTTATGAT ATCTTGTATG ACTACTCATA TTTTCATTGG TAGTGAATCT CTAGTTTATC
TCCCTAGAAG GATTTCAACG GTTTTAGAAT CCAAATATGA GTTAAAAGAC TTACATTGAG TGGAAAAGAG AAAGTTGAGT
AACAAACAAG GAAAAAAGAT CCCCAACACA ACATTATGGT TTTGGATTGA AGATGATGTC ATATCTCTTG TATGACAACC
GACGTCTCAT TGGTGGTGAA TTTCTCTAAT CTATCCTCTT AGAAAGATCC CAACATAACA GTGTCTGAAT AATTACAAAA
GTGCAAATCA GTTTATGAAA TTCTAAATTT TGGGTAGTGG GGTAATGAGG AAATGAAAAT AGTGTTAACT TTCTTAATTT
TCCAATGAGA CTTCTTACAA TTTCTGTTTG TGCTTCTCGT GCATTCTTAC TACTATATAT TGTTCTACAT TTCTGTGTAG
GAGCTTCTTC AAGTTTTTAA TCTTTGACTT GTTTATATGA ATGCGGTCAC TTTCTATTTA TAGTTACGTG CACCAAGAAT
AGGCGCACCC CTTTTGAATT TTACCTCTTT ATTTTCTTGA AAATGAGTTT TGTATGTCGA AGCATTAAGC TATGTTTGGA
AACTCATTAG GACTCATGCG TCAAATGGAA AACTTATAAA GGTGTTACTT TTGTGAACCT ACGTTAGCCT TTCTCCTATG
TTAACAGAAA CATACGCTTG GACAGCAAAC TTTTTCATTA TTTGAACGTG GGCTCTTTTG TGTGGAGTGA TACGATCTAA
CTTGGTAATT TTATATTTGT GCATCTCATA TGGTGGATGC ATTGTAGCGG CTGGCTTGCG TAATAGAAGT CTCGAAAATA
AAGCCGCGAT TATTAGCGAA GTGGAGAAGA ACGTTTGGCC TGCCATTGCC GAAGGAAAGG TTAAGCCTGT GGTCTACAAA
TCTTTCCCTC TTGCGGAGGC TGTTGATGCT CATCGGCTTA TGGAAAGCAG CAAGCATATT GGGAAGATAT TGCTTGTGCC
ATGATCGTTG TCATAAATAA TGTAGTTCAT GTTATATATT TGAATTCTGT GTTTAGACTT TTTTGTGATG ATCTCAGGTT
TCTAATAATG TTGTGCTTTG TTGTTAAAGC AGGAATTGAT ATAGCTGGTT CATTTCAAGA ATCCTACCGT ATGTGTGTAT
CAATTGATGT AACAAGAAAT GTGTTGTTAA AAGACACATT GTTGCAGCGG ACTGTTTCTT GTAAAATTGA ATACTTTTAA
CTTTTCAAGT AATATATATT GGTTTTCAAG TCTAAAAATA A

>Vigan.05G034700.01
CACAAATAGG AATGTCCGAG ATATAATTTT TATTATAAAA TATTCAATAA CCAACATTTA CAATTATCCA ATTAAATCTA
TATTAAGTCT ATTTTGATGA AGGCATATTA TGATCTCTCA TATCTATATA CTCAGCTTTT AATAGAATTT TGGTTAGGGA
TTTAAATATT TAAGAATGTA GATTTTAAAC TTTTGGTGGG AAAAGAATGC TACAATTAGT AGATGTTACT GTATGAGGGA
ATACAGGATG ATAACTTTTT GCCAATATTA AATGTAATTA CTTCCTGTAT CATGTAGTAT AAATCGTGAA TAAGGAAGTA
GAGAGGGTGG GGTCTAAAAA GCGTGAAGAG AGGGAAGGGA AGAAGATGAA GGCTATAGTG ATAACGAGTC CGGGGGGTCC
TGAAGTGCTG CAGCTTCAAG AAGTTGAAGA TCCCCAACTC CAAGAGGACG AGGTTCTCAT CGGAGTCCAC GCTACTGCCC
TTAACAGAGC CGATACCCTC CAGAGGAAGG GCTTCCACCC TCCCCCTAAG GGTGCCAGTC CCTACCTGGG TCTCGAATGT
TCCGGAACAG TCCTATCTAT CGGTATAAAC GTTTCCAAGT GGAAAATCGG CGATCAGGTA TGTGCTCTTC TCGGCGGGGG
AGGTTATGCC GAGAAAGTTG CTGTTCCCGC CGGGCAAGTG CTTCCGATTC CACCAGGTGT TTCCCTCACG GATGCAGCTA
GTTTTCCTGA GGTCGCATGC ACTGTGTGGT CTACTATTTT CATGACGAGT CGTTTATCTC AAGGGGAAAC CCTGTTGGTT
CATGGTGGTT CTAGTGGGAT TGGTACATTT GCAATTCAGA TAGCTAAGTA TCGAGGGGCA AGAGTATTTG TTACTGCAGG
GAGTGAGGAG AAGCTAGCTT TTTGTAAGAG TATTGGGGCT GATGTGGCTA TTAATTACAA AACAGAAGAC TTTGTTGAGA
GGGTAAAGGA GGAAACTGGT GGACAAGGTG TTGATGTCAT TCTTGATTGT ATGGGAGCAT CCTACTATCA AAGAAATCTT
GATAGCTTGA ATTTGGATGG AAGGCTTTTT ATTATTGGCT TACAGGGTGG GGTTACTACT GAAGCAAATC TCCGCCCTTT
ACTTGCTAAG CGTCTCACAG TACAAGCGGC TGGCTTGCGT AATAGAAGTC TCGAAAATAA AGCCGCGATT ATTAGCGAAG
TGGAGAAGAA CGTTTGGCCT GCCATTGCCG AAGGAAAGGT TAAGCCTGTG GTCTACAAAT CTTTCCCTCT TGCGGAGGCT
GTTGATGCTC ATCGGCTTAT GGAAAGCAGC AAGCATATTG GGAAGATATT GCTTGTGCCA TGATCGTTGT CATAAATAAT
GTAGTTCATG TTATATATTT GAATTCTGTG TTTAGACTTT TTTGTGATGA TCTCAGGTTT CTAATAATGT TGTGCTTTGT
TGTTAAAGCA GGAATTGATA TAGCTGGTTC ATTTCAAGAA TCCTACCGTA TGTGTGTATC AATTGATGTA ACAAGAAATG
TGTTGTTAAA AGACACATTG TTGCAGCGGA CTGTTTCTTG TAAAATTGAA TACTTTTAAC TTTTCAAGTA ATATATATTG
GTTTTCAAGT CTAAAAATAA 

>Vigan.05G034700.01
ATGAAGGCTA TAGTGATAAC GAGTCCGGGG GGTCCTGAAG TGCTGCAGCT TCAAGAAGTT GAAGATCCCC AACTCCAAGA
GGACGAGGTT CTCATCGGAG TCCACGCTAC TGCCCTTAAC AGAGCCGATA CCCTCCAGAG GAAGGGCTTC CACCCTCCCC
CTAAGGGTGC CAGTCCCTAC CTGGGTCTCG AATGTTCCGG AACAGTCCTA TCTATCGGTA TAAACGTTTC CAAGTGGAAA
ATCGGCGATC AGGTATGTGC TCTTCTCGGC GGGGGAGGTT ATGCCGAGAA AGTTGCTGTT CCCGCCGGGC AAGTGCTTCC
GATTCCACCA GGTGTTTCCC TCACGGATGC AGCTAGTTTT CCTGAGGTCG CATGCACTGT GTGGTCTACT ATTTTCATGA
CGAGTCGTTT ATCTCAAGGG GAAACCCTGT TGGTTCATGG TGGTTCTAGT GGGATTGGTA CATTTGCAAT TCAGATAGCT
AAGTATCGAG GGGCAAGAGT ATTTGTTACT GCAGGGAGTG AGGAGAAGCT AGCTTTTTGT AAGAGTATTG GGGCTGATGT
GGCTATTAAT TACAAAACAG AAGACTTTGT TGAGAGGGTA AAGGAGGAAA CTGGTGGACA AGGTGTTGAT GTCATTCTTG
ATTGTATGGG AGCATCCTAC TATCAAAGAA ATCTTGATAG CTTGAATTTG GATGGAAGGC TTTTTATTAT TGGCTTACAG
GGTGGGGTTA CTACTGAAGC AAATCTCCGC CCTTTACTTG CTAAGCGTCT CACAGTACAA GCGGCTGGCT TGCGTAATAG
AAGTCTCGAA AATAAAGCCG CGATTATTAG CGAAGTGGAG AAGAACGTTT GGCCTGCCAT TGCCGAAGGA AAGGTTAAGC
CTGTGGTCTA CAAATCTTTC CCTCTTGCGG AGGCTGTTGA TGCTCATCGG CTTATGGAAA GCAGCAAGCA TATTGGGAAG
ATATTGCTTG TGCCATGA

>Vigan.05G034700.01
MKAIVITSPG GPEVLQLQEV EDPQLQEDEV LIGVHATALN RADTLQRKGF HPPPKGASPY LGLECSGTVL SIGINVSKWK
IGDQVCALLG GGGYAEKVAV PAGQVLPIPP GVSLTDAASF PEVACTVWST IFMTSRLSQG ETLLVHGGSS GIGTFAIQIA
KYRGARVFVT AGSEEKLAFC KSIGADVAIN YKTEDFVERV KEETGGQGVD VILDCMGASY YQRNLDSLNL DGRLFIIGLQ
GGVTTEANLR PLLAKRLTVQ AAGLRNRSLE NKAAIISEVE KNVWPAIAEG KVKPVVYKSF PLAEAVDAHR LMESSKHIGK
ILLVP*